data_3SXI # _model_server_result.job_id T4QhO2Cl1bV-ga6ouNqEPg _model_server_result.datetime_utc '2024-11-26 22:03:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 3SXI # _exptl.entry_id 3SXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 34.081 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HYDROSULFURIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SXI _cell.length_a 150.09 _cell.length_b 150.09 _cell.length_c 81.46 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 359 A CYS 356 1_555 H S H2S . A H2S 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? covale ? covale2 A SG CYS 163 A CYS 160 1_555 I S H2S . A H2S 508 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.195 ? covale ? covale3 A SG CYS 163 A CYS 160 1_555 I S H2S . A H2S 508 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.197 ? # _chem_comp.formula 'H2 S' _chem_comp.formula_weight 34.081 _chem_comp.id H2S _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROSULFURIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROGEN SULFIDE' # _atom_sites.entry_id 3SXI _atom_sites.fract_transf_matrix[1][1] 0.006663 _atom_sites.fract_transf_matrix[1][2] 0.003847 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 500 500 FAD FAD . C 3 LMT A 1 501 501 LMT LMT . D 4 DCQ A 1 502 502 DCQ DCQ . E 5 SO4 A 1 503 503 SO4 SO4 . F 6 H2S A 1 505 505 H2S H2S . G 6 H2S A 1 506 506 H2S H2S . H 6 H2S A 1 507 507 H2S H2S . I 6 H2S A 1 508 508 H2S H2S . J 7 HOH A 1 509 509 HOH HOH . J 7 HOH A 2 510 510 HOH HOH . J 7 HOH A 3 511 511 HOH HOH . J 7 HOH A 4 512 512 HOH HOH . J 7 HOH A 5 513 513 HOH HOH . J 7 HOH A 6 514 514 HOH HOH . J 7 HOH A 7 515 515 HOH HOH . J 7 HOH A 8 516 516 HOH HOH . J 7 HOH A 9 517 517 HOH HOH . J 7 HOH A 10 518 518 HOH HOH . J 7 HOH A 11 519 519 HOH HOH . J 7 HOH A 12 520 520 HOH HOH . J 7 HOH A 13 521 521 HOH HOH . J 7 HOH A 14 522 522 HOH HOH . J 7 HOH A 15 523 523 HOH HOH . J 7 HOH A 16 524 524 HOH HOH . J 7 HOH A 17 525 525 HOH HOH . J 7 HOH A 18 526 526 HOH HOH . J 7 HOH A 19 527 527 HOH HOH . J 7 HOH A 20 528 528 HOH HOH . J 7 HOH A 21 529 529 HOH HOH . J 7 HOH A 22 530 530 HOH HOH . J 7 HOH A 23 531 531 HOH HOH . J 7 HOH A 24 532 532 HOH HOH . J 7 HOH A 25 533 533 HOH HOH . J 7 HOH A 26 534 534 HOH HOH . J 7 HOH A 27 535 535 HOH HOH . J 7 HOH A 28 536 536 HOH HOH . J 7 HOH A 29 537 537 HOH HOH . J 7 HOH A 30 538 538 HOH HOH . J 7 HOH A 31 539 539 HOH HOH . J 7 HOH A 32 540 540 HOH HOH . J 7 HOH A 33 541 541 HOH HOH . J 7 HOH A 34 542 542 HOH HOH . J 7 HOH A 35 543 543 HOH HOH . J 7 HOH A 36 544 544 HOH HOH . J 7 HOH A 37 545 545 HOH HOH . J 7 HOH A 38 546 546 HOH HOH . J 7 HOH A 39 547 547 HOH HOH . J 7 HOH A 40 548 548 HOH HOH . J 7 HOH A 41 549 549 HOH HOH . J 7 HOH A 42 550 550 HOH HOH . J 7 HOH A 43 551 551 HOH HOH . J 7 HOH A 44 552 552 HOH HOH . J 7 HOH A 45 553 553 HOH HOH . J 7 HOH A 46 554 554 HOH HOH . J 7 HOH A 47 555 555 HOH HOH . J 7 HOH A 48 556 556 HOH HOH . J 7 HOH A 49 557 557 HOH HOH . J 7 HOH A 50 558 558 HOH HOH . J 7 HOH A 51 559 559 HOH HOH . J 7 HOH A 52 560 560 HOH HOH . J 7 HOH A 53 561 561 HOH HOH . J 7 HOH A 54 562 562 HOH HOH . J 7 HOH A 55 563 563 HOH HOH . J 7 HOH A 56 564 564 HOH HOH . J 7 HOH A 57 565 565 HOH HOH . J 7 HOH A 58 566 566 HOH HOH . J 7 HOH A 59 567 567 HOH HOH . J 7 HOH A 60 568 568 HOH HOH . J 7 HOH A 61 569 569 HOH HOH . J 7 HOH A 62 570 570 HOH HOH . J 7 HOH A 63 571 571 HOH HOH . J 7 HOH A 64 572 572 HOH HOH . J 7 HOH A 65 573 573 HOH HOH . J 7 HOH A 66 574 574 HOH HOH . J 7 HOH A 67 575 575 HOH HOH . J 7 HOH A 68 576 576 HOH HOH . J 7 HOH A 69 577 577 HOH HOH . J 7 HOH A 70 578 578 HOH HOH . J 7 HOH A 71 579 579 HOH HOH . J 7 HOH A 72 580 580 HOH HOH . J 7 HOH A 73 581 581 HOH HOH . J 7 HOH A 74 582 582 HOH HOH . J 7 HOH A 75 583 583 HOH HOH . J 7 HOH A 76 584 584 HOH HOH . J 7 HOH A 77 585 585 HOH HOH . J 7 HOH A 78 586 586 HOH HOH . J 7 HOH A 79 587 587 HOH HOH . J 7 HOH A 80 588 588 HOH HOH . J 7 HOH A 81 589 589 HOH HOH . J 7 HOH A 82 590 590 HOH HOH . J 7 HOH A 83 591 591 HOH HOH . J 7 HOH A 84 592 592 HOH HOH . J 7 HOH A 85 593 593 HOH HOH . J 7 HOH A 86 594 594 HOH HOH . J 7 HOH A 87 595 595 HOH HOH . J 7 HOH A 88 596 596 HOH HOH . J 7 HOH A 89 597 597 HOH HOH . J 7 HOH A 90 598 598 HOH HOH . J 7 HOH A 91 599 599 HOH HOH . J 7 HOH A 92 600 600 HOH HOH . J 7 HOH A 93 601 601 HOH HOH . J 7 HOH A 94 602 602 HOH HOH . J 7 HOH A 95 603 603 HOH HOH . J 7 HOH A 96 604 604 HOH HOH . J 7 HOH A 97 605 605 HOH HOH . J 7 HOH A 98 606 606 HOH HOH . J 7 HOH A 99 607 607 HOH HOH . J 7 HOH A 100 608 608 HOH HOH . J 7 HOH A 101 609 609 HOH HOH . J 7 HOH A 102 610 610 HOH HOH . J 7 HOH A 103 611 611 HOH HOH . J 7 HOH A 104 612 612 HOH HOH . J 7 HOH A 105 613 613 HOH HOH . J 7 HOH A 106 614 614 HOH HOH . J 7 HOH A 107 615 615 HOH HOH . J 7 HOH A 108 616 616 HOH HOH . J 7 HOH A 109 617 617 HOH HOH . J 7 HOH A 110 618 618 HOH HOH . J 7 HOH A 111 619 619 HOH HOH . J 7 HOH A 112 620 620 HOH HOH . J 7 HOH A 113 621 621 HOH HOH . J 7 HOH A 114 622 622 HOH HOH . J 7 HOH A 115 623 623 HOH HOH . J 7 HOH A 116 624 624 HOH HOH . J 7 HOH A 117 625 625 HOH HOH . J 7 HOH A 118 626 626 HOH HOH . J 7 HOH A 119 627 627 HOH HOH . J 7 HOH A 120 628 628 HOH HOH . J 7 HOH A 121 629 629 HOH HOH . J 7 HOH A 122 630 630 HOH HOH . J 7 HOH A 123 631 631 HOH HOH . J 7 HOH A 124 632 632 HOH HOH . J 7 HOH A 125 633 633 HOH HOH . J 7 HOH A 126 634 634 HOH HOH . J 7 HOH A 127 635 635 HOH HOH . J 7 HOH A 128 636 636 HOH HOH . J 7 HOH A 129 637 637 HOH HOH . J 7 HOH A 130 638 638 HOH HOH . J 7 HOH A 131 639 639 HOH HOH . J 7 HOH A 132 640 640 HOH HOH . J 7 HOH A 133 641 641 HOH HOH . J 7 HOH A 134 642 642 HOH HOH . J 7 HOH A 135 643 643 HOH HOH . J 7 HOH A 136 644 644 HOH HOH . J 7 HOH A 137 645 645 HOH HOH . J 7 HOH A 138 646 646 HOH HOH . J 7 HOH A 139 647 647 HOH HOH . J 7 HOH A 140 648 648 HOH HOH . J 7 HOH A 141 649 649 HOH HOH . J 7 HOH A 142 650 650 HOH HOH . J 7 HOH A 143 651 651 HOH HOH . J 7 HOH A 144 652 652 HOH HOH . J 7 HOH A 145 653 653 HOH HOH . J 7 HOH A 146 654 654 HOH HOH . J 7 HOH A 147 655 655 HOH HOH . J 7 HOH A 148 656 656 HOH HOH . J 7 HOH A 149 657 657 HOH HOH . J 7 HOH A 150 658 658 HOH HOH . J 7 HOH A 151 659 659 HOH HOH . J 7 HOH A 152 660 660 HOH HOH . J 7 HOH A 153 661 661 HOH HOH . J 7 HOH A 154 662 662 HOH HOH . J 7 HOH A 155 663 663 HOH HOH . J 7 HOH A 156 664 664 HOH HOH . J 7 HOH A 157 665 665 HOH HOH . J 7 HOH A 158 666 666 HOH HOH . J 7 HOH A 159 667 667 HOH HOH . J 7 HOH A 160 668 668 HOH HOH . J 7 HOH A 161 669 669 HOH HOH . J 7 HOH A 162 670 670 HOH HOH . J 7 HOH A 163 671 671 HOH HOH . J 7 HOH A 164 672 672 HOH HOH . J 7 HOH A 165 673 673 HOH HOH . J 7 HOH A 166 674 674 HOH HOH . J 7 HOH A 167 675 675 HOH HOH . J 7 HOH A 168 676 676 HOH HOH . J 7 HOH A 169 677 677 HOH HOH . J 7 HOH A 170 678 678 HOH HOH . J 7 HOH A 171 679 679 HOH HOH . J 7 HOH A 172 680 680 HOH HOH . J 7 HOH A 173 681 681 HOH HOH . J 7 HOH A 174 682 682 HOH HOH . J 7 HOH A 175 683 683 HOH HOH . J 7 HOH A 176 684 684 HOH HOH . J 7 HOH A 177 685 685 HOH HOH . J 7 HOH A 178 686 686 HOH HOH . J 7 HOH A 179 687 687 HOH HOH . J 7 HOH A 180 688 688 HOH HOH . J 7 HOH A 181 689 689 HOH HOH . J 7 HOH A 182 690 690 HOH HOH . J 7 HOH A 183 691 691 HOH HOH . J 7 HOH A 184 692 692 HOH HOH . J 7 HOH A 185 693 693 HOH HOH . J 7 HOH A 186 694 694 HOH HOH . J 7 HOH A 187 695 695 HOH HOH . J 7 HOH A 188 696 696 HOH HOH . J 7 HOH A 189 697 697 HOH HOH . J 7 HOH A 190 698 698 HOH HOH . J 7 HOH A 191 699 699 HOH HOH . J 7 HOH A 192 700 700 HOH HOH . J 7 HOH A 193 701 701 HOH HOH . J 7 HOH A 194 702 702 HOH HOH . J 7 HOH A 195 703 703 HOH HOH . J 7 HOH A 196 704 704 HOH HOH . J 7 HOH A 197 705 705 HOH HOH . J 7 HOH A 198 706 706 HOH HOH . J 7 HOH A 199 707 707 HOH HOH . J 7 HOH A 200 708 708 HOH HOH . J 7 HOH A 201 709 709 HOH HOH . J 7 HOH A 202 710 710 HOH HOH . J 7 HOH A 203 711 711 HOH HOH . J 7 HOH A 204 712 712 HOH HOH . J 7 HOH A 205 713 713 HOH HOH . J 7 HOH A 206 714 714 HOH HOH . J 7 HOH A 207 715 715 HOH HOH . J 7 HOH A 208 716 716 HOH HOH . J 7 HOH A 209 717 717 HOH HOH . J 7 HOH A 210 718 718 HOH HOH . J 7 HOH A 211 719 719 HOH HOH . J 7 HOH A 212 720 720 HOH HOH . J 7 HOH A 213 721 721 HOH HOH . J 7 HOH A 214 722 722 HOH HOH . J 7 HOH A 215 723 723 HOH HOH . J 7 HOH A 216 724 724 HOH HOH . J 7 HOH A 217 725 725 HOH HOH . J 7 HOH A 218 726 726 HOH HOH . J 7 HOH A 219 727 727 HOH HOH . J 7 HOH A 220 728 728 HOH HOH . J 7 HOH A 221 729 729 HOH HOH . J 7 HOH A 222 730 730 HOH HOH . J 7 HOH A 223 731 731 HOH HOH . J 7 HOH A 224 732 732 HOH HOH . J 7 HOH A 225 733 733 HOH HOH . J 7 HOH A 226 734 734 HOH HOH . J 7 HOH A 227 735 735 HOH HOH . J 7 HOH A 228 736 736 HOH HOH . J 7 HOH A 229 737 737 HOH HOH . J 7 HOH A 230 738 738 HOH HOH . J 7 HOH A 231 739 739 HOH HOH . J 7 HOH A 232 740 740 HOH HOH . J 7 HOH A 233 741 741 HOH HOH . J 7 HOH A 234 742 742 HOH HOH . J 7 HOH A 235 743 743 HOH HOH . J 7 HOH A 236 744 744 HOH HOH . J 7 HOH A 237 745 745 HOH HOH . J 7 HOH A 238 746 746 HOH HOH . J 7 HOH A 239 747 747 HOH HOH . J 7 HOH A 240 748 748 HOH HOH . J 7 HOH A 241 749 749 HOH HOH . J 7 HOH A 242 750 750 HOH HOH . J 7 HOH A 243 751 751 HOH HOH . J 7 HOH A 244 752 752 HOH HOH . J 7 HOH A 245 753 753 HOH HOH . J 7 HOH A 246 754 754 HOH HOH . J 7 HOH A 247 755 755 HOH HOH . J 7 HOH A 248 756 756 HOH HOH . J 7 HOH A 249 757 757 HOH HOH . J 7 HOH A 250 758 758 HOH HOH . J 7 HOH A 251 759 759 HOH HOH . J 7 HOH A 252 760 760 HOH HOH . J 7 HOH A 253 761 761 HOH HOH . J 7 HOH A 254 762 762 HOH HOH . J 7 HOH A 255 763 763 HOH HOH . J 7 HOH A 256 764 764 HOH HOH . J 7 HOH A 257 765 765 HOH HOH . J 7 HOH A 258 766 766 HOH HOH . J 7 HOH A 259 767 767 HOH HOH . J 7 HOH A 260 768 768 HOH HOH . J 7 HOH A 261 769 769 HOH HOH . J 7 HOH A 262 770 770 HOH HOH . J 7 HOH A 263 771 771 HOH HOH . J 7 HOH A 264 772 772 HOH HOH . J 7 HOH A 265 773 773 HOH HOH . J 7 HOH A 266 774 774 HOH HOH . J 7 HOH A 267 775 775 HOH HOH . J 7 HOH A 268 776 776 HOH HOH . J 7 HOH A 269 777 777 HOH HOH . J 7 HOH A 270 778 778 HOH HOH . J 7 HOH A 271 779 779 HOH HOH . J 7 HOH A 272 780 780 HOH HOH . J 7 HOH A 273 781 781 HOH HOH . J 7 HOH A 274 782 782 HOH HOH . J 7 HOH A 275 783 783 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol S _atom_site.label_atom_id S _atom_site.label_comp_id H2S _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 6 _atom_site.Cartn_x 49.398 _atom_site.Cartn_y -14.895 _atom_site.Cartn_z 4.5 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 96.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id S _atom_site.auth_comp_id H2S _atom_site.auth_seq_id 507 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #