data_3SVG # _model_server_result.job_id TsAeM4tmyi6t82dhPKRebg _model_server_result.datetime_utc '2024-12-26 22:29:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3svg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3SVG # _exptl.entry_id 3SVG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SVG _cell.length_a 37.66 _cell.length_b 44.19 _cell.length_c 77.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SVG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3SVG _atom_sites.fract_transf_matrix[1][1] 0.026553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02263 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1 1 EDO EDO . C 2 EDO A 1 2 2 EDO EDO . D 2 EDO A 1 3 3 EDO EDO . E 3 ODR A 1 169 1 ODR ODR . F 4 HOH A 1 4 4 HOH HOH . F 4 HOH A 2 5 5 HOH HOH . F 4 HOH A 3 6 6 HOH HOH . F 4 HOH A 4 7 7 HOH HOH . F 4 HOH A 5 8 8 HOH HOH . F 4 HOH A 6 9 9 HOH HOH . F 4 HOH A 7 10 10 HOH HOH . F 4 HOH A 8 11 11 HOH HOH . F 4 HOH A 9 12 12 HOH HOH . F 4 HOH A 10 13 13 HOH HOH . F 4 HOH A 11 14 14 HOH HOH . F 4 HOH A 12 15 15 HOH HOH . F 4 HOH A 13 16 16 HOH HOH . F 4 HOH A 14 17 17 HOH HOH . F 4 HOH A 15 18 18 HOH HOH . F 4 HOH A 16 19 19 HOH HOH . F 4 HOH A 17 20 20 HOH HOH . F 4 HOH A 18 21 21 HOH HOH . F 4 HOH A 19 22 22 HOH HOH . F 4 HOH A 20 23 23 HOH HOH . F 4 HOH A 21 24 24 HOH HOH . F 4 HOH A 22 25 25 HOH HOH . F 4 HOH A 23 26 26 HOH HOH . F 4 HOH A 24 27 27 HOH HOH . F 4 HOH A 25 28 28 HOH HOH . F 4 HOH A 26 29 29 HOH HOH . F 4 HOH A 27 30 30 HOH HOH . F 4 HOH A 28 31 31 HOH HOH . F 4 HOH A 29 32 32 HOH HOH . F 4 HOH A 30 33 33 HOH HOH . F 4 HOH A 31 34 34 HOH HOH . F 4 HOH A 32 35 35 HOH HOH . F 4 HOH A 33 36 36 HOH HOH . F 4 HOH A 34 37 37 HOH HOH . F 4 HOH A 35 38 38 HOH HOH . F 4 HOH A 36 39 39 HOH HOH . F 4 HOH A 37 40 40 HOH HOH . F 4 HOH A 38 41 41 HOH HOH . F 4 HOH A 39 170 1 HOH HOH . F 4 HOH A 40 171 2 HOH HOH . F 4 HOH A 41 172 3 HOH HOH . F 4 HOH A 42 173 42 HOH HOH . F 4 HOH A 43 174 43 HOH HOH . F 4 HOH A 44 175 44 HOH HOH . F 4 HOH A 45 176 45 HOH HOH . F 4 HOH A 46 177 46 HOH HOH . F 4 HOH A 47 178 47 HOH HOH . F 4 HOH A 48 179 48 HOH HOH . F 4 HOH A 49 180 49 HOH HOH . F 4 HOH A 50 181 50 HOH HOH . F 4 HOH A 51 182 51 HOH HOH . F 4 HOH A 52 183 52 HOH HOH . F 4 HOH A 53 184 53 HOH HOH . F 4 HOH A 54 185 54 HOH HOH . F 4 HOH A 55 186 55 HOH HOH . F 4 HOH A 56 187 56 HOH HOH . F 4 HOH A 57 188 58 HOH HOH . F 4 HOH A 58 189 59 HOH HOH . F 4 HOH A 59 190 60 HOH HOH . F 4 HOH A 60 191 61 HOH HOH . F 4 HOH A 61 192 62 HOH HOH . F 4 HOH A 62 193 63 HOH HOH . F 4 HOH A 63 194 64 HOH HOH . F 4 HOH A 64 195 65 HOH HOH . F 4 HOH A 65 196 66 HOH HOH . F 4 HOH A 66 197 67 HOH HOH . F 4 HOH A 67 198 68 HOH HOH . F 4 HOH A 68 199 69 HOH HOH . F 4 HOH A 69 200 70 HOH HOH . F 4 HOH A 70 201 71 HOH HOH . F 4 HOH A 71 202 72 HOH HOH . F 4 HOH A 72 203 73 HOH HOH . F 4 HOH A 73 204 74 HOH HOH . F 4 HOH A 74 205 75 HOH HOH . F 4 HOH A 75 206 76 HOH HOH . F 4 HOH A 76 207 77 HOH HOH . F 4 HOH A 77 208 78 HOH HOH . F 4 HOH A 78 209 79 HOH HOH . F 4 HOH A 79 210 80 HOH HOH . F 4 HOH A 80 211 81 HOH HOH . F 4 HOH A 81 212 82 HOH HOH . F 4 HOH A 82 213 83 HOH HOH . F 4 HOH A 83 214 84 HOH HOH . F 4 HOH A 84 215 85 HOH HOH . F 4 HOH A 85 216 86 HOH HOH . F 4 HOH A 86 217 87 HOH HOH . F 4 HOH A 87 218 88 HOH HOH . F 4 HOH A 88 219 89 HOH HOH . F 4 HOH A 89 220 90 HOH HOH . F 4 HOH A 90 221 91 HOH HOH . F 4 HOH A 91 222 92 HOH HOH . F 4 HOH A 92 223 93 HOH HOH . F 4 HOH A 93 224 94 HOH HOH . F 4 HOH A 94 225 95 HOH HOH . F 4 HOH A 95 226 96 HOH HOH . F 4 HOH A 96 227 97 HOH HOH . F 4 HOH A 97 228 98 HOH HOH . F 4 HOH A 98 229 99 HOH HOH . F 4 HOH A 99 230 100 HOH HOH . F 4 HOH A 100 231 101 HOH HOH . F 4 HOH A 101 232 102 HOH HOH . F 4 HOH A 102 233 103 HOH HOH . F 4 HOH A 103 234 104 HOH HOH . F 4 HOH A 104 235 105 HOH HOH . F 4 HOH A 105 236 106 HOH HOH . F 4 HOH A 106 237 107 HOH HOH . F 4 HOH A 107 238 108 HOH HOH . F 4 HOH A 108 239 110 HOH HOH . F 4 HOH A 109 240 111 HOH HOH . F 4 HOH A 110 241 112 HOH HOH . F 4 HOH A 111 242 113 HOH HOH . F 4 HOH A 112 243 114 HOH HOH . F 4 HOH A 113 244 115 HOH HOH . F 4 HOH A 114 245 116 HOH HOH . F 4 HOH A 115 246 117 HOH HOH . F 4 HOH A 116 247 118 HOH HOH . F 4 HOH A 117 248 119 HOH HOH . F 4 HOH A 118 249 120 HOH HOH . F 4 HOH A 119 250 121 HOH HOH . F 4 HOH A 120 251 122 HOH HOH . F 4 HOH A 121 252 123 HOH HOH . F 4 HOH A 122 253 124 HOH HOH . F 4 HOH A 123 254 125 HOH HOH . F 4 HOH A 124 255 126 HOH HOH . F 4 HOH A 125 256 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 42.717 20.534 6.639 1 18.51 ? C1 EDO 1 A 1 HETATM 2 O O1 EDO . . . B 2 41.535 19.805 7.014 1 16.72 ? O1 EDO 1 A 1 HETATM 3 C C2 EDO . . . B 2 43.67 19.694 5.803 1 23.5 ? C2 EDO 1 A 1 HETATM 4 O O2 EDO . . . B 2 44.146 18.551 6.534 1 23.29 ? O2 EDO 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #