data_3SY9 # _model_server_result.job_id OqiHtbQaKlkpTwea2AhRGQ _model_server_result.datetime_utc '2024-10-15 11:21:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sy9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":505}' # _entry.id 3SY9 # _exptl.entry_id 3SY9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.67 _cell.angle_beta 62.57 _cell.angle_gamma 62.95 _cell.entry_id 3SY9 _cell.length_a 93.353 _cell.length_b 102.828 _cell.length_c 101.696 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SY9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,Y 1 1 B,K,L,M,N,O,P,Q,Z 2 1 C,R,S,T,U,V,AA 3 1 D,W,X,BA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 118 n n C1 H11 C8E sing 119 n n C1 H12 C8E sing 120 n n C1 H13 C8E sing 121 n n C2 C3 C8E sing 122 n n C2 H21 C8E sing 123 n n C2 H22 C8E sing 124 n n C3 C4 C8E sing 125 n n C3 H31 C8E sing 126 n n C3 H32 C8E sing 127 n n C4 C5 C8E sing 128 n n C4 H41 C8E sing 129 n n C4 H42 C8E sing 130 n n C5 C6 C8E sing 131 n n C5 H51 C8E sing 132 n n C5 H52 C8E sing 133 n n C6 C7 C8E sing 134 n n C6 H61 C8E sing 135 n n C6 H62 C8E sing 136 n n C7 C8 C8E sing 137 n n C7 H71 C8E sing 138 n n C7 H72 C8E sing 139 n n C8 O9 C8E sing 140 n n C8 H81 C8E sing 141 n n C8 H82 C8E sing 142 n n O9 C10 C8E sing 143 n n C10 C11 C8E sing 144 n n C10 H101 C8E sing 145 n n C10 H102 C8E sing 146 n n C11 O12 C8E sing 147 n n C11 H111 C8E sing 148 n n C11 H112 C8E sing 149 n n O12 C13 C8E sing 150 n n C13 C14 C8E sing 151 n n C13 H131 C8E sing 152 n n C13 H132 C8E sing 153 n n C14 O15 C8E sing 154 n n C14 H141 C8E sing 155 n n C14 H142 C8E sing 156 n n O15 C16 C8E sing 157 n n C16 C17 C8E sing 158 n n C16 H161 C8E sing 159 n n C16 H162 C8E sing 160 n n C17 O18 C8E sing 161 n n C17 H171 C8E sing 162 n n C17 H172 C8E sing 163 n n O18 C19 C8E sing 164 n n C19 C20 C8E sing 165 n n C19 H191 C8E sing 166 n n C19 H192 C8E sing 167 n n C20 O21 C8E sing 168 n n C20 H201 C8E sing 169 n n C20 H202 C8E sing 170 n n O21 HO2 C8E sing 171 n n # _atom_sites.entry_id 3SY9 _atom_sites.fract_transf_matrix[1][1] 0.010712 _atom_sites.fract_transf_matrix[1][2] -0.00547 _atom_sites.fract_transf_matrix[1][3] -0.005532 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010919 _atom_sites.fract_transf_matrix[2][3] -0.000056 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011079 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 C8E A 1 501 1 C8E C8E . F 2 C8E A 1 502 2 C8E C8E . G 2 C8E A 1 503 3 C8E C8E . H 2 C8E A 1 504 5 C8E C8E . I 2 C8E A 1 505 7 C8E C8E . J 3 BOG A 1 506 2 BOG BOG . K 2 C8E B 1 501 9 C8E C8E . L 2 C8E B 1 502 10 C8E C8E . M 2 C8E B 1 503 12 C8E C8E . N 2 C8E B 1 504 13 C8E C8E . O 2 C8E B 1 505 14 C8E C8E . P 2 C8E B 1 506 15 C8E C8E . Q 3 BOG B 1 507 1 BOG BOG . R 2 C8E C 1 501 4 C8E C8E . S 2 C8E C 1 502 6 C8E C8E . T 2 C8E C 1 503 17 C8E C8E . U 2 C8E C 1 504 18 C8E C8E . V 2 C8E C 1 505 19 C8E C8E . W 2 C8E D 1 501 20 C8E C8E . X 2 C8E D 1 502 22 C8E C8E . Y 4 HOH A 1 601 73 HOH HOH . Y 4 HOH A 2 602 74 HOH HOH . Y 4 HOH A 3 603 77 HOH HOH . Y 4 HOH A 4 604 79 HOH HOH . Y 4 HOH A 5 605 88 HOH HOH . Y 4 HOH A 6 606 90 HOH HOH . Y 4 HOH A 7 607 91 HOH HOH . Y 4 HOH A 8 608 95 HOH HOH . Y 4 HOH A 9 609 97 HOH HOH . Y 4 HOH A 10 610 3 HOH HOH . Y 4 HOH A 11 611 4 HOH HOH . Y 4 HOH A 12 612 11 HOH HOH . Y 4 HOH A 13 613 12 HOH HOH . Y 4 HOH A 14 614 13 HOH HOH . Y 4 HOH A 15 615 15 HOH HOH . Y 4 HOH A 16 616 21 HOH HOH . Y 4 HOH A 17 617 26 HOH HOH . Y 4 HOH A 18 618 29 HOH HOH . Y 4 HOH A 19 619 34 HOH HOH . Y 4 HOH A 20 620 36 HOH HOH . Y 4 HOH A 21 621 39 HOH HOH . Y 4 HOH A 22 622 42 HOH HOH . Y 4 HOH A 23 623 43 HOH HOH . Y 4 HOH A 24 624 45 HOH HOH . Y 4 HOH A 25 625 50 HOH HOH . Y 4 HOH A 26 626 51 HOH HOH . Y 4 HOH A 27 627 52 HOH HOH . Y 4 HOH A 28 628 55 HOH HOH . Y 4 HOH A 29 629 56 HOH HOH . Y 4 HOH A 30 630 58 HOH HOH . Y 4 HOH A 31 631 59 HOH HOH . Y 4 HOH A 32 632 64 HOH HOH . Y 4 HOH A 33 633 66 HOH HOH . Y 4 HOH A 34 634 69 HOH HOH . Y 4 HOH A 35 635 83 HOH HOH . Y 4 HOH A 36 636 86 HOH HOH . Y 4 HOH A 37 637 99 HOH HOH . Y 4 HOH A 38 638 100 HOH HOH . Y 4 HOH A 39 639 109 HOH HOH . Y 4 HOH A 40 640 110 HOH HOH . Y 4 HOH A 41 641 113 HOH HOH . Y 4 HOH A 42 642 115 HOH HOH . Z 4 HOH B 1 601 71 HOH HOH . Z 4 HOH B 2 602 78 HOH HOH . Z 4 HOH B 3 603 93 HOH HOH . Z 4 HOH B 4 604 94 HOH HOH . Z 4 HOH B 5 605 6 HOH HOH . Z 4 HOH B 6 606 7 HOH HOH . Z 4 HOH B 7 607 9 HOH HOH . Z 4 HOH B 8 608 16 HOH HOH . Z 4 HOH B 9 609 17 HOH HOH . Z 4 HOH B 10 610 19 HOH HOH . Z 4 HOH B 11 611 22 HOH HOH . Z 4 HOH B 12 612 23 HOH HOH . Z 4 HOH B 13 613 28 HOH HOH . Z 4 HOH B 14 614 40 HOH HOH . Z 4 HOH B 15 615 48 HOH HOH . Z 4 HOH B 16 616 49 HOH HOH . Z 4 HOH B 17 617 54 HOH HOH . Z 4 HOH B 18 618 61 HOH HOH . Z 4 HOH B 19 619 62 HOH HOH . Z 4 HOH B 20 620 65 HOH HOH . Z 4 HOH B 21 621 70 HOH HOH . Z 4 HOH B 22 622 80 HOH HOH . Z 4 HOH B 23 623 98 HOH HOH . Z 4 HOH B 24 624 101 HOH HOH . Z 4 HOH B 25 625 103 HOH HOH . Z 4 HOH B 26 626 106 HOH HOH . Z 4 HOH B 27 627 111 HOH HOH . Z 4 HOH B 28 628 112 HOH HOH . Z 4 HOH B 29 629 118 HOH HOH . Z 4 HOH B 30 630 123 HOH HOH . Z 4 HOH B 31 631 124 HOH HOH . Z 4 HOH B 32 632 125 HOH HOH . AA 4 HOH C 1 601 2 HOH HOH . AA 4 HOH C 2 602 5 HOH HOH . AA 4 HOH C 3 603 10 HOH HOH . AA 4 HOH C 4 604 14 HOH HOH . AA 4 HOH C 5 605 24 HOH HOH . AA 4 HOH C 6 606 25 HOH HOH . AA 4 HOH C 7 607 32 HOH HOH . AA 4 HOH C 8 608 33 HOH HOH . AA 4 HOH C 9 609 37 HOH HOH . AA 4 HOH C 10 610 38 HOH HOH . AA 4 HOH C 11 611 44 HOH HOH . AA 4 HOH C 12 612 53 HOH HOH . AA 4 HOH C 13 613 57 HOH HOH . AA 4 HOH C 14 614 60 HOH HOH . AA 4 HOH C 15 615 63 HOH HOH . AA 4 HOH C 16 616 67 HOH HOH . AA 4 HOH C 17 617 68 HOH HOH . AA 4 HOH C 18 618 72 HOH HOH . AA 4 HOH C 19 619 81 HOH HOH . AA 4 HOH C 20 620 82 HOH HOH . AA 4 HOH C 21 621 89 HOH HOH . AA 4 HOH C 22 622 96 HOH HOH . AA 4 HOH C 23 623 104 HOH HOH . AA 4 HOH C 24 624 105 HOH HOH . AA 4 HOH C 25 625 108 HOH HOH . AA 4 HOH C 26 626 114 HOH HOH . AA 4 HOH C 27 627 119 HOH HOH . AA 4 HOH C 28 628 121 HOH HOH . AA 4 HOH C 29 629 126 HOH HOH . AA 4 HOH C 30 630 127 HOH HOH . AA 4 HOH C 31 631 128 HOH HOH . AA 4 HOH C 32 632 129 HOH HOH . BA 4 HOH D 1 601 1 HOH HOH . BA 4 HOH D 2 602 8 HOH HOH . BA 4 HOH D 3 603 18 HOH HOH . BA 4 HOH D 4 604 20 HOH HOH . BA 4 HOH D 5 605 27 HOH HOH . BA 4 HOH D 6 606 31 HOH HOH . BA 4 HOH D 7 607 35 HOH HOH . BA 4 HOH D 8 608 41 HOH HOH . BA 4 HOH D 9 609 46 HOH HOH . BA 4 HOH D 10 610 47 HOH HOH . BA 4 HOH D 11 611 75 HOH HOH . BA 4 HOH D 12 612 84 HOH HOH . BA 4 HOH D 13 613 85 HOH HOH . BA 4 HOH D 14 614 87 HOH HOH . BA 4 HOH D 15 615 92 HOH HOH . BA 4 HOH D 16 616 102 HOH HOH . BA 4 HOH D 17 617 117 HOH HOH . BA 4 HOH D 18 618 120 HOH HOH . BA 4 HOH D 19 619 122 HOH HOH . BA 4 HOH D 20 620 130 HOH HOH . BA 4 HOH D 21 621 131 HOH HOH . BA 4 HOH D 22 622 132 HOH HOH . BA 4 HOH D 23 623 133 HOH HOH . BA 4 HOH D 24 624 134 HOH HOH . BA 4 HOH D 25 625 135 HOH HOH . BA 4 HOH D 26 626 136 HOH HOH . BA 4 HOH D 27 627 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . I 2 -11.229 -24.442 12.852 1 53.16 ? C1 C8E 505 A 1 HETATM 2 C C2 C8E . . . I 2 -11.089 -23.088 12.143 1 64.7 ? C2 C8E 505 A 1 HETATM 3 C C3 C8E . . . I 2 -11.726 -21.891 12.875 1 63.4 ? C3 C8E 505 A 1 HETATM 4 C C4 C8E . . . I 2 -13.119 -21.59 12.325 1 54.04 ? C4 C8E 505 A 1 HETATM 5 C C5 C8E . . . I 2 -13.565 -20.151 12.567 1 42.42 ? C5 C8E 505 A 1 HETATM 6 C C6 C8E . . . I 2 -15.033 -20.098 13.002 1 42.92 ? C6 C8E 505 A 1 HETATM 7 C C7 C8E . . . I 2 -15.994 -20.513 11.884 1 43.86 ? C7 C8E 505 A 1 HETATM 8 C C8 C8E . . . I 2 -17.456 -20.122 12.133 1 53.84 ? C8 C8E 505 A 1 HETATM 9 O O9 C8E . . . I 2 -18.238 -21.183 12.663 1 63.2 ? O9 C8E 505 A 1 HETATM 10 C C10 C8E . . . I 2 -19.457 -20.765 13.249 1 67.87 ? C10 C8E 505 A 1 HETATM 11 C C11 C8E . . . I 2 -20.237 -21.965 13.785 1 80.72 ? C11 C8E 505 A 1 HETATM 12 O O12 C8E . . . I 2 -19.469 -22.641 14.766 1 94.81 ? O12 C8E 505 A 1 HETATM 13 C C13 C8E . . . I 2 -20.221 -23.324 15.761 1 87.26 ? C13 C8E 505 A 1 HETATM 14 C C14 C8E . . . I 2 -19.423 -23.428 17.067 1 80.98 ? C14 C8E 505 A 1 HETATM 15 O O15 C8E . . . I 2 -18.084 -23.065 16.815 1 80.91 ? O15 C8E 505 A 1 HETATM 16 C C16 C8E . . . I 2 -17.148 -23.377 17.824 1 79.27 ? C16 C8E 505 A 1 HETATM 17 C C17 C8E . . . I 2 -15.94 -22.46 17.627 1 86.11 ? C17 C8E 505 A 1 HETATM 18 O O18 C8E . . . I 2 -14.776 -23.031 18.197 1 98.2 ? O18 C8E 505 A 1 HETATM 19 C C19 C8E . . . I 2 -14.34 -24.237 17.582 1 95.39 ? C19 C8E 505 A 1 HETATM 20 C C20 C8E . . . I 2 -12.811 -24.3 17.506 1 82.48 ? C20 C8E 505 A 1 HETATM 21 O O21 C8E . . . I 2 -12.372 -25.104 16.426 1 72.24 ? O21 C8E 505 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #