data_3SVP
#
_model_server_result.job_id            OUeVF5KYrSU0ncStjcJR7A 
_model_server_result.datetime_utc      '2024-11-18 11:39:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3svp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":900}' 
#
_entry.id    3SVP 
#
_exptl.entry_id    3SVP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SVP 
_cell.length_a            51.767 
_cell.length_b            111.152 
_cell.length_c            164.282 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SVP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc4 G ZN ZN . A ZN 900 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc5 G ZN ZN . A ZN 900 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3SVP 
_atom_sites.fract_transf_matrix[1][1]    0.019317 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008997 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006087 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 750 750 HEM HEM . 
D 3 H4B A 1 760 760 H4B BH4 . 
E 4 ACT A 1 860 860 ACT ACT . 
F 5 JK5 A 1 800 800 JK5 JK5 . 
G 6 ZN A 1 900 900 ZN ZN . 
H 2 HEM B 1 750 750 HEM HEM . 
I 3 H4B B 1 760 760 H4B BH4 . 
J 5 JK5 B 1 800 800 JK5 JK5 . 
K 4 ACT B 1 860 860 ACT ACT . 
L 7 HOH A 1 1 1 HOH HOH . 
L 7 HOH A 2 5 5 HOH HOH . 
L 7 HOH A 3 9 9 HOH HOH . 
L 7 HOH A 4 10 10 HOH HOH . 
L 7 HOH A 5 11 11 HOH HOH . 
L 7 HOH A 6 13 13 HOH HOH . 
L 7 HOH A 7 17 17 HOH HOH . 
L 7 HOH A 8 22 22 HOH HOH . 
L 7 HOH A 9 23 23 HOH HOH . 
L 7 HOH A 10 26 26 HOH HOH . 
L 7 HOH A 11 27 27 HOH HOH . 
L 7 HOH A 12 30 30 HOH HOH . 
L 7 HOH A 13 32 32 HOH HOH . 
L 7 HOH A 14 34 34 HOH HOH . 
L 7 HOH A 15 40 40 HOH HOH . 
L 7 HOH A 16 43 43 HOH HOH . 
L 7 HOH A 17 45 45 HOH HOH . 
L 7 HOH A 18 46 46 HOH HOH . 
L 7 HOH A 19 49 49 HOH HOH . 
L 7 HOH A 20 50 50 HOH HOH . 
L 7 HOH A 21 55 55 HOH HOH . 
L 7 HOH A 22 56 56 HOH HOH . 
L 7 HOH A 23 58 58 HOH HOH . 
L 7 HOH A 24 60 60 HOH HOH . 
L 7 HOH A 25 61 61 HOH HOH . 
L 7 HOH A 26 65 65 HOH HOH . 
L 7 HOH A 27 69 69 HOH HOH . 
L 7 HOH A 28 72 72 HOH HOH . 
L 7 HOH A 29 76 76 HOH HOH . 
L 7 HOH A 30 84 84 HOH HOH . 
L 7 HOH A 31 90 90 HOH HOH . 
L 7 HOH A 32 91 91 HOH HOH . 
L 7 HOH A 33 93 93 HOH HOH . 
L 7 HOH A 34 94 94 HOH HOH . 
L 7 HOH A 35 95 95 HOH HOH . 
L 7 HOH A 36 97 97 HOH HOH . 
L 7 HOH A 37 98 98 HOH HOH . 
L 7 HOH A 38 100 100 HOH HOH . 
L 7 HOH A 39 103 103 HOH HOH . 
L 7 HOH A 40 106 106 HOH HOH . 
L 7 HOH A 41 108 108 HOH HOH . 
L 7 HOH A 42 109 109 HOH HOH . 
L 7 HOH A 43 110 110 HOH HOH . 
L 7 HOH A 44 112 112 HOH HOH . 
L 7 HOH A 45 115 115 HOH HOH . 
L 7 HOH A 46 118 118 HOH HOH . 
L 7 HOH A 47 120 120 HOH HOH . 
L 7 HOH A 48 126 126 HOH HOH . 
L 7 HOH A 49 130 130 HOH HOH . 
L 7 HOH A 50 133 133 HOH HOH . 
L 7 HOH A 51 135 135 HOH HOH . 
L 7 HOH A 52 136 136 HOH HOH . 
L 7 HOH A 53 137 137 HOH HOH . 
L 7 HOH A 54 138 138 HOH HOH . 
L 7 HOH A 55 140 140 HOH HOH . 
L 7 HOH A 56 141 141 HOH HOH . 
L 7 HOH A 57 142 142 HOH HOH . 
L 7 HOH A 58 144 144 HOH HOH . 
L 7 HOH A 59 145 145 HOH HOH . 
L 7 HOH A 60 150 150 HOH HOH . 
L 7 HOH A 61 151 151 HOH HOH . 
L 7 HOH A 62 152 152 HOH HOH . 
L 7 HOH A 63 153 153 HOH HOH . 
L 7 HOH A 64 161 161 HOH HOH . 
L 7 HOH A 65 164 164 HOH HOH . 
L 7 HOH A 66 167 167 HOH HOH . 
L 7 HOH A 67 169 169 HOH HOH . 
L 7 HOH A 68 170 170 HOH HOH . 
L 7 HOH A 69 171 171 HOH HOH . 
L 7 HOH A 70 176 176 HOH HOH . 
L 7 HOH A 71 177 177 HOH HOH . 
L 7 HOH A 72 178 178 HOH HOH . 
L 7 HOH A 73 179 179 HOH HOH . 
L 7 HOH A 74 183 183 HOH HOH . 
L 7 HOH A 75 186 186 HOH HOH . 
L 7 HOH A 76 190 190 HOH HOH . 
L 7 HOH A 77 194 194 HOH HOH . 
L 7 HOH A 78 195 195 HOH HOH . 
L 7 HOH A 79 198 198 HOH HOH . 
L 7 HOH A 80 201 201 HOH HOH . 
L 7 HOH A 81 202 202 HOH HOH . 
L 7 HOH A 82 203 203 HOH HOH . 
L 7 HOH A 83 206 206 HOH HOH . 
L 7 HOH A 84 207 207 HOH HOH . 
L 7 HOH A 85 208 208 HOH HOH . 
L 7 HOH A 86 209 209 HOH HOH . 
L 7 HOH A 87 210 210 HOH HOH . 
L 7 HOH A 88 211 211 HOH HOH . 
L 7 HOH A 89 212 212 HOH HOH . 
L 7 HOH A 90 213 213 HOH HOH . 
L 7 HOH A 91 214 214 HOH HOH . 
L 7 HOH A 92 215 215 HOH HOH . 
L 7 HOH A 93 216 216 HOH HOH . 
L 7 HOH A 94 217 217 HOH HOH . 
L 7 HOH A 95 218 218 HOH HOH . 
L 7 HOH A 96 219 219 HOH HOH . 
L 7 HOH A 97 220 220 HOH HOH . 
L 7 HOH A 98 221 221 HOH HOH . 
M 7 HOH B 1 2 2 HOH HOH . 
M 7 HOH B 2 3 3 HOH HOH . 
M 7 HOH B 3 4 4 HOH HOH . 
M 7 HOH B 4 6 6 HOH HOH . 
M 7 HOH B 5 7 7 HOH HOH . 
M 7 HOH B 6 8 8 HOH HOH . 
M 7 HOH B 7 12 12 HOH HOH . 
M 7 HOH B 8 14 14 HOH HOH . 
M 7 HOH B 9 15 15 HOH HOH . 
M 7 HOH B 10 16 16 HOH HOH . 
M 7 HOH B 11 18 18 HOH HOH . 
M 7 HOH B 12 19 19 HOH HOH . 
M 7 HOH B 13 20 20 HOH HOH . 
M 7 HOH B 14 21 21 HOH HOH . 
M 7 HOH B 15 24 24 HOH HOH . 
M 7 HOH B 16 25 25 HOH HOH . 
M 7 HOH B 17 28 28 HOH HOH . 
M 7 HOH B 18 29 29 HOH HOH . 
M 7 HOH B 19 31 31 HOH HOH . 
M 7 HOH B 20 33 33 HOH HOH . 
M 7 HOH B 21 35 35 HOH HOH . 
M 7 HOH B 22 36 36 HOH HOH . 
M 7 HOH B 23 37 37 HOH HOH . 
M 7 HOH B 24 38 38 HOH HOH . 
M 7 HOH B 25 39 39 HOH HOH . 
M 7 HOH B 26 41 41 HOH HOH . 
M 7 HOH B 27 42 42 HOH HOH . 
M 7 HOH B 28 44 44 HOH HOH . 
M 7 HOH B 29 47 47 HOH HOH . 
M 7 HOH B 30 48 48 HOH HOH . 
M 7 HOH B 31 51 51 HOH HOH . 
M 7 HOH B 32 52 52 HOH HOH . 
M 7 HOH B 33 53 53 HOH HOH . 
M 7 HOH B 34 54 54 HOH HOH . 
M 7 HOH B 35 57 57 HOH HOH . 
M 7 HOH B 36 59 59 HOH HOH . 
M 7 HOH B 37 62 62 HOH HOH . 
M 7 HOH B 38 63 63 HOH HOH . 
M 7 HOH B 39 64 64 HOH HOH . 
M 7 HOH B 40 66 66 HOH HOH . 
M 7 HOH B 41 67 67 HOH HOH . 
M 7 HOH B 42 68 68 HOH HOH . 
M 7 HOH B 43 70 70 HOH HOH . 
M 7 HOH B 44 71 71 HOH HOH . 
M 7 HOH B 45 73 73 HOH HOH . 
M 7 HOH B 46 74 74 HOH HOH . 
M 7 HOH B 47 75 75 HOH HOH . 
M 7 HOH B 48 77 77 HOH HOH . 
M 7 HOH B 49 78 78 HOH HOH . 
M 7 HOH B 50 79 79 HOH HOH . 
M 7 HOH B 51 80 80 HOH HOH . 
M 7 HOH B 52 81 81 HOH HOH . 
M 7 HOH B 53 82 82 HOH HOH . 
M 7 HOH B 54 83 83 HOH HOH . 
M 7 HOH B 55 85 85 HOH HOH . 
M 7 HOH B 56 86 86 HOH HOH . 
M 7 HOH B 57 87 87 HOH HOH . 
M 7 HOH B 58 88 88 HOH HOH . 
M 7 HOH B 59 89 89 HOH HOH . 
M 7 HOH B 60 92 92 HOH HOH . 
M 7 HOH B 61 96 96 HOH HOH . 
M 7 HOH B 62 99 99 HOH HOH . 
M 7 HOH B 63 101 101 HOH HOH . 
M 7 HOH B 64 102 102 HOH HOH . 
M 7 HOH B 65 104 104 HOH HOH . 
M 7 HOH B 66 105 105 HOH HOH . 
M 7 HOH B 67 107 107 HOH HOH . 
M 7 HOH B 68 111 111 HOH HOH . 
M 7 HOH B 69 113 113 HOH HOH . 
M 7 HOH B 70 114 114 HOH HOH . 
M 7 HOH B 71 116 116 HOH HOH . 
M 7 HOH B 72 117 117 HOH HOH . 
M 7 HOH B 73 119 119 HOH HOH . 
M 7 HOH B 74 121 121 HOH HOH . 
M 7 HOH B 75 122 122 HOH HOH . 
M 7 HOH B 76 123 123 HOH HOH . 
M 7 HOH B 77 124 124 HOH HOH . 
M 7 HOH B 78 125 125 HOH HOH . 
M 7 HOH B 79 127 127 HOH HOH . 
M 7 HOH B 80 128 128 HOH HOH . 
M 7 HOH B 81 129 129 HOH HOH . 
M 7 HOH B 82 131 131 HOH HOH . 
M 7 HOH B 83 132 132 HOH HOH . 
M 7 HOH B 84 134 134 HOH HOH . 
M 7 HOH B 85 139 139 HOH HOH . 
M 7 HOH B 86 143 143 HOH HOH . 
M 7 HOH B 87 146 146 HOH HOH . 
M 7 HOH B 88 147 147 HOH HOH . 
M 7 HOH B 89 148 148 HOH HOH . 
M 7 HOH B 90 149 149 HOH HOH . 
M 7 HOH B 91 154 154 HOH HOH . 
M 7 HOH B 92 155 155 HOH HOH . 
M 7 HOH B 93 156 156 HOH HOH . 
M 7 HOH B 94 157 157 HOH HOH . 
M 7 HOH B 95 158 158 HOH HOH . 
M 7 HOH B 96 159 159 HOH HOH . 
M 7 HOH B 97 160 160 HOH HOH . 
M 7 HOH B 98 162 162 HOH HOH . 
M 7 HOH B 99 163 163 HOH HOH . 
M 7 HOH B 100 165 165 HOH HOH . 
M 7 HOH B 101 166 166 HOH HOH . 
M 7 HOH B 102 168 168 HOH HOH . 
M 7 HOH B 103 172 172 HOH HOH . 
M 7 HOH B 104 173 173 HOH HOH . 
M 7 HOH B 105 174 174 HOH HOH . 
M 7 HOH B 106 175 175 HOH HOH . 
M 7 HOH B 107 180 180 HOH HOH . 
M 7 HOH B 108 181 181 HOH HOH . 
M 7 HOH B 109 182 182 HOH HOH . 
M 7 HOH B 110 184 184 HOH HOH . 
M 7 HOH B 111 185 185 HOH HOH . 
M 7 HOH B 112 187 187 HOH HOH . 
M 7 HOH B 113 188 188 HOH HOH . 
M 7 HOH B 114 189 189 HOH HOH . 
M 7 HOH B 115 191 191 HOH HOH . 
M 7 HOH B 116 192 192 HOH HOH . 
M 7 HOH B 117 193 193 HOH HOH . 
M 7 HOH B 118 196 196 HOH HOH . 
M 7 HOH B 119 197 197 HOH HOH . 
M 7 HOH B 120 199 199 HOH HOH . 
M 7 HOH B 121 200 200 HOH HOH . 
M 7 HOH B 122 204 204 HOH HOH . 
M 7 HOH B 123 205 205 HOH HOH . 
M 7 HOH B 124 222 222 HOH HOH . 
M 7 HOH B 125 223 223 HOH HOH . 
M 7 HOH B 126 224 224 HOH HOH . 
M 7 HOH B 127 225 225 HOH HOH . 
M 7 HOH B 128 226 226 HOH HOH . 
M 7 HOH B 129 227 227 HOH HOH . 
M 7 HOH B 130 228 228 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               8.983 
_atom_site.Cartn_y               16.005 
_atom_site.Cartn_z               41.165 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        48.09 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           900 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           357 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#