data_3SWN
#
_model_server_result.job_id            GHQyJFY7w_jdE5hLXg5weA 
_model_server_result.datetime_utc      '2024-10-10 06:21:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3swn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":77}' 
#
_entry.id    3SWN 
#
_exptl.entry_id    3SWN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.01 
_cell.angle_gamma         90 
_cell.entry_id            3SWN 
_cell.length_a            79.53 
_cell.length_b            63.1 
_cell.length_c            92.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SWN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA hexameric 6 author_and_software_defined_assembly 1 
PISA hexameric 6 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,M,N,O,P,Q,R,S,T,CA,DA,EA,FA,GA 1 1 
G,H,I,J,K,L,U,V,W,X,Y,Z,AA,BA,HA,IA,JA,KA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 66 C ASP 62 1_555 M ZN ZN . C ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc2 B OE1 GLU 51 A GLU 49 1_555 N ZN ZN . A ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
metalc ? metalc3 B NE2 HIS 62 A HIS 60 1_555 N ZN ZN . A ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc4 N ZN ZN . A ZN 81 1_555 C OH TYR 71 B TYR 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc5 C SG CYS 35 B CYS 33 1_555 P ZN ZN . B ZN 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? 
metalc ? metalc6 C SG CYS 35 B CYS 33 1_555 R ZN ZN . F ZN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc7 C OD1 ASP 61 B ASP 59 1_555 O ZN ZN . B ZN 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? 
metalc ? metalc8 O ZN ZN . B ZN 76 1_555 EA O HOH . B HOH 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
metalc ? metalc9 O ZN ZN . B ZN 76 1_555 EA O HOH . B HOH 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
metalc ? metalc10 O ZN ZN . B ZN 76 1_555 EA O HOH . B HOH 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? 
metalc ? metalc11 P ZN ZN . B ZN 77 1_555 EA O HOH . B HOH 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc12 D OD2 ASP 31 F ASP 27 1_555 R ZN ZN . F ZN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? 
metalc ? metalc13 D OD2 ASP 67 F ASP 63 1_555 Q ZN ZN . F ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc14 E OE2 GLU 11 D GLU 9 1_555 T ZN ZN . D ZN 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc15 E OE1 GLU 51 D GLU 49 1_555 S ZN ZN . D ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc16 E NE2 HIS 62 D HIS 60 1_555 S ZN ZN . D ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
metalc ? metalc17 S ZN ZN . D ZN 81 1_555 F OH TYR 71 E TYR 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc18 G OD2 ASP 66 O ASP 62 1_555 U ZN ZN . O ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc19 H OE1 GLU 51 P GLU 49 1_555 V ZN ZN . P ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
metalc ? metalc20 H NE2 HIS 62 P HIS 60 1_555 V ZN ZN . P ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc21 V ZN ZN . P ZN 81 1_555 I OH TYR 71 Q TYR 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc22 I SG CYS 35 Q CYS 33 1_555 Y ZN ZN . Q ZN 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? 
metalc ? metalc23 I SG CYS 35 Q CYS 33 1_555 AA ZN ZN . R ZN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
metalc ? metalc24 I OD1 ASP 61 Q ASP 59 1_555 X ZN ZN . Q ZN 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc25 I OD2 ASP 61 Q ASP 59 1_555 X ZN ZN . Q ZN 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? 
metalc ? metalc26 X ZN ZN . Q ZN 76 1_555 IA O HOH . Q HOH 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? 
metalc ? metalc27 X ZN ZN . Q ZN 76 1_555 IA O HOH . Q HOH 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc28 X ZN ZN . Q ZN 76 1_555 IA O HOH . Q HOH 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc29 Y ZN ZN . Q ZN 77 1_555 IA O HOH . Q HOH 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc30 Y ZN ZN . Q ZN 77 1_555 IA O HOH . Q HOH 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc31 J OD2 ASP 31 R ASP 27 1_555 AA ZN ZN . R ZN 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc32 J OD2 ASP 67 R ASP 63 1_555 Z ZN ZN . R ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc33 K OE1 GLU 51 S GLU 49 1_555 BA ZN ZN . S ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc34 K NE2 HIS 62 S HIS 60 1_555 BA ZN ZN . S ZN 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc35 BA ZN ZN . S ZN 81 1_555 L OH TYR 71 T TYR 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3SWN 
_atom_sites.fract_transf_matrix[1][1]    0.012574 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000002 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015848 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010781 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 4 ZN C 1 114 11 ZN ZN . 
N 4 ZN A 1 81 7 ZN ZN . 
O 4 ZN B 1 76 9 ZN ZN . 
P 4 ZN B 1 77 16 ZN ZN . 
Q 4 ZN F 1 114 5 ZN ZN . 
R 4 ZN F 1 115 6 ZN ZN . 
S 4 ZN D 1 81 1 ZN ZN . 
T 4 ZN D 1 82 12 ZN ZN . 
U 4 ZN O 1 114 8 ZN ZN . 
V 4 ZN P 1 81 2 ZN ZN . 
W 4 ZN P 1 82 13 ZN ZN . 
X 4 ZN Q 1 76 14 ZN ZN . 
Y 4 ZN Q 1 77 15 ZN ZN . 
Z 4 ZN R 1 114 17 ZN ZN . 
AA 4 ZN R 1 115 18 ZN ZN . 
BA 4 ZN S 1 81 3 ZN ZN . 
CA 5 HOH C 1 115 33 HOH HOH . 
DA 5 HOH A 1 82 24 HOH HOH . 
EA 5 HOH B 1 78 5 HOH HOH . 
EA 5 HOH B 2 79 14 HOH HOH . 
EA 5 HOH B 3 80 29 HOH HOH . 
EA 5 HOH B 4 81 30 HOH HOH . 
EA 5 HOH B 5 82 31 HOH HOH . 
EA 5 HOH B 6 83 34 HOH HOH . 
FA 5 HOH F 1 116 7 HOH HOH . 
FA 5 HOH F 2 117 8 HOH HOH . 
GA 5 HOH E 1 76 19 HOH HOH . 
GA 5 HOH E 2 77 37 HOH HOH . 
HA 5 HOH P 1 83 25 HOH HOH . 
HA 5 HOH P 2 84 32 HOH HOH . 
IA 5 HOH Q 1 78 1 HOH HOH . 
IA 5 HOH Q 2 79 2 HOH HOH . 
IA 5 HOH Q 3 80 17 HOH HOH . 
IA 5 HOH Q 4 81 21 HOH HOH . 
IA 5 HOH Q 5 82 28 HOH HOH . 
IA 5 HOH Q 6 83 35 HOH HOH . 
IA 5 HOH Q 7 84 40 HOH HOH . 
IA 5 HOH Q 8 85 41 HOH HOH . 
JA 5 HOH R 1 116 9 HOH HOH . 
KA 5 HOH T 1 76 36 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         Y 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -7.771 
_atom_site.Cartn_y               6.436 
_atom_site.Cartn_z               19.176 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        69.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           77 
_atom_site.auth_asym_id          Q 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#