data_3SXE # _model_server_result.job_id f4bdkLvTgQKKNMlSHZ1KrQ _model_server_result.datetime_utc '2024-11-07 12:46:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3SXE # _exptl.entry_id 3SXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SXE _cell.length_a 52.55 _cell.length_b 149.63 _cell.length_c 79.76 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.55 0 39.88 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O3B UDP . A UDP 1 1_555 E MN MN . A MN 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc2 B O1A UDP . A UDP 1 1_555 E MN MN . A MN 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc3 A OD1 ASP 150 A ASP 211 1_555 E MN MN . A MN 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc4 A OD1 ASP 152 A ASP 213 1_555 E MN MN . A MN 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 A OD2 ASP 152 A ASP 213 1_555 E MN MN . A MN 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc6 E MN MN . A MN 356 1_555 F O HOH . A HOH 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 382 n n N1 C6 UDP sing 383 n n N1 C1' UDP sing 384 n n C2 N3 UDP sing 385 n n C2 O2 UDP doub 386 n n N3 C4 UDP sing 387 n n N3 HN3 UDP sing 388 n n C4 C5 UDP sing 389 n n C4 O4 UDP doub 390 n n C5 C6 UDP doub 391 n n C5 H5 UDP sing 392 n n C6 H6 UDP sing 393 n n C1' C2' UDP sing 394 n n C1' O4' UDP sing 395 n n C1' H1' UDP sing 396 n n C2' O2' UDP sing 397 n n C2' C3' UDP sing 398 n n C2' H2' UDP sing 399 n n O2' HO2' UDP sing 400 n n C3' C4' UDP sing 401 n n C3' O3' UDP sing 402 n n C3' H3' UDP sing 403 n n C4' O4' UDP sing 404 n n C4' C5' UDP sing 405 n n C4' H4' UDP sing 406 n n O3' HO3' UDP sing 407 n n C5' O5' UDP sing 408 n n C5' "H5'1" UDP sing 409 n n C5' "H5'2" UDP sing 410 n n O5' PA UDP sing 411 n n PA O1A UDP doub 412 n n PA O2A UDP sing 413 n n PA O3A UDP sing 414 n n O2A HOA2 UDP sing 415 n n O3A PB UDP sing 416 n n PB O1B UDP doub 417 n n PB O2B UDP sing 418 n n PB O3B UDP sing 419 n n O2B HOB2 UDP sing 420 n n O3B HOB3 UDP sing 421 n n # _atom_sites.entry_id 3SXE _atom_sites.fract_transf_matrix[1][1] 0.019029 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 1 1 UDP UDP . C 3 GAL A 1 2 2 GAL GAL . D 3 GAL A 1 355 1 GAL GAL . E 4 MN A 1 356 2 MN MN . F 5 HOH A 1 3 3 HOH HOH . F 5 HOH A 2 4 4 HOH HOH . F 5 HOH A 3 5 5 HOH HOH . F 5 HOH A 4 6 6 HOH HOH . F 5 HOH A 5 7 7 HOH HOH . F 5 HOH A 6 8 8 HOH HOH . F 5 HOH A 7 9 9 HOH HOH . F 5 HOH A 8 10 10 HOH HOH . F 5 HOH A 9 11 11 HOH HOH . F 5 HOH A 10 12 12 HOH HOH . F 5 HOH A 11 13 13 HOH HOH . F 5 HOH A 12 14 14 HOH HOH . F 5 HOH A 13 15 15 HOH HOH . F 5 HOH A 14 16 16 HOH HOH . F 5 HOH A 15 17 17 HOH HOH . F 5 HOH A 16 18 18 HOH HOH . F 5 HOH A 17 19 19 HOH HOH . F 5 HOH A 18 20 20 HOH HOH . F 5 HOH A 19 21 21 HOH HOH . F 5 HOH A 20 22 22 HOH HOH . F 5 HOH A 21 23 23 HOH HOH . F 5 HOH A 22 24 24 HOH HOH . F 5 HOH A 23 25 25 HOH HOH . F 5 HOH A 24 26 26 HOH HOH . F 5 HOH A 25 27 27 HOH HOH . F 5 HOH A 26 28 28 HOH HOH . F 5 HOH A 27 29 29 HOH HOH . F 5 HOH A 28 30 30 HOH HOH . F 5 HOH A 29 31 31 HOH HOH . F 5 HOH A 30 32 32 HOH HOH . F 5 HOH A 31 33 33 HOH HOH . F 5 HOH A 32 34 34 HOH HOH . F 5 HOH A 33 35 35 HOH HOH . F 5 HOH A 34 36 36 HOH HOH . F 5 HOH A 35 37 37 HOH HOH . F 5 HOH A 36 38 38 HOH HOH . F 5 HOH A 37 39 39 HOH HOH . F 5 HOH A 38 40 40 HOH HOH . F 5 HOH A 39 41 41 HOH HOH . F 5 HOH A 40 42 42 HOH HOH . F 5 HOH A 41 43 43 HOH HOH . F 5 HOH A 42 44 44 HOH HOH . F 5 HOH A 43 45 45 HOH HOH . F 5 HOH A 44 46 46 HOH HOH . F 5 HOH A 45 47 47 HOH HOH . F 5 HOH A 46 48 48 HOH HOH . F 5 HOH A 47 49 49 HOH HOH . F 5 HOH A 48 50 50 HOH HOH . F 5 HOH A 49 51 51 HOH HOH . F 5 HOH A 50 52 52 HOH HOH . F 5 HOH A 51 53 53 HOH HOH . F 5 HOH A 52 54 54 HOH HOH . F 5 HOH A 53 55 55 HOH HOH . F 5 HOH A 54 56 56 HOH HOH . F 5 HOH A 55 57 57 HOH HOH . F 5 HOH A 56 58 58 HOH HOH . F 5 HOH A 57 59 59 HOH HOH . F 5 HOH A 58 60 60 HOH HOH . F 5 HOH A 59 61 61 HOH HOH . F 5 HOH A 60 357 1 HOH HOH . F 5 HOH A 61 358 2 HOH HOH . F 5 HOH A 62 359 62 HOH HOH . F 5 HOH A 63 360 63 HOH HOH . F 5 HOH A 64 361 64 HOH HOH . F 5 HOH A 65 362 65 HOH HOH . F 5 HOH A 66 363 66 HOH HOH . F 5 HOH A 67 364 67 HOH HOH . F 5 HOH A 68 365 68 HOH HOH . F 5 HOH A 69 366 69 HOH HOH . F 5 HOH A 70 367 70 HOH HOH . F 5 HOH A 71 368 71 HOH HOH . F 5 HOH A 72 369 72 HOH HOH . F 5 HOH A 73 370 73 HOH HOH . F 5 HOH A 74 371 74 HOH HOH . F 5 HOH A 75 372 75 HOH HOH . F 5 HOH A 76 373 76 HOH HOH . F 5 HOH A 77 374 77 HOH HOH . F 5 HOH A 78 375 78 HOH HOH . F 5 HOH A 79 376 79 HOH HOH . F 5 HOH A 80 377 80 HOH HOH . F 5 HOH A 81 378 81 HOH HOH . F 5 HOH A 82 379 82 HOH HOH . F 5 HOH A 83 380 83 HOH HOH . F 5 HOH A 84 381 84 HOH HOH . F 5 HOH A 85 382 85 HOH HOH . F 5 HOH A 86 383 86 HOH HOH . F 5 HOH A 87 384 87 HOH HOH . F 5 HOH A 88 385 88 HOH HOH . F 5 HOH A 89 386 89 HOH HOH . F 5 HOH A 90 387 90 HOH HOH . F 5 HOH A 91 388 91 HOH HOH . F 5 HOH A 92 389 92 HOH HOH . F 5 HOH A 93 390 93 HOH HOH . F 5 HOH A 94 391 94 HOH HOH . F 5 HOH A 95 392 95 HOH HOH . F 5 HOH A 96 393 96 HOH HOH . F 5 HOH A 97 394 97 HOH HOH . F 5 HOH A 98 395 98 HOH HOH . F 5 HOH A 99 396 99 HOH HOH . F 5 HOH A 100 397 100 HOH HOH . F 5 HOH A 101 398 101 HOH HOH . F 5 HOH A 102 399 102 HOH HOH . F 5 HOH A 103 400 103 HOH HOH . F 5 HOH A 104 401 104 HOH HOH . F 5 HOH A 105 402 105 HOH HOH . F 5 HOH A 106 403 106 HOH HOH . F 5 HOH A 107 404 107 HOH HOH . F 5 HOH A 108 405 108 HOH HOH . F 5 HOH A 109 406 109 HOH HOH . F 5 HOH A 110 407 110 HOH HOH . F 5 HOH A 111 408 111 HOH HOH . F 5 HOH A 112 409 112 HOH HOH . F 5 HOH A 113 410 113 HOH HOH . F 5 HOH A 114 411 114 HOH HOH . F 5 HOH A 115 412 115 HOH HOH . F 5 HOH A 116 413 116 HOH HOH . F 5 HOH A 117 414 117 HOH HOH . F 5 HOH A 118 415 118 HOH HOH . F 5 HOH A 119 416 119 HOH HOH . F 5 HOH A 120 417 120 HOH HOH . F 5 HOH A 121 418 121 HOH HOH . F 5 HOH A 122 419 122 HOH HOH . F 5 HOH A 123 420 123 HOH HOH . F 5 HOH A 124 421 124 HOH HOH . F 5 HOH A 125 422 125 HOH HOH . F 5 HOH A 126 423 126 HOH HOH . F 5 HOH A 127 424 127 HOH HOH . F 5 HOH A 128 425 128 HOH HOH . F 5 HOH A 129 426 129 HOH HOH . F 5 HOH A 130 427 130 HOH HOH . F 5 HOH A 131 428 131 HOH HOH . F 5 HOH A 132 429 132 HOH HOH . F 5 HOH A 133 430 133 HOH HOH . F 5 HOH A 134 431 134 HOH HOH . F 5 HOH A 135 432 135 HOH HOH . F 5 HOH A 136 433 136 HOH HOH . F 5 HOH A 137 434 137 HOH HOH . F 5 HOH A 138 435 138 HOH HOH . F 5 HOH A 139 436 139 HOH HOH . F 5 HOH A 140 437 140 HOH HOH . F 5 HOH A 141 438 141 HOH HOH . F 5 HOH A 142 439 142 HOH HOH . F 5 HOH A 143 440 143 HOH HOH . F 5 HOH A 144 441 144 HOH HOH . F 5 HOH A 145 442 145 HOH HOH . F 5 HOH A 146 443 146 HOH HOH . F 5 HOH A 147 444 147 HOH HOH . F 5 HOH A 148 445 148 HOH HOH . F 5 HOH A 149 446 149 HOH HOH . F 5 HOH A 150 447 150 HOH HOH . F 5 HOH A 151 448 151 HOH HOH . F 5 HOH A 152 449 152 HOH HOH . F 5 HOH A 153 450 153 HOH HOH . F 5 HOH A 154 451 154 HOH HOH . F 5 HOH A 155 452 155 HOH HOH . F 5 HOH A 156 453 156 HOH HOH . F 5 HOH A 157 454 157 HOH HOH . F 5 HOH A 158 455 158 HOH HOH . F 5 HOH A 159 456 159 HOH HOH . F 5 HOH A 160 457 160 HOH HOH . F 5 HOH A 161 458 161 HOH HOH . F 5 HOH A 162 459 162 HOH HOH . F 5 HOH A 163 460 163 HOH HOH . F 5 HOH A 164 461 164 HOH HOH . F 5 HOH A 165 462 165 HOH HOH . F 5 HOH A 166 463 166 HOH HOH . F 5 HOH A 167 464 167 HOH HOH . F 5 HOH A 168 465 168 HOH HOH . F 5 HOH A 169 466 169 HOH HOH . F 5 HOH A 170 467 170 HOH HOH . F 5 HOH A 171 468 171 HOH HOH . F 5 HOH A 172 469 172 HOH HOH . F 5 HOH A 173 470 173 HOH HOH . F 5 HOH A 174 471 174 HOH HOH . F 5 HOH A 175 472 175 HOH HOH . F 5 HOH A 176 473 176 HOH HOH . F 5 HOH A 177 474 177 HOH HOH . F 5 HOH A 178 475 178 HOH HOH . F 5 HOH A 179 476 179 HOH HOH . F 5 HOH A 180 477 180 HOH HOH . F 5 HOH A 181 478 181 HOH HOH . F 5 HOH A 182 479 182 HOH HOH . F 5 HOH A 183 480 183 HOH HOH . F 5 HOH A 184 481 184 HOH HOH . F 5 HOH A 185 482 185 HOH HOH . F 5 HOH A 186 483 186 HOH HOH . F 5 HOH A 187 484 187 HOH HOH . F 5 HOH A 188 485 188 HOH HOH . F 5 HOH A 189 486 189 HOH HOH . F 5 HOH A 190 487 190 HOH HOH . F 5 HOH A 191 488 191 HOH HOH . F 5 HOH A 192 489 192 HOH HOH . F 5 HOH A 193 490 193 HOH HOH . F 5 HOH A 194 491 194 HOH HOH . F 5 HOH A 195 492 195 HOH HOH . F 5 HOH A 196 493 196 HOH HOH . F 5 HOH A 197 494 197 HOH HOH . F 5 HOH A 198 495 198 HOH HOH . F 5 HOH A 199 496 199 HOH HOH . F 5 HOH A 200 497 200 HOH HOH . F 5 HOH A 201 498 201 HOH HOH . F 5 HOH A 202 499 202 HOH HOH . F 5 HOH A 203 500 203 HOH HOH . F 5 HOH A 204 501 204 HOH HOH . F 5 HOH A 205 502 205 HOH HOH . F 5 HOH A 206 503 206 HOH HOH . F 5 HOH A 207 504 207 HOH HOH . F 5 HOH A 208 505 208 HOH HOH . F 5 HOH A 209 506 209 HOH HOH . F 5 HOH A 210 507 210 HOH HOH . F 5 HOH A 211 508 211 HOH HOH . F 5 HOH A 212 509 212 HOH HOH . F 5 HOH A 213 510 213 HOH HOH . F 5 HOH A 214 511 214 HOH HOH . F 5 HOH A 215 512 215 HOH HOH . F 5 HOH A 216 513 216 HOH HOH . F 5 HOH A 217 514 217 HOH HOH . F 5 HOH A 218 515 218 HOH HOH . F 5 HOH A 219 516 219 HOH HOH . F 5 HOH A 220 517 220 HOH HOH . F 5 HOH A 221 518 221 HOH HOH . F 5 HOH A 222 519 222 HOH HOH . F 5 HOH A 223 520 223 HOH HOH . F 5 HOH A 224 521 224 HOH HOH . F 5 HOH A 225 522 225 HOH HOH . F 5 HOH A 226 523 226 HOH HOH . F 5 HOH A 227 524 227 HOH HOH . F 5 HOH A 228 525 228 HOH HOH . F 5 HOH A 229 526 229 HOH HOH . F 5 HOH A 230 527 230 HOH HOH . F 5 HOH A 231 528 231 HOH HOH . F 5 HOH A 232 529 232 HOH HOH . F 5 HOH A 233 530 233 HOH HOH . F 5 HOH A 234 531 234 HOH HOH . F 5 HOH A 235 532 235 HOH HOH . F 5 HOH A 236 533 236 HOH HOH . F 5 HOH A 237 534 237 HOH HOH . F 5 HOH A 238 535 238 HOH HOH . F 5 HOH A 239 536 239 HOH HOH . F 5 HOH A 240 537 240 HOH HOH . F 5 HOH A 241 538 241 HOH HOH . F 5 HOH A 242 539 242 HOH HOH . F 5 HOH A 243 540 243 HOH HOH . F 5 HOH A 244 541 244 HOH HOH . F 5 HOH A 245 542 245 HOH HOH . F 5 HOH A 246 543 246 HOH HOH . F 5 HOH A 247 544 247 HOH HOH . F 5 HOH A 248 545 248 HOH HOH . F 5 HOH A 249 546 249 HOH HOH . F 5 HOH A 250 547 250 HOH HOH . F 5 HOH A 251 548 251 HOH HOH . F 5 HOH A 252 549 252 HOH HOH . F 5 HOH A 253 550 253 HOH HOH . F 5 HOH A 254 551 254 HOH HOH . F 5 HOH A 255 552 255 HOH HOH . F 5 HOH A 256 553 256 HOH HOH . F 5 HOH A 257 554 257 HOH HOH . F 5 HOH A 258 555 258 HOH HOH . F 5 HOH A 259 556 259 HOH HOH . F 5 HOH A 260 557 260 HOH HOH . F 5 HOH A 261 558 261 HOH HOH . F 5 HOH A 262 559 262 HOH HOH . F 5 HOH A 263 560 263 HOH HOH . F 5 HOH A 264 561 264 HOH HOH . F 5 HOH A 265 562 265 HOH HOH . F 5 HOH A 266 563 266 HOH HOH . F 5 HOH A 267 564 267 HOH HOH . F 5 HOH A 268 565 268 HOH HOH . F 5 HOH A 269 566 269 HOH HOH . F 5 HOH A 270 567 270 HOH HOH . F 5 HOH A 271 568 271 HOH HOH . F 5 HOH A 272 569 272 HOH HOH . F 5 HOH A 273 570 273 HOH HOH . F 5 HOH A 274 571 274 HOH HOH . F 5 HOH A 275 572 275 HOH HOH . F 5 HOH A 276 573 276 HOH HOH . F 5 HOH A 277 574 277 HOH HOH . F 5 HOH A 278 575 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . B 2 9.996 23.373 -7.564 1 17.53 ? N1 UDP 1 A 1 HETATM 2 C C2 UDP . . . B 2 8.836 24.102 -7.856 1 17.55 ? C2 UDP 1 A 1 HETATM 3 N N3 UDP . . . B 2 8.277 24.05 -9.142 1 18.65 ? N3 UDP 1 A 1 HETATM 4 C C4 UDP . . . B 2 8.875 23.321 -10.177 1 22.59 ? C4 UDP 1 A 1 HETATM 5 C C5 UDP . . . B 2 10.06 22.648 -9.93 1 21.39 ? C5 UDP 1 A 1 HETATM 6 C C6 UDP . . . B 2 10.627 22.666 -8.624 1 19.21 ? C6 UDP 1 A 1 HETATM 7 O O2 UDP . . . B 2 8.24 24.668 -6.984 1 16.82 ? O2 UDP 1 A 1 HETATM 8 O O4 UDP . . . B 2 8.324 23.346 -11.327 1 22.4 ? O4 UDP 1 A 1 HETATM 9 C C1' UDP . . . B 2 10.48 23.506 -6.16 1 17.42 ? C1' UDP 1 A 1 HETATM 10 C C2' UDP . . . B 2 9.643 22.652 -5.197 1 17.66 ? C2' UDP 1 A 1 HETATM 11 O O2' UDP . . . B 2 9.792 23.327 -3.933 1 17.06 ? O2' UDP 1 A 1 HETATM 12 C C3' UDP . . . B 2 10.376 21.363 -5.248 1 15.19 ? C3' UDP 1 A 1 HETATM 13 C C4' UDP . . . B 2 11.845 21.855 -5.196 1 15.5 ? C4' UDP 1 A 1 HETATM 14 O O4' UDP . . . B 2 11.821 22.937 -6.14 1 17.8 ? O4' UDP 1 A 1 HETATM 15 O O3' UDP . . . B 2 10.09 20.677 -4.039 1 15.5 ? O3' UDP 1 A 1 HETATM 16 C C5' UDP . . . B 2 12.857 20.765 -5.746 1 16.83 ? C5' UDP 1 A 1 HETATM 17 O O5' UDP . . . B 2 12.362 20.165 -6.987 1 17.75 ? O5' UDP 1 A 1 HETATM 18 P PA UDP . . . B 2 11.819 18.708 -7.03 1 19.29 ? PA UDP 1 A 1 HETATM 19 O O1A UDP . . . B 2 10.976 18.454 -5.791 1 18.86 ? O1A UDP 1 A 1 HETATM 20 O O2A UDP . . . B 2 11.131 18.545 -8.38 1 20.46 ? O2A UDP 1 A 1 HETATM 21 O O3A UDP . . . B 2 13.186 17.809 -6.979 1 19.1 ? O3A UDP 1 A 1 HETATM 22 P PB UDP . . . B 2 13.149 16.234 -6.645 1 21.28 ? PB UDP 1 A 1 HETATM 23 O O1B UDP . . . B 2 11.967 15.578 -7.454 1 23.99 ? O1B UDP 1 A 1 HETATM 24 O O2B UDP . . . B 2 14.485 15.69 -7.098 1 21.96 ? O2B UDP 1 A 1 HETATM 25 O O3B UDP . . . B 2 12.827 16.094 -5.108 1 20.11 ? O3B UDP 1 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #