data_3SZ0 # _model_server_result.job_id 86Rt46dMVYlm7crRnBTEkQ _model_server_result.datetime_utc '2024-11-23 06:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3sz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 3SZ0 # _exptl.entry_id 3SZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SZ0 _cell.length_a 149.9 _cell.length_b 149.9 _cell.length_c 81.89 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 359 A CYS 356 1_555 F SE SE . A SE 504 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.158 ? covale ? covale2 A SG CYS 359 A CYS 356 1_555 E SE3 6SE . A 6SE 503 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.29 ? covale ? covale3 A SG CYS 163 A CYS 160 1_555 E SE1 6SE . A 6SE 503 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.262 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3SZ0 _atom_sites.fract_transf_matrix[1][1] 0.006671 _atom_sites.fract_transf_matrix[1][2] 0.003852 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 500 500 FAD FAD . C 3 LMT A 1 501 501 LMT LMT . D 4 SO4 A 1 502 502 SO4 SO4 . E 5 6SE A 1 503 503 6SE 6SE . F 6 SE A 1 504 504 SE SE . G 6 SE A 1 505 505 SE SE . H 7 HOH A 1 601 506 HOH HOH . H 7 HOH A 2 602 507 HOH HOH . H 7 HOH A 3 603 508 HOH HOH . H 7 HOH A 4 604 509 HOH HOH . H 7 HOH A 5 605 510 HOH HOH . H 7 HOH A 6 606 511 HOH HOH . H 7 HOH A 7 607 512 HOH HOH . H 7 HOH A 8 608 513 HOH HOH . H 7 HOH A 9 609 514 HOH HOH . H 7 HOH A 10 610 515 HOH HOH . H 7 HOH A 11 611 516 HOH HOH . H 7 HOH A 12 612 517 HOH HOH . H 7 HOH A 13 613 518 HOH HOH . H 7 HOH A 14 614 519 HOH HOH . H 7 HOH A 15 615 520 HOH HOH . H 7 HOH A 16 616 521 HOH HOH . H 7 HOH A 17 617 522 HOH HOH . H 7 HOH A 18 618 523 HOH HOH . H 7 HOH A 19 619 524 HOH HOH . H 7 HOH A 20 620 525 HOH HOH . H 7 HOH A 21 621 526 HOH HOH . H 7 HOH A 22 622 527 HOH HOH . H 7 HOH A 23 623 528 HOH HOH . H 7 HOH A 24 624 529 HOH HOH . H 7 HOH A 25 625 530 HOH HOH . H 7 HOH A 26 626 531 HOH HOH . H 7 HOH A 27 627 532 HOH HOH . H 7 HOH A 28 628 533 HOH HOH . H 7 HOH A 29 629 534 HOH HOH . H 7 HOH A 30 630 535 HOH HOH . H 7 HOH A 31 631 536 HOH HOH . H 7 HOH A 32 632 537 HOH HOH . H 7 HOH A 33 633 538 HOH HOH . H 7 HOH A 34 634 539 HOH HOH . H 7 HOH A 35 635 540 HOH HOH . H 7 HOH A 36 636 541 HOH HOH . H 7 HOH A 37 637 542 HOH HOH . H 7 HOH A 38 638 543 HOH HOH . H 7 HOH A 39 639 544 HOH HOH . H 7 HOH A 40 640 545 HOH HOH . H 7 HOH A 41 641 546 HOH HOH . H 7 HOH A 42 642 547 HOH HOH . H 7 HOH A 43 643 548 HOH HOH . H 7 HOH A 44 644 549 HOH HOH . H 7 HOH A 45 645 550 HOH HOH . H 7 HOH A 46 646 551 HOH HOH . H 7 HOH A 47 647 552 HOH HOH . H 7 HOH A 48 648 553 HOH HOH . H 7 HOH A 49 649 554 HOH HOH . H 7 HOH A 50 650 555 HOH HOH . H 7 HOH A 51 651 556 HOH HOH . H 7 HOH A 52 652 557 HOH HOH . H 7 HOH A 53 653 558 HOH HOH . H 7 HOH A 54 654 559 HOH HOH . H 7 HOH A 55 655 560 HOH HOH . H 7 HOH A 56 656 561 HOH HOH . H 7 HOH A 57 657 562 HOH HOH . H 7 HOH A 58 658 563 HOH HOH . H 7 HOH A 59 659 564 HOH HOH . H 7 HOH A 60 660 565 HOH HOH . H 7 HOH A 61 661 566 HOH HOH . H 7 HOH A 62 662 567 HOH HOH . H 7 HOH A 63 663 568 HOH HOH . H 7 HOH A 64 664 569 HOH HOH . H 7 HOH A 65 665 570 HOH HOH . H 7 HOH A 66 666 571 HOH HOH . H 7 HOH A 67 667 572 HOH HOH . H 7 HOH A 68 668 573 HOH HOH . H 7 HOH A 69 669 574 HOH HOH . H 7 HOH A 70 670 575 HOH HOH . H 7 HOH A 71 671 576 HOH HOH . H 7 HOH A 72 672 577 HOH HOH . H 7 HOH A 73 673 578 HOH HOH . H 7 HOH A 74 674 579 HOH HOH . H 7 HOH A 75 675 580 HOH HOH . H 7 HOH A 76 676 581 HOH HOH . H 7 HOH A 77 677 582 HOH HOH . H 7 HOH A 78 678 583 HOH HOH . H 7 HOH A 79 679 584 HOH HOH . H 7 HOH A 80 680 585 HOH HOH . H 7 HOH A 81 681 586 HOH HOH . H 7 HOH A 82 682 587 HOH HOH . H 7 HOH A 83 683 588 HOH HOH . H 7 HOH A 84 684 589 HOH HOH . H 7 HOH A 85 685 590 HOH HOH . H 7 HOH A 86 686 591 HOH HOH . H 7 HOH A 87 687 592 HOH HOH . H 7 HOH A 88 688 593 HOH HOH . H 7 HOH A 89 689 594 HOH HOH . H 7 HOH A 90 690 595 HOH HOH . H 7 HOH A 91 691 596 HOH HOH . H 7 HOH A 92 692 597 HOH HOH . H 7 HOH A 93 693 598 HOH HOH . H 7 HOH A 94 694 599 HOH HOH . H 7 HOH A 95 695 600 HOH HOH . H 7 HOH A 96 696 601 HOH HOH . H 7 HOH A 97 697 602 HOH HOH . H 7 HOH A 98 698 603 HOH HOH . H 7 HOH A 99 699 604 HOH HOH . H 7 HOH A 100 700 605 HOH HOH . H 7 HOH A 101 701 606 HOH HOH . H 7 HOH A 102 702 607 HOH HOH . H 7 HOH A 103 703 608 HOH HOH . H 7 HOH A 104 704 609 HOH HOH . H 7 HOH A 105 705 610 HOH HOH . H 7 HOH A 106 706 611 HOH HOH . H 7 HOH A 107 707 612 HOH HOH . H 7 HOH A 108 708 613 HOH HOH . H 7 HOH A 109 709 614 HOH HOH . H 7 HOH A 110 710 615 HOH HOH . H 7 HOH A 111 711 616 HOH HOH . H 7 HOH A 112 712 617 HOH HOH . H 7 HOH A 113 713 618 HOH HOH . H 7 HOH A 114 714 619 HOH HOH . H 7 HOH A 115 715 620 HOH HOH . H 7 HOH A 116 716 621 HOH HOH . H 7 HOH A 117 717 622 HOH HOH . H 7 HOH A 118 718 623 HOH HOH . H 7 HOH A 119 719 624 HOH HOH . H 7 HOH A 120 720 625 HOH HOH . H 7 HOH A 121 721 626 HOH HOH . H 7 HOH A 122 722 627 HOH HOH . H 7 HOH A 123 723 628 HOH HOH . H 7 HOH A 124 724 629 HOH HOH . H 7 HOH A 125 725 630 HOH HOH . H 7 HOH A 126 726 631 HOH HOH . H 7 HOH A 127 727 632 HOH HOH . H 7 HOH A 128 728 633 HOH HOH . H 7 HOH A 129 729 634 HOH HOH . H 7 HOH A 130 730 635 HOH HOH . H 7 HOH A 131 731 636 HOH HOH . H 7 HOH A 132 732 637 HOH HOH . H 7 HOH A 133 733 638 HOH HOH . H 7 HOH A 134 734 639 HOH HOH . H 7 HOH A 135 735 640 HOH HOH . H 7 HOH A 136 736 641 HOH HOH . H 7 HOH A 137 737 642 HOH HOH . H 7 HOH A 138 738 643 HOH HOH . H 7 HOH A 139 739 644 HOH HOH . H 7 HOH A 140 740 645 HOH HOH . H 7 HOH A 141 741 646 HOH HOH . H 7 HOH A 142 742 647 HOH HOH . H 7 HOH A 143 743 648 HOH HOH . H 7 HOH A 144 744 649 HOH HOH . H 7 HOH A 145 745 650 HOH HOH . H 7 HOH A 146 746 651 HOH HOH . H 7 HOH A 147 747 652 HOH HOH . H 7 HOH A 148 748 653 HOH HOH . H 7 HOH A 149 749 654 HOH HOH . H 7 HOH A 150 750 655 HOH HOH . H 7 HOH A 151 751 656 HOH HOH . H 7 HOH A 152 752 657 HOH HOH . H 7 HOH A 153 753 658 HOH HOH . H 7 HOH A 154 754 659 HOH HOH . H 7 HOH A 155 755 660 HOH HOH . H 7 HOH A 156 756 661 HOH HOH . H 7 HOH A 157 757 662 HOH HOH . H 7 HOH A 158 758 663 HOH HOH . H 7 HOH A 159 759 664 HOH HOH . H 7 HOH A 160 760 665 HOH HOH . H 7 HOH A 161 761 666 HOH HOH . H 7 HOH A 162 762 667 HOH HOH . H 7 HOH A 163 763 668 HOH HOH . H 7 HOH A 164 764 669 HOH HOH . H 7 HOH A 165 765 670 HOH HOH . H 7 HOH A 166 766 671 HOH HOH . H 7 HOH A 167 767 672 HOH HOH . H 7 HOH A 168 768 673 HOH HOH . H 7 HOH A 169 769 674 HOH HOH . H 7 HOH A 170 770 675 HOH HOH . H 7 HOH A 171 771 676 HOH HOH . H 7 HOH A 172 772 677 HOH HOH . H 7 HOH A 173 773 678 HOH HOH . H 7 HOH A 174 774 679 HOH HOH . H 7 HOH A 175 775 680 HOH HOH . H 7 HOH A 176 776 681 HOH HOH . H 7 HOH A 177 777 682 HOH HOH . H 7 HOH A 178 778 683 HOH HOH . H 7 HOH A 179 779 684 HOH HOH . H 7 HOH A 180 780 685 HOH HOH . H 7 HOH A 181 781 686 HOH HOH . H 7 HOH A 182 782 687 HOH HOH . H 7 HOH A 183 783 688 HOH HOH . H 7 HOH A 184 784 689 HOH HOH . H 7 HOH A 185 785 690 HOH HOH . H 7 HOH A 186 786 691 HOH HOH . H 7 HOH A 187 787 692 HOH HOH . H 7 HOH A 188 788 693 HOH HOH . H 7 HOH A 189 789 694 HOH HOH . H 7 HOH A 190 790 695 HOH HOH . H 7 HOH A 191 791 696 HOH HOH . H 7 HOH A 192 792 697 HOH HOH . H 7 HOH A 193 793 698 HOH HOH . H 7 HOH A 194 794 699 HOH HOH . H 7 HOH A 195 795 700 HOH HOH . H 7 HOH A 196 796 701 HOH HOH . H 7 HOH A 197 797 702 HOH HOH . H 7 HOH A 198 798 703 HOH HOH . H 7 HOH A 199 799 704 HOH HOH . H 7 HOH A 200 800 705 HOH HOH . H 7 HOH A 201 801 706 HOH HOH . H 7 HOH A 202 802 707 HOH HOH . H 7 HOH A 203 803 708 HOH HOH . H 7 HOH A 204 804 709 HOH HOH . H 7 HOH A 205 805 710 HOH HOH . H 7 HOH A 206 806 711 HOH HOH . H 7 HOH A 207 807 712 HOH HOH . H 7 HOH A 208 808 713 HOH HOH . H 7 HOH A 209 809 714 HOH HOH . H 7 HOH A 210 810 715 HOH HOH . H 7 HOH A 211 811 716 HOH HOH . H 7 HOH A 212 812 717 HOH HOH . H 7 HOH A 213 813 718 HOH HOH . H 7 HOH A 214 814 719 HOH HOH . H 7 HOH A 215 815 720 HOH HOH . H 7 HOH A 216 816 721 HOH HOH . H 7 HOH A 217 817 722 HOH HOH . H 7 HOH A 218 818 723 HOH HOH . H 7 HOH A 219 819 724 HOH HOH . H 7 HOH A 220 820 725 HOH HOH . H 7 HOH A 221 821 726 HOH HOH . H 7 HOH A 222 822 727 HOH HOH . H 7 HOH A 223 823 728 HOH HOH . H 7 HOH A 224 824 729 HOH HOH . H 7 HOH A 225 825 730 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . C 3 62.292 1.294 6.296 1 41.25 ? C1B LMT 501 A 1 HETATM 2 C C2B LMT . . . C 3 62.75 2.516 6.999 1 44.85 ? C2B LMT 501 A 1 HETATM 3 C C3B LMT . . . C 3 61.753 2.894 8.016 1 46.94 ? C3B LMT 501 A 1 HETATM 4 C C4B LMT . . . C 3 60.417 3.117 7.397 1 37.15 ? C4B LMT 501 A 1 HETATM 5 C C5B LMT . . . C 3 60.005 1.895 6.604 1 35.92 ? C5B LMT 501 A 1 HETATM 6 C C6B LMT . . . C 3 58.625 2.03 6.049 1 34.29 ? C6B LMT 501 A 1 HETATM 7 O O1B LMT . . . C 3 62.096 0.276 7.216 1 36.4 ? O1B LMT 501 A 1 HETATM 8 O O2B LMT . . . C 3 64.028 2.29 7.591 1 40.35 ? O2B LMT 501 A 1 HETATM 9 O O3B LMT . . . C 3 62.179 4.026 8.779 1 48.34 ? O3B LMT 501 A 1 HETATM 10 O O4' LMT . . . C 3 59.44 3.396 8.386 1 33.89 ? O4' LMT 501 A 1 HETATM 11 O O5B LMT . . . C 3 60.976 1.564 5.613 1 29.56 ? O5B LMT 501 A 1 HETATM 12 O O6B LMT . . . C 3 58.18 0.996 5.22 1 38.24 ? O6B LMT 501 A 1 HETATM 13 C C1' LMT . . . C 3 62.906 -3.721 7.5 1 47.96 ? C1' LMT 501 A 1 HETATM 14 C C2' LMT . . . C 3 64.002 -2.776 7.892 1 43.93 ? C2' LMT 501 A 1 HETATM 15 C C3' LMT . . . C 3 63.48 -1.398 8.073 1 43.85 ? C3' LMT 501 A 1 HETATM 16 C C4' LMT . . . C 3 62.927 -0.869 6.886 1 42.15 ? C4' LMT 501 A 1 HETATM 17 C C5' LMT . . . C 3 62.141 -1.838 6.038 1 47.45 ? C5' LMT 501 A 1 HETATM 18 C C6' LMT . . . C 3 62.711 -1.814 4.691 1 53.15 ? C6' LMT 501 A 1 HETATM 19 O O1' LMT . . . C 3 63.427 -4.964 7.202 1 51.36 ? O1' LMT 501 A 1 HETATM 20 O O2' LMT . . . C 3 64.563 -3.211 9.12 1 46.61 ? O2' LMT 501 A 1 HETATM 21 O O3' LMT . . . C 3 64.557 -0.54 8.495 1 47.45 ? O3' LMT 501 A 1 HETATM 22 O O5' LMT . . . C 3 62.147 -3.289 6.408 1 44.67 ? O5' LMT 501 A 1 HETATM 23 O O6' LMT . . . C 3 62.042 -1.113 3.686 1 40.07 ? O6' LMT 501 A 1 HETATM 24 C C1 LMT . . . C 3 62.776 -6.121 7.644 1 48.3 ? C1 LMT 501 A 1 HETATM 25 C C2 LMT . . . C 3 61.511 -6.57 6.916 1 52.15 ? C2 LMT 501 A 1 HETATM 26 C C3 LMT . . . C 3 61.253 -8.076 6.824 1 43.65 ? C3 LMT 501 A 1 HETATM 27 C C4 LMT . . . C 3 59.932 -8.622 7.383 1 53.37 ? C4 LMT 501 A 1 HETATM 28 C C5 LMT . . . C 3 59.772 -10.102 7.415 1 57.83 ? C5 LMT 501 A 1 HETATM 29 C C6 LMT . . . C 3 58.702 -10.751 6.53 1 55.65 ? C6 LMT 501 A 1 HETATM 30 C C7 LMT . . . C 3 57.314 -10.945 7.13 1 46.34 ? C7 LMT 501 A 1 HETATM 31 C C8 LMT . . . C 3 56.294 -11.779 6.366 1 45.74 ? C8 LMT 501 A 1 HETATM 32 C C9 LMT . . . C 3 56.321 -11.763 4.827 1 53.3 ? C9 LMT 501 A 1 HETATM 33 C C10 LMT . . . C 3 55.29 -10.931 4.096 1 47.13 ? C10 LMT 501 A 1 HETATM 34 C C11 LMT . . . C 3 53.858 -11.255 4.37 1 49.88 ? C11 LMT 501 A 1 HETATM 35 C C12 LMT . . . C 3 53.069 -10.256 5.129 1 47.52 ? C12 LMT 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #