data_3SXC
#
_model_server_result.job_id            0Z5lywNXZku2r1KFI8YjvA 
_model_server_result.datetime_utc      '2024-11-07 12:41:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sxc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2}' 
#
_entry.id    3SXC 
#
_exptl.entry_id    3SXC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-galactopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3SXC 
_cell.length_a            52.55 
_cell.length_b            149.88 
_cell.length_c            78.81 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SXC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.55 0 39.405 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O1A UDP . A UDP 1 1_555 D MN MN . A MN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc2 B O3B UDP . A UDP 1 1_555 D MN MN . A MN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc3 D MN MN . A MN 8 1_555 A OD2 ASP 150 A ASP 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc4 D MN MN . A MN 8 1_555 A OD1 ASP 152 A ASP 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GAL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-galactopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-galactose;D-galactose;galactose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GAL sing 83 n n 
C1 O1 GAL sing 84 n n 
C1 O5 GAL sing 85 n n 
C1 H1 GAL sing 86 n n 
C2 C3 GAL sing 87 n n 
C2 O2 GAL sing 88 n n 
C2 H2 GAL sing 89 n n 
C3 C4 GAL sing 90 n n 
C3 O3 GAL sing 91 n n 
C3 H3 GAL sing 92 n n 
C4 C5 GAL sing 93 n n 
C4 O4 GAL sing 94 n n 
C4 H4 GAL sing 95 n n 
C5 C6 GAL sing 96 n n 
C5 O5 GAL sing 97 n n 
C5 H5 GAL sing 98 n n 
C6 O6 GAL sing 99 n n 
C6 H61 GAL sing 100 n n 
C6 H62 GAL sing 101 n n 
O1 HO1 GAL sing 102 n n 
O2 HO2 GAL sing 103 n n 
O3 HO3 GAL sing 104 n n 
O4 HO4 GAL sing 105 n n 
O6 HO6 GAL sing 106 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GAL b-D-galactopyranose 'COMMON NAME' GMML 1 
GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3SXC 
_atom_sites.fract_transf_matrix[1][1]    0.019029 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006672 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012689 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UDP A 1 1 1 UDP UDP . 
C 3 GAL A 1 2 2 GAL GAL . 
D 4 MN A 1 8 8 MN MN . 
E 5 PEG A 1 9 9 PEG PEG . 
F 6 HOH A 1 3 3 HOH HOH . 
F 6 HOH A 2 4 4 HOH HOH . 
F 6 HOH A 3 5 5 HOH HOH . 
F 6 HOH A 4 6 6 HOH HOH . 
F 6 HOH A 5 7 7 HOH HOH . 
F 6 HOH A 6 10 10 HOH HOH . 
F 6 HOH A 7 11 11 HOH HOH . 
F 6 HOH A 8 12 12 HOH HOH . 
F 6 HOH A 9 13 13 HOH HOH . 
F 6 HOH A 10 14 14 HOH HOH . 
F 6 HOH A 11 15 15 HOH HOH . 
F 6 HOH A 12 16 16 HOH HOH . 
F 6 HOH A 13 17 17 HOH HOH . 
F 6 HOH A 14 18 18 HOH HOH . 
F 6 HOH A 15 19 19 HOH HOH . 
F 6 HOH A 16 20 20 HOH HOH . 
F 6 HOH A 17 21 21 HOH HOH . 
F 6 HOH A 18 22 22 HOH HOH . 
F 6 HOH A 19 23 23 HOH HOH . 
F 6 HOH A 20 24 24 HOH HOH . 
F 6 HOH A 21 25 25 HOH HOH . 
F 6 HOH A 22 26 26 HOH HOH . 
F 6 HOH A 23 27 27 HOH HOH . 
F 6 HOH A 24 28 28 HOH HOH . 
F 6 HOH A 25 29 29 HOH HOH . 
F 6 HOH A 26 30 30 HOH HOH . 
F 6 HOH A 27 31 31 HOH HOH . 
F 6 HOH A 28 32 32 HOH HOH . 
F 6 HOH A 29 33 33 HOH HOH . 
F 6 HOH A 30 34 34 HOH HOH . 
F 6 HOH A 31 35 35 HOH HOH . 
F 6 HOH A 32 36 36 HOH HOH . 
F 6 HOH A 33 37 37 HOH HOH . 
F 6 HOH A 34 38 38 HOH HOH . 
F 6 HOH A 35 39 39 HOH HOH . 
F 6 HOH A 36 40 40 HOH HOH . 
F 6 HOH A 37 41 41 HOH HOH . 
F 6 HOH A 38 42 42 HOH HOH . 
F 6 HOH A 39 43 43 HOH HOH . 
F 6 HOH A 40 44 44 HOH HOH . 
F 6 HOH A 41 45 45 HOH HOH . 
F 6 HOH A 42 46 46 HOH HOH . 
F 6 HOH A 43 47 47 HOH HOH . 
F 6 HOH A 44 48 48 HOH HOH . 
F 6 HOH A 45 49 49 HOH HOH . 
F 6 HOH A 46 50 50 HOH HOH . 
F 6 HOH A 47 51 51 HOH HOH . 
F 6 HOH A 48 52 52 HOH HOH . 
F 6 HOH A 49 53 53 HOH HOH . 
F 6 HOH A 50 54 54 HOH HOH . 
F 6 HOH A 51 55 55 HOH HOH . 
F 6 HOH A 52 56 56 HOH HOH . 
F 6 HOH A 53 57 57 HOH HOH . 
F 6 HOH A 54 58 58 HOH HOH . 
F 6 HOH A 55 59 59 HOH HOH . 
F 6 HOH A 56 60 60 HOH HOH . 
F 6 HOH A 57 61 61 HOH HOH . 
F 6 HOH A 58 355 1 HOH HOH . 
F 6 HOH A 59 356 2 HOH HOH . 
F 6 HOH A 60 357 8 HOH HOH . 
F 6 HOH A 61 358 9 HOH HOH . 
F 6 HOH A 62 359 62 HOH HOH . 
F 6 HOH A 63 360 63 HOH HOH . 
F 6 HOH A 64 361 64 HOH HOH . 
F 6 HOH A 65 362 65 HOH HOH . 
F 6 HOH A 66 363 66 HOH HOH . 
F 6 HOH A 67 364 67 HOH HOH . 
F 6 HOH A 68 365 68 HOH HOH . 
F 6 HOH A 69 366 69 HOH HOH . 
F 6 HOH A 70 367 70 HOH HOH . 
F 6 HOH A 71 368 71 HOH HOH . 
F 6 HOH A 72 369 72 HOH HOH . 
F 6 HOH A 73 370 73 HOH HOH . 
F 6 HOH A 74 371 74 HOH HOH . 
F 6 HOH A 75 372 75 HOH HOH . 
F 6 HOH A 76 373 76 HOH HOH . 
F 6 HOH A 77 374 77 HOH HOH . 
F 6 HOH A 78 375 78 HOH HOH . 
F 6 HOH A 79 376 79 HOH HOH . 
F 6 HOH A 80 377 80 HOH HOH . 
F 6 HOH A 81 378 81 HOH HOH . 
F 6 HOH A 82 379 82 HOH HOH . 
F 6 HOH A 83 380 83 HOH HOH . 
F 6 HOH A 84 381 84 HOH HOH . 
F 6 HOH A 85 382 85 HOH HOH . 
F 6 HOH A 86 383 86 HOH HOH . 
F 6 HOH A 87 384 87 HOH HOH . 
F 6 HOH A 88 385 88 HOH HOH . 
F 6 HOH A 89 386 89 HOH HOH . 
F 6 HOH A 90 387 90 HOH HOH . 
F 6 HOH A 91 388 91 HOH HOH . 
F 6 HOH A 92 389 92 HOH HOH . 
F 6 HOH A 93 390 93 HOH HOH . 
F 6 HOH A 94 391 94 HOH HOH . 
F 6 HOH A 95 392 95 HOH HOH . 
F 6 HOH A 96 393 96 HOH HOH . 
F 6 HOH A 97 394 97 HOH HOH . 
F 6 HOH A 98 395 98 HOH HOH . 
F 6 HOH A 99 396 99 HOH HOH . 
F 6 HOH A 100 397 100 HOH HOH . 
F 6 HOH A 101 398 101 HOH HOH . 
F 6 HOH A 102 399 102 HOH HOH . 
F 6 HOH A 103 400 103 HOH HOH . 
F 6 HOH A 104 401 104 HOH HOH . 
F 6 HOH A 105 402 105 HOH HOH . 
F 6 HOH A 106 403 106 HOH HOH . 
F 6 HOH A 107 404 107 HOH HOH . 
F 6 HOH A 108 405 108 HOH HOH . 
F 6 HOH A 109 406 109 HOH HOH . 
F 6 HOH A 110 407 110 HOH HOH . 
F 6 HOH A 111 408 111 HOH HOH . 
F 6 HOH A 112 409 112 HOH HOH . 
F 6 HOH A 113 410 113 HOH HOH . 
F 6 HOH A 114 411 114 HOH HOH . 
F 6 HOH A 115 412 115 HOH HOH . 
F 6 HOH A 116 413 116 HOH HOH . 
F 6 HOH A 117 414 117 HOH HOH . 
F 6 HOH A 118 415 118 HOH HOH . 
F 6 HOH A 119 416 119 HOH HOH . 
F 6 HOH A 120 417 120 HOH HOH . 
F 6 HOH A 121 418 121 HOH HOH . 
F 6 HOH A 122 419 122 HOH HOH . 
F 6 HOH A 123 420 123 HOH HOH . 
F 6 HOH A 124 421 124 HOH HOH . 
F 6 HOH A 125 422 125 HOH HOH . 
F 6 HOH A 126 423 126 HOH HOH . 
F 6 HOH A 127 424 127 HOH HOH . 
F 6 HOH A 128 425 128 HOH HOH . 
F 6 HOH A 129 426 129 HOH HOH . 
F 6 HOH A 130 427 130 HOH HOH . 
F 6 HOH A 131 428 131 HOH HOH . 
F 6 HOH A 132 429 132 HOH HOH . 
F 6 HOH A 133 430 133 HOH HOH . 
F 6 HOH A 134 431 134 HOH HOH . 
F 6 HOH A 135 432 135 HOH HOH . 
F 6 HOH A 136 433 136 HOH HOH . 
F 6 HOH A 137 434 137 HOH HOH . 
F 6 HOH A 138 435 138 HOH HOH . 
F 6 HOH A 139 436 139 HOH HOH . 
F 6 HOH A 140 437 140 HOH HOH . 
F 6 HOH A 141 438 141 HOH HOH . 
F 6 HOH A 142 439 142 HOH HOH . 
F 6 HOH A 143 440 143 HOH HOH . 
F 6 HOH A 144 441 144 HOH HOH . 
F 6 HOH A 145 442 145 HOH HOH . 
F 6 HOH A 146 443 146 HOH HOH . 
F 6 HOH A 147 444 147 HOH HOH . 
F 6 HOH A 148 445 148 HOH HOH . 
F 6 HOH A 149 446 149 HOH HOH . 
F 6 HOH A 150 447 150 HOH HOH . 
F 6 HOH A 151 448 151 HOH HOH . 
F 6 HOH A 152 449 152 HOH HOH . 
F 6 HOH A 153 450 153 HOH HOH . 
F 6 HOH A 154 451 154 HOH HOH . 
F 6 HOH A 155 452 155 HOH HOH . 
F 6 HOH A 156 453 156 HOH HOH . 
F 6 HOH A 157 454 157 HOH HOH . 
F 6 HOH A 158 455 158 HOH HOH . 
F 6 HOH A 159 456 159 HOH HOH . 
F 6 HOH A 160 457 160 HOH HOH . 
F 6 HOH A 161 458 161 HOH HOH . 
F 6 HOH A 162 459 162 HOH HOH . 
F 6 HOH A 163 460 163 HOH HOH . 
F 6 HOH A 164 461 164 HOH HOH . 
F 6 HOH A 165 462 165 HOH HOH . 
F 6 HOH A 166 463 166 HOH HOH . 
F 6 HOH A 167 464 167 HOH HOH . 
F 6 HOH A 168 465 168 HOH HOH . 
F 6 HOH A 169 466 169 HOH HOH . 
F 6 HOH A 170 467 170 HOH HOH . 
F 6 HOH A 171 468 171 HOH HOH . 
F 6 HOH A 172 469 172 HOH HOH . 
F 6 HOH A 173 470 173 HOH HOH . 
F 6 HOH A 174 471 174 HOH HOH . 
F 6 HOH A 175 472 175 HOH HOH . 
F 6 HOH A 176 473 176 HOH HOH . 
F 6 HOH A 177 474 177 HOH HOH . 
F 6 HOH A 178 475 178 HOH HOH . 
F 6 HOH A 179 476 179 HOH HOH . 
F 6 HOH A 180 477 180 HOH HOH . 
F 6 HOH A 181 478 181 HOH HOH . 
F 6 HOH A 182 479 182 HOH HOH . 
F 6 HOH A 183 480 183 HOH HOH . 
F 6 HOH A 184 481 184 HOH HOH . 
F 6 HOH A 185 482 185 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GAL . . . C 3 17.806 11.168 -6.824 1 43.79 ? C1 GAL 2 A 1 
HETATM 2 C C2 GAL . . . C 3 16.953 12.351 -6.406 1 43.25 ? C2 GAL 2 A 1 
HETATM 3 C C3 GAL . . . C 3 17.548 13.573 -7.072 1 40.12 ? C3 GAL 2 A 1 
HETATM 4 C C4 GAL . . . C 3 19.015 13.743 -6.63 1 37.07 ? C4 GAL 2 A 1 
HETATM 5 C C5 GAL . . . C 3 19.788 12.464 -6.96 1 36.43 ? C5 GAL 2 A 1 
HETATM 6 C C6 GAL . . . C 3 21.255 12.481 -6.487 1 37.31 ? C6 GAL 2 A 1 
HETATM 7 O O1 GAL . . . C 3 17.245 10.041 -6.203 1 45.66 ? O1 GAL 2 A 1 
HETATM 8 O O2 GAL . . . C 3 15.646 12.168 -6.864 1 47.41 ? O2 GAL 2 A 1 
HETATM 9 O O3 GAL . . . C 3 16.737 14.673 -6.793 1 40.43 ? O3 GAL 2 A 1 
HETATM 10 O O4 GAL . . . C 3 19.076 14.004 -5.254 1 31.4 ? O4 GAL 2 A 1 
HETATM 11 O O5 GAL . . . C 3 19.163 11.341 -6.422 1 36.78 ? O5 GAL 2 A 1 
HETATM 12 O O6 GAL . . . C 3 21.883 11.296 -6.937 1 32.1 ? O6 GAL 2 A 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           358 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           12 
#