data_3SY9
#
_model_server_result.job_id            1i_w-HYxANnMVEA7LPscpQ 
_model_server_result.datetime_utc      '2024-11-27 10:53:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sy9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":501}' 
#
_entry.id    3SY9 
#
_exptl.entry_id    3SY9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.438 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_entity.pdbx_number_of_molecules    18 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.67 
_cell.angle_beta          62.57 
_cell.angle_gamma         62.95 
_cell.entry_id            3SY9 
_cell.length_a            93.353 
_cell.length_b            102.828 
_cell.length_c            101.696 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SY9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,J,Y 1 1 
B,K,L,M,N,O,P,Q,Z 2 1 
C,R,S,T,U,V,AA 3 1 
D,W,X,BA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
#
_chem_comp.formula           'C16 H34 O5' 
_chem_comp.formula_weight    306.438 
_chem_comp.id                C8E 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 C8E sing 118 n n 
C1 H11 C8E sing 119 n n 
C1 H12 C8E sing 120 n n 
C1 H13 C8E sing 121 n n 
C2 C3 C8E sing 122 n n 
C2 H21 C8E sing 123 n n 
C2 H22 C8E sing 124 n n 
C3 C4 C8E sing 125 n n 
C3 H31 C8E sing 126 n n 
C3 H32 C8E sing 127 n n 
C4 C5 C8E sing 128 n n 
C4 H41 C8E sing 129 n n 
C4 H42 C8E sing 130 n n 
C5 C6 C8E sing 131 n n 
C5 H51 C8E sing 132 n n 
C5 H52 C8E sing 133 n n 
C6 C7 C8E sing 134 n n 
C6 H61 C8E sing 135 n n 
C6 H62 C8E sing 136 n n 
C7 C8 C8E sing 137 n n 
C7 H71 C8E sing 138 n n 
C7 H72 C8E sing 139 n n 
C8 O9 C8E sing 140 n n 
C8 H81 C8E sing 141 n n 
C8 H82 C8E sing 142 n n 
O9 C10 C8E sing 143 n n 
C10 C11 C8E sing 144 n n 
C10 H101 C8E sing 145 n n 
C10 H102 C8E sing 146 n n 
C11 O12 C8E sing 147 n n 
C11 H111 C8E sing 148 n n 
C11 H112 C8E sing 149 n n 
O12 C13 C8E sing 150 n n 
C13 C14 C8E sing 151 n n 
C13 H131 C8E sing 152 n n 
C13 H132 C8E sing 153 n n 
C14 O15 C8E sing 154 n n 
C14 H141 C8E sing 155 n n 
C14 H142 C8E sing 156 n n 
O15 C16 C8E sing 157 n n 
C16 C17 C8E sing 158 n n 
C16 H161 C8E sing 159 n n 
C16 H162 C8E sing 160 n n 
C17 O18 C8E sing 161 n n 
C17 H171 C8E sing 162 n n 
C17 H172 C8E sing 163 n n 
O18 C19 C8E sing 164 n n 
C19 C20 C8E sing 165 n n 
C19 H191 C8E sing 166 n n 
C19 H192 C8E sing 167 n n 
C20 O21 C8E sing 168 n n 
C20 H201 C8E sing 169 n n 
C20 H202 C8E sing 170 n n 
O21 HO2 C8E sing 171 n n 
#
_atom_sites.entry_id                     3SY9 
_atom_sites.fract_transf_matrix[1][1]    0.010712 
_atom_sites.fract_transf_matrix[1][2]    -0.00547 
_atom_sites.fract_transf_matrix[1][3]    -0.005532 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010919 
_atom_sites.fract_transf_matrix[2][3]    -0.000056 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011079 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 C8E A 1 501 1 C8E C8E . 
F 2 C8E A 1 502 2 C8E C8E . 
G 2 C8E A 1 503 3 C8E C8E . 
H 2 C8E A 1 504 5 C8E C8E . 
I 2 C8E A 1 505 7 C8E C8E . 
J 3 BOG A 1 506 2 BOG BOG . 
K 2 C8E B 1 501 9 C8E C8E . 
L 2 C8E B 1 502 10 C8E C8E . 
M 2 C8E B 1 503 12 C8E C8E . 
N 2 C8E B 1 504 13 C8E C8E . 
O 2 C8E B 1 505 14 C8E C8E . 
P 2 C8E B 1 506 15 C8E C8E . 
Q 3 BOG B 1 507 1 BOG BOG . 
R 2 C8E C 1 501 4 C8E C8E . 
S 2 C8E C 1 502 6 C8E C8E . 
T 2 C8E C 1 503 17 C8E C8E . 
U 2 C8E C 1 504 18 C8E C8E . 
V 2 C8E C 1 505 19 C8E C8E . 
W 2 C8E D 1 501 20 C8E C8E . 
X 2 C8E D 1 502 22 C8E C8E . 
Y 4 HOH A 1 601 73 HOH HOH . 
Y 4 HOH A 2 602 74 HOH HOH . 
Y 4 HOH A 3 603 77 HOH HOH . 
Y 4 HOH A 4 604 79 HOH HOH . 
Y 4 HOH A 5 605 88 HOH HOH . 
Y 4 HOH A 6 606 90 HOH HOH . 
Y 4 HOH A 7 607 91 HOH HOH . 
Y 4 HOH A 8 608 95 HOH HOH . 
Y 4 HOH A 9 609 97 HOH HOH . 
Y 4 HOH A 10 610 3 HOH HOH . 
Y 4 HOH A 11 611 4 HOH HOH . 
Y 4 HOH A 12 612 11 HOH HOH . 
Y 4 HOH A 13 613 12 HOH HOH . 
Y 4 HOH A 14 614 13 HOH HOH . 
Y 4 HOH A 15 615 15 HOH HOH . 
Y 4 HOH A 16 616 21 HOH HOH . 
Y 4 HOH A 17 617 26 HOH HOH . 
Y 4 HOH A 18 618 29 HOH HOH . 
Y 4 HOH A 19 619 34 HOH HOH . 
Y 4 HOH A 20 620 36 HOH HOH . 
Y 4 HOH A 21 621 39 HOH HOH . 
Y 4 HOH A 22 622 42 HOH HOH . 
Y 4 HOH A 23 623 43 HOH HOH . 
Y 4 HOH A 24 624 45 HOH HOH . 
Y 4 HOH A 25 625 50 HOH HOH . 
Y 4 HOH A 26 626 51 HOH HOH . 
Y 4 HOH A 27 627 52 HOH HOH . 
Y 4 HOH A 28 628 55 HOH HOH . 
Y 4 HOH A 29 629 56 HOH HOH . 
Y 4 HOH A 30 630 58 HOH HOH . 
Y 4 HOH A 31 631 59 HOH HOH . 
Y 4 HOH A 32 632 64 HOH HOH . 
Y 4 HOH A 33 633 66 HOH HOH . 
Y 4 HOH A 34 634 69 HOH HOH . 
Y 4 HOH A 35 635 83 HOH HOH . 
Y 4 HOH A 36 636 86 HOH HOH . 
Y 4 HOH A 37 637 99 HOH HOH . 
Y 4 HOH A 38 638 100 HOH HOH . 
Y 4 HOH A 39 639 109 HOH HOH . 
Y 4 HOH A 40 640 110 HOH HOH . 
Y 4 HOH A 41 641 113 HOH HOH . 
Y 4 HOH A 42 642 115 HOH HOH . 
Z 4 HOH B 1 601 71 HOH HOH . 
Z 4 HOH B 2 602 78 HOH HOH . 
Z 4 HOH B 3 603 93 HOH HOH . 
Z 4 HOH B 4 604 94 HOH HOH . 
Z 4 HOH B 5 605 6 HOH HOH . 
Z 4 HOH B 6 606 7 HOH HOH . 
Z 4 HOH B 7 607 9 HOH HOH . 
Z 4 HOH B 8 608 16 HOH HOH . 
Z 4 HOH B 9 609 17 HOH HOH . 
Z 4 HOH B 10 610 19 HOH HOH . 
Z 4 HOH B 11 611 22 HOH HOH . 
Z 4 HOH B 12 612 23 HOH HOH . 
Z 4 HOH B 13 613 28 HOH HOH . 
Z 4 HOH B 14 614 40 HOH HOH . 
Z 4 HOH B 15 615 48 HOH HOH . 
Z 4 HOH B 16 616 49 HOH HOH . 
Z 4 HOH B 17 617 54 HOH HOH . 
Z 4 HOH B 18 618 61 HOH HOH . 
Z 4 HOH B 19 619 62 HOH HOH . 
Z 4 HOH B 20 620 65 HOH HOH . 
Z 4 HOH B 21 621 70 HOH HOH . 
Z 4 HOH B 22 622 80 HOH HOH . 
Z 4 HOH B 23 623 98 HOH HOH . 
Z 4 HOH B 24 624 101 HOH HOH . 
Z 4 HOH B 25 625 103 HOH HOH . 
Z 4 HOH B 26 626 106 HOH HOH . 
Z 4 HOH B 27 627 111 HOH HOH . 
Z 4 HOH B 28 628 112 HOH HOH . 
Z 4 HOH B 29 629 118 HOH HOH . 
Z 4 HOH B 30 630 123 HOH HOH . 
Z 4 HOH B 31 631 124 HOH HOH . 
Z 4 HOH B 32 632 125 HOH HOH . 
AA 4 HOH C 1 601 2 HOH HOH . 
AA 4 HOH C 2 602 5 HOH HOH . 
AA 4 HOH C 3 603 10 HOH HOH . 
AA 4 HOH C 4 604 14 HOH HOH . 
AA 4 HOH C 5 605 24 HOH HOH . 
AA 4 HOH C 6 606 25 HOH HOH . 
AA 4 HOH C 7 607 32 HOH HOH . 
AA 4 HOH C 8 608 33 HOH HOH . 
AA 4 HOH C 9 609 37 HOH HOH . 
AA 4 HOH C 10 610 38 HOH HOH . 
AA 4 HOH C 11 611 44 HOH HOH . 
AA 4 HOH C 12 612 53 HOH HOH . 
AA 4 HOH C 13 613 57 HOH HOH . 
AA 4 HOH C 14 614 60 HOH HOH . 
AA 4 HOH C 15 615 63 HOH HOH . 
AA 4 HOH C 16 616 67 HOH HOH . 
AA 4 HOH C 17 617 68 HOH HOH . 
AA 4 HOH C 18 618 72 HOH HOH . 
AA 4 HOH C 19 619 81 HOH HOH . 
AA 4 HOH C 20 620 82 HOH HOH . 
AA 4 HOH C 21 621 89 HOH HOH . 
AA 4 HOH C 22 622 96 HOH HOH . 
AA 4 HOH C 23 623 104 HOH HOH . 
AA 4 HOH C 24 624 105 HOH HOH . 
AA 4 HOH C 25 625 108 HOH HOH . 
AA 4 HOH C 26 626 114 HOH HOH . 
AA 4 HOH C 27 627 119 HOH HOH . 
AA 4 HOH C 28 628 121 HOH HOH . 
AA 4 HOH C 29 629 126 HOH HOH . 
AA 4 HOH C 30 630 127 HOH HOH . 
AA 4 HOH C 31 631 128 HOH HOH . 
AA 4 HOH C 32 632 129 HOH HOH . 
BA 4 HOH D 1 601 1 HOH HOH . 
BA 4 HOH D 2 602 8 HOH HOH . 
BA 4 HOH D 3 603 18 HOH HOH . 
BA 4 HOH D 4 604 20 HOH HOH . 
BA 4 HOH D 5 605 27 HOH HOH . 
BA 4 HOH D 6 606 31 HOH HOH . 
BA 4 HOH D 7 607 35 HOH HOH . 
BA 4 HOH D 8 608 41 HOH HOH . 
BA 4 HOH D 9 609 46 HOH HOH . 
BA 4 HOH D 10 610 47 HOH HOH . 
BA 4 HOH D 11 611 75 HOH HOH . 
BA 4 HOH D 12 612 84 HOH HOH . 
BA 4 HOH D 13 613 85 HOH HOH . 
BA 4 HOH D 14 614 87 HOH HOH . 
BA 4 HOH D 15 615 92 HOH HOH . 
BA 4 HOH D 16 616 102 HOH HOH . 
BA 4 HOH D 17 617 117 HOH HOH . 
BA 4 HOH D 18 618 120 HOH HOH . 
BA 4 HOH D 19 619 122 HOH HOH . 
BA 4 HOH D 20 620 130 HOH HOH . 
BA 4 HOH D 21 621 131 HOH HOH . 
BA 4 HOH D 22 622 132 HOH HOH . 
BA 4 HOH D 23 623 133 HOH HOH . 
BA 4 HOH D 24 624 134 HOH HOH . 
BA 4 HOH D 25 625 135 HOH HOH . 
BA 4 HOH D 26 626 136 HOH HOH . 
BA 4 HOH D 27 627 137 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 C8E . . . R 2 -6.023 -3.096 11.96 1 67.69 ? C13 C8E 501 C 1 
HETATM 2 C C14 C8E . . . R 2 -4.732 -3.909 12.014 1 69.32 ? C14 C8E 501 C 1 
HETATM 3 O O15 C8E . . . R 2 -4.829 -4.9 13.017 1 74.11 ? O15 C8E 501 C 1 
HETATM 4 C C16 C8E . . . R 2 -3.668 -5.008 13.819 1 79.88 ? C16 C8E 501 C 1 
HETATM 5 C C17 C8E . . . R 2 -2.607 -5.904 13.176 1 82.21 ? C17 C8E 501 C 1 
HETATM 6 O O18 C8E . . . R 2 -1.388 -5.754 13.877 1 83.12 ? O18 C8E 501 C 1 
HETATM 7 C C19 C8E . . . R 2 -1.051 -6.854 14.689 1 85.65 ? C19 C8E 501 C 1 
HETATM 8 C C20 C8E . . . R 2 0.47 -6.919 14.806 1 85.76 ? C20 C8E 501 C 1 
HETATM 9 O O21 C8E . . . R 2 0.93 -8.228 14.55 1 78.51 ? O21 C8E 501 C 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           544 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           9 
#