data_3SZ0
#
_model_server_result.job_id            cjORspUDJ_bJMz2jyMnvGg 
_model_server_result.datetime_utc      '2024-11-13 03:49:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3sz0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":504}' 
#
_entry.id    3SZ0 
#
_exptl.entry_id    3SZ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.96 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SELENIUM ATOM' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3SZ0 
_cell.length_a            149.9 
_cell.length_b            149.9 
_cell.length_c            81.89 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3SZ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 359 A CYS 356 1_555 F SE SE . A SE 504 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.158 ? 
covale ? covale2 A SG CYS 359 A CYS 356 1_555 E SE3 6SE . A 6SE 503 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.29 ? 
covale ? covale3 A SG CYS 163 A CYS 160 1_555 E SE1 6SE . A 6SE 503 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.262 ? 
#
_chem_comp.formula           Se 
_chem_comp.formula_weight    78.96 
_chem_comp.id                SE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SELENIUM ATOM' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3SZ0 
_atom_sites.fract_transf_matrix[1][1]    0.006671 
_atom_sites.fract_transf_matrix[1][2]    0.003852 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007703 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012212 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD A 1 500 500 FAD FAD . 
C 3 LMT A 1 501 501 LMT LMT . 
D 4 SO4 A 1 502 502 SO4 SO4 . 
E 5 6SE A 1 503 503 6SE 6SE . 
F 6 SE A 1 504 504 SE SE . 
G 6 SE A 1 505 505 SE SE . 
H 7 HOH A 1 601 506 HOH HOH . 
H 7 HOH A 2 602 507 HOH HOH . 
H 7 HOH A 3 603 508 HOH HOH . 
H 7 HOH A 4 604 509 HOH HOH . 
H 7 HOH A 5 605 510 HOH HOH . 
H 7 HOH A 6 606 511 HOH HOH . 
H 7 HOH A 7 607 512 HOH HOH . 
H 7 HOH A 8 608 513 HOH HOH . 
H 7 HOH A 9 609 514 HOH HOH . 
H 7 HOH A 10 610 515 HOH HOH . 
H 7 HOH A 11 611 516 HOH HOH . 
H 7 HOH A 12 612 517 HOH HOH . 
H 7 HOH A 13 613 518 HOH HOH . 
H 7 HOH A 14 614 519 HOH HOH . 
H 7 HOH A 15 615 520 HOH HOH . 
H 7 HOH A 16 616 521 HOH HOH . 
H 7 HOH A 17 617 522 HOH HOH . 
H 7 HOH A 18 618 523 HOH HOH . 
H 7 HOH A 19 619 524 HOH HOH . 
H 7 HOH A 20 620 525 HOH HOH . 
H 7 HOH A 21 621 526 HOH HOH . 
H 7 HOH A 22 622 527 HOH HOH . 
H 7 HOH A 23 623 528 HOH HOH . 
H 7 HOH A 24 624 529 HOH HOH . 
H 7 HOH A 25 625 530 HOH HOH . 
H 7 HOH A 26 626 531 HOH HOH . 
H 7 HOH A 27 627 532 HOH HOH . 
H 7 HOH A 28 628 533 HOH HOH . 
H 7 HOH A 29 629 534 HOH HOH . 
H 7 HOH A 30 630 535 HOH HOH . 
H 7 HOH A 31 631 536 HOH HOH . 
H 7 HOH A 32 632 537 HOH HOH . 
H 7 HOH A 33 633 538 HOH HOH . 
H 7 HOH A 34 634 539 HOH HOH . 
H 7 HOH A 35 635 540 HOH HOH . 
H 7 HOH A 36 636 541 HOH HOH . 
H 7 HOH A 37 637 542 HOH HOH . 
H 7 HOH A 38 638 543 HOH HOH . 
H 7 HOH A 39 639 544 HOH HOH . 
H 7 HOH A 40 640 545 HOH HOH . 
H 7 HOH A 41 641 546 HOH HOH . 
H 7 HOH A 42 642 547 HOH HOH . 
H 7 HOH A 43 643 548 HOH HOH . 
H 7 HOH A 44 644 549 HOH HOH . 
H 7 HOH A 45 645 550 HOH HOH . 
H 7 HOH A 46 646 551 HOH HOH . 
H 7 HOH A 47 647 552 HOH HOH . 
H 7 HOH A 48 648 553 HOH HOH . 
H 7 HOH A 49 649 554 HOH HOH . 
H 7 HOH A 50 650 555 HOH HOH . 
H 7 HOH A 51 651 556 HOH HOH . 
H 7 HOH A 52 652 557 HOH HOH . 
H 7 HOH A 53 653 558 HOH HOH . 
H 7 HOH A 54 654 559 HOH HOH . 
H 7 HOH A 55 655 560 HOH HOH . 
H 7 HOH A 56 656 561 HOH HOH . 
H 7 HOH A 57 657 562 HOH HOH . 
H 7 HOH A 58 658 563 HOH HOH . 
H 7 HOH A 59 659 564 HOH HOH . 
H 7 HOH A 60 660 565 HOH HOH . 
H 7 HOH A 61 661 566 HOH HOH . 
H 7 HOH A 62 662 567 HOH HOH . 
H 7 HOH A 63 663 568 HOH HOH . 
H 7 HOH A 64 664 569 HOH HOH . 
H 7 HOH A 65 665 570 HOH HOH . 
H 7 HOH A 66 666 571 HOH HOH . 
H 7 HOH A 67 667 572 HOH HOH . 
H 7 HOH A 68 668 573 HOH HOH . 
H 7 HOH A 69 669 574 HOH HOH . 
H 7 HOH A 70 670 575 HOH HOH . 
H 7 HOH A 71 671 576 HOH HOH . 
H 7 HOH A 72 672 577 HOH HOH . 
H 7 HOH A 73 673 578 HOH HOH . 
H 7 HOH A 74 674 579 HOH HOH . 
H 7 HOH A 75 675 580 HOH HOH . 
H 7 HOH A 76 676 581 HOH HOH . 
H 7 HOH A 77 677 582 HOH HOH . 
H 7 HOH A 78 678 583 HOH HOH . 
H 7 HOH A 79 679 584 HOH HOH . 
H 7 HOH A 80 680 585 HOH HOH . 
H 7 HOH A 81 681 586 HOH HOH . 
H 7 HOH A 82 682 587 HOH HOH . 
H 7 HOH A 83 683 588 HOH HOH . 
H 7 HOH A 84 684 589 HOH HOH . 
H 7 HOH A 85 685 590 HOH HOH . 
H 7 HOH A 86 686 591 HOH HOH . 
H 7 HOH A 87 687 592 HOH HOH . 
H 7 HOH A 88 688 593 HOH HOH . 
H 7 HOH A 89 689 594 HOH HOH . 
H 7 HOH A 90 690 595 HOH HOH . 
H 7 HOH A 91 691 596 HOH HOH . 
H 7 HOH A 92 692 597 HOH HOH . 
H 7 HOH A 93 693 598 HOH HOH . 
H 7 HOH A 94 694 599 HOH HOH . 
H 7 HOH A 95 695 600 HOH HOH . 
H 7 HOH A 96 696 601 HOH HOH . 
H 7 HOH A 97 697 602 HOH HOH . 
H 7 HOH A 98 698 603 HOH HOH . 
H 7 HOH A 99 699 604 HOH HOH . 
H 7 HOH A 100 700 605 HOH HOH . 
H 7 HOH A 101 701 606 HOH HOH . 
H 7 HOH A 102 702 607 HOH HOH . 
H 7 HOH A 103 703 608 HOH HOH . 
H 7 HOH A 104 704 609 HOH HOH . 
H 7 HOH A 105 705 610 HOH HOH . 
H 7 HOH A 106 706 611 HOH HOH . 
H 7 HOH A 107 707 612 HOH HOH . 
H 7 HOH A 108 708 613 HOH HOH . 
H 7 HOH A 109 709 614 HOH HOH . 
H 7 HOH A 110 710 615 HOH HOH . 
H 7 HOH A 111 711 616 HOH HOH . 
H 7 HOH A 112 712 617 HOH HOH . 
H 7 HOH A 113 713 618 HOH HOH . 
H 7 HOH A 114 714 619 HOH HOH . 
H 7 HOH A 115 715 620 HOH HOH . 
H 7 HOH A 116 716 621 HOH HOH . 
H 7 HOH A 117 717 622 HOH HOH . 
H 7 HOH A 118 718 623 HOH HOH . 
H 7 HOH A 119 719 624 HOH HOH . 
H 7 HOH A 120 720 625 HOH HOH . 
H 7 HOH A 121 721 626 HOH HOH . 
H 7 HOH A 122 722 627 HOH HOH . 
H 7 HOH A 123 723 628 HOH HOH . 
H 7 HOH A 124 724 629 HOH HOH . 
H 7 HOH A 125 725 630 HOH HOH . 
H 7 HOH A 126 726 631 HOH HOH . 
H 7 HOH A 127 727 632 HOH HOH . 
H 7 HOH A 128 728 633 HOH HOH . 
H 7 HOH A 129 729 634 HOH HOH . 
H 7 HOH A 130 730 635 HOH HOH . 
H 7 HOH A 131 731 636 HOH HOH . 
H 7 HOH A 132 732 637 HOH HOH . 
H 7 HOH A 133 733 638 HOH HOH . 
H 7 HOH A 134 734 639 HOH HOH . 
H 7 HOH A 135 735 640 HOH HOH . 
H 7 HOH A 136 736 641 HOH HOH . 
H 7 HOH A 137 737 642 HOH HOH . 
H 7 HOH A 138 738 643 HOH HOH . 
H 7 HOH A 139 739 644 HOH HOH . 
H 7 HOH A 140 740 645 HOH HOH . 
H 7 HOH A 141 741 646 HOH HOH . 
H 7 HOH A 142 742 647 HOH HOH . 
H 7 HOH A 143 743 648 HOH HOH . 
H 7 HOH A 144 744 649 HOH HOH . 
H 7 HOH A 145 745 650 HOH HOH . 
H 7 HOH A 146 746 651 HOH HOH . 
H 7 HOH A 147 747 652 HOH HOH . 
H 7 HOH A 148 748 653 HOH HOH . 
H 7 HOH A 149 749 654 HOH HOH . 
H 7 HOH A 150 750 655 HOH HOH . 
H 7 HOH A 151 751 656 HOH HOH . 
H 7 HOH A 152 752 657 HOH HOH . 
H 7 HOH A 153 753 658 HOH HOH . 
H 7 HOH A 154 754 659 HOH HOH . 
H 7 HOH A 155 755 660 HOH HOH . 
H 7 HOH A 156 756 661 HOH HOH . 
H 7 HOH A 157 757 662 HOH HOH . 
H 7 HOH A 158 758 663 HOH HOH . 
H 7 HOH A 159 759 664 HOH HOH . 
H 7 HOH A 160 760 665 HOH HOH . 
H 7 HOH A 161 761 666 HOH HOH . 
H 7 HOH A 162 762 667 HOH HOH . 
H 7 HOH A 163 763 668 HOH HOH . 
H 7 HOH A 164 764 669 HOH HOH . 
H 7 HOH A 165 765 670 HOH HOH . 
H 7 HOH A 166 766 671 HOH HOH . 
H 7 HOH A 167 767 672 HOH HOH . 
H 7 HOH A 168 768 673 HOH HOH . 
H 7 HOH A 169 769 674 HOH HOH . 
H 7 HOH A 170 770 675 HOH HOH . 
H 7 HOH A 171 771 676 HOH HOH . 
H 7 HOH A 172 772 677 HOH HOH . 
H 7 HOH A 173 773 678 HOH HOH . 
H 7 HOH A 174 774 679 HOH HOH . 
H 7 HOH A 175 775 680 HOH HOH . 
H 7 HOH A 176 776 681 HOH HOH . 
H 7 HOH A 177 777 682 HOH HOH . 
H 7 HOH A 178 778 683 HOH HOH . 
H 7 HOH A 179 779 684 HOH HOH . 
H 7 HOH A 180 780 685 HOH HOH . 
H 7 HOH A 181 781 686 HOH HOH . 
H 7 HOH A 182 782 687 HOH HOH . 
H 7 HOH A 183 783 688 HOH HOH . 
H 7 HOH A 184 784 689 HOH HOH . 
H 7 HOH A 185 785 690 HOH HOH . 
H 7 HOH A 186 786 691 HOH HOH . 
H 7 HOH A 187 787 692 HOH HOH . 
H 7 HOH A 188 788 693 HOH HOH . 
H 7 HOH A 189 789 694 HOH HOH . 
H 7 HOH A 190 790 695 HOH HOH . 
H 7 HOH A 191 791 696 HOH HOH . 
H 7 HOH A 192 792 697 HOH HOH . 
H 7 HOH A 193 793 698 HOH HOH . 
H 7 HOH A 194 794 699 HOH HOH . 
H 7 HOH A 195 795 700 HOH HOH . 
H 7 HOH A 196 796 701 HOH HOH . 
H 7 HOH A 197 797 702 HOH HOH . 
H 7 HOH A 198 798 703 HOH HOH . 
H 7 HOH A 199 799 704 HOH HOH . 
H 7 HOH A 200 800 705 HOH HOH . 
H 7 HOH A 201 801 706 HOH HOH . 
H 7 HOH A 202 802 707 HOH HOH . 
H 7 HOH A 203 803 708 HOH HOH . 
H 7 HOH A 204 804 709 HOH HOH . 
H 7 HOH A 205 805 710 HOH HOH . 
H 7 HOH A 206 806 711 HOH HOH . 
H 7 HOH A 207 807 712 HOH HOH . 
H 7 HOH A 208 808 713 HOH HOH . 
H 7 HOH A 209 809 714 HOH HOH . 
H 7 HOH A 210 810 715 HOH HOH . 
H 7 HOH A 211 811 716 HOH HOH . 
H 7 HOH A 212 812 717 HOH HOH . 
H 7 HOH A 213 813 718 HOH HOH . 
H 7 HOH A 214 814 719 HOH HOH . 
H 7 HOH A 215 815 720 HOH HOH . 
H 7 HOH A 216 816 721 HOH HOH . 
H 7 HOH A 217 817 722 HOH HOH . 
H 7 HOH A 218 818 723 HOH HOH . 
H 7 HOH A 219 819 724 HOH HOH . 
H 7 HOH A 220 820 725 HOH HOH . 
H 7 HOH A 221 821 726 HOH HOH . 
H 7 HOH A 222 822 727 HOH HOH . 
H 7 HOH A 223 823 728 HOH HOH . 
H 7 HOH A 224 824 729 HOH HOH . 
H 7 HOH A 225 825 730 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           SE 
_atom_site.label_atom_id         SE 
_atom_site.label_comp_id         SE 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          A 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               48.171 
_atom_site.Cartn_y               -14.385 
_atom_site.Cartn_z               4.322 
_atom_site.occupancy             0.14 
_atom_site.B_iso_or_equiv        26.57 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          SE 
_atom_site.auth_comp_id          SE 
_atom_site.auth_seq_id           504 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#