data_3SZF # _model_server_result.job_id UGn1-CNMk4B0g5qTvv6VEQ _model_server_result.datetime_utc '2024-11-13 04:06:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3szf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 3SZF # _exptl.entry_id 3SZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 34.081 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HYDROSULFURIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3SZF _cell.length_a 150.234 _cell.length_b 150.234 _cell.length_c 81.891 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 G N N ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 163 A CYS 160 1_555 H S H2S . A H2S 506 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.035 ? covale ? covale2 A SG CYS 359 A CYS 356 1_555 E S H2S . A H2S 503 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.051 ? covale ? covale3 A SG CYS 163 A CYS 160 1_555 F S1 S3H . A S3H 504 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.051 ? covale ? covale4 A SG CYS 359 A CYS 356 1_555 F S3 S3H . A S3H 504 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.067 ? # _chem_comp.formula 'H2 S' _chem_comp.formula_weight 34.081 _chem_comp.id H2S _chem_comp.mon_nstd_flag . _chem_comp.name 'HYDROSULFURIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'HYDROGEN SULFIDE' # _atom_sites.entry_id 3SZF _atom_sites.fract_transf_matrix[1][1] 0.006656 _atom_sites.fract_transf_matrix[1][2] 0.003843 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 500 500 FAD FAD . C 3 LMT A 1 501 501 LMT LMT . D 4 DCQ A 1 502 502 DCQ DCQ . E 5 H2S A 1 503 503 H2S H2S . F 6 S3H A 1 504 504 S3H S3H . G 5 H2S A 1 505 505 H2S H2S . H 5 H2S A 1 506 506 H2S H2S . I 5 H2S A 1 507 507 H2S H2S . J 7 SO4 A 1 508 508 SO4 SO4 . K 8 HOH A 1 601 509 HOH HOH . K 8 HOH A 2 602 510 HOH HOH . K 8 HOH A 3 603 511 HOH HOH . K 8 HOH A 4 604 512 HOH HOH . K 8 HOH A 5 605 513 HOH HOH . K 8 HOH A 6 606 514 HOH HOH . K 8 HOH A 7 607 515 HOH HOH . K 8 HOH A 8 608 516 HOH HOH . K 8 HOH A 9 609 517 HOH HOH . K 8 HOH A 10 610 518 HOH HOH . K 8 HOH A 11 611 519 HOH HOH . K 8 HOH A 12 612 520 HOH HOH . K 8 HOH A 13 613 521 HOH HOH . K 8 HOH A 14 614 522 HOH HOH . K 8 HOH A 15 615 523 HOH HOH . K 8 HOH A 16 616 524 HOH HOH . K 8 HOH A 17 617 525 HOH HOH . K 8 HOH A 18 618 527 HOH HOH . K 8 HOH A 19 619 528 HOH HOH . K 8 HOH A 20 620 529 HOH HOH . K 8 HOH A 21 621 530 HOH HOH . K 8 HOH A 22 622 531 HOH HOH . K 8 HOH A 23 623 532 HOH HOH . K 8 HOH A 24 624 533 HOH HOH . K 8 HOH A 25 625 534 HOH HOH . K 8 HOH A 26 626 535 HOH HOH . K 8 HOH A 27 627 536 HOH HOH . K 8 HOH A 28 628 537 HOH HOH . K 8 HOH A 29 629 538 HOH HOH . K 8 HOH A 30 630 539 HOH HOH . K 8 HOH A 31 631 540 HOH HOH . K 8 HOH A 32 632 541 HOH HOH . K 8 HOH A 33 633 542 HOH HOH . K 8 HOH A 34 634 543 HOH HOH . K 8 HOH A 35 635 544 HOH HOH . K 8 HOH A 36 636 545 HOH HOH . K 8 HOH A 37 637 546 HOH HOH . K 8 HOH A 38 638 547 HOH HOH . K 8 HOH A 39 639 548 HOH HOH . K 8 HOH A 40 640 549 HOH HOH . K 8 HOH A 41 641 550 HOH HOH . K 8 HOH A 42 642 551 HOH HOH . K 8 HOH A 43 643 552 HOH HOH . K 8 HOH A 44 644 553 HOH HOH . K 8 HOH A 45 645 554 HOH HOH . K 8 HOH A 46 646 555 HOH HOH . K 8 HOH A 47 647 556 HOH HOH . K 8 HOH A 48 648 557 HOH HOH . K 8 HOH A 49 649 558 HOH HOH . K 8 HOH A 50 650 559 HOH HOH . K 8 HOH A 51 651 560 HOH HOH . K 8 HOH A 52 652 561 HOH HOH . K 8 HOH A 53 653 562 HOH HOH . K 8 HOH A 54 654 563 HOH HOH . K 8 HOH A 55 655 564 HOH HOH . K 8 HOH A 56 656 565 HOH HOH . K 8 HOH A 57 657 566 HOH HOH . K 8 HOH A 58 658 567 HOH HOH . K 8 HOH A 59 659 568 HOH HOH . K 8 HOH A 60 660 569 HOH HOH . K 8 HOH A 61 661 570 HOH HOH . K 8 HOH A 62 662 571 HOH HOH . K 8 HOH A 63 663 572 HOH HOH . K 8 HOH A 64 664 573 HOH HOH . K 8 HOH A 65 665 574 HOH HOH . K 8 HOH A 66 666 575 HOH HOH . K 8 HOH A 67 667 576 HOH HOH . K 8 HOH A 68 668 577 HOH HOH . K 8 HOH A 69 669 578 HOH HOH . K 8 HOH A 70 670 579 HOH HOH . K 8 HOH A 71 671 580 HOH HOH . K 8 HOH A 72 672 581 HOH HOH . K 8 HOH A 73 673 582 HOH HOH . K 8 HOH A 74 674 583 HOH HOH . K 8 HOH A 75 675 584 HOH HOH . K 8 HOH A 76 676 585 HOH HOH . K 8 HOH A 77 677 586 HOH HOH . K 8 HOH A 78 678 587 HOH HOH . K 8 HOH A 79 679 588 HOH HOH . K 8 HOH A 80 680 589 HOH HOH . K 8 HOH A 81 681 590 HOH HOH . K 8 HOH A 82 682 591 HOH HOH . K 8 HOH A 83 683 592 HOH HOH . K 8 HOH A 84 684 593 HOH HOH . K 8 HOH A 85 685 594 HOH HOH . K 8 HOH A 86 686 595 HOH HOH . K 8 HOH A 87 687 596 HOH HOH . K 8 HOH A 88 688 597 HOH HOH . K 8 HOH A 89 689 598 HOH HOH . K 8 HOH A 90 690 599 HOH HOH . K 8 HOH A 91 691 600 HOH HOH . K 8 HOH A 92 692 601 HOH HOH . K 8 HOH A 93 693 602 HOH HOH . K 8 HOH A 94 694 603 HOH HOH . K 8 HOH A 95 695 604 HOH HOH . K 8 HOH A 96 696 605 HOH HOH . K 8 HOH A 97 697 606 HOH HOH . K 8 HOH A 98 698 607 HOH HOH . K 8 HOH A 99 699 608 HOH HOH . K 8 HOH A 100 700 609 HOH HOH . K 8 HOH A 101 701 610 HOH HOH . K 8 HOH A 102 702 611 HOH HOH . K 8 HOH A 103 703 612 HOH HOH . K 8 HOH A 104 704 613 HOH HOH . K 8 HOH A 105 705 614 HOH HOH . K 8 HOH A 106 706 615 HOH HOH . K 8 HOH A 107 707 616 HOH HOH . K 8 HOH A 108 708 617 HOH HOH . K 8 HOH A 109 709 618 HOH HOH . K 8 HOH A 110 710 619 HOH HOH . K 8 HOH A 111 711 620 HOH HOH . K 8 HOH A 112 712 621 HOH HOH . K 8 HOH A 113 713 622 HOH HOH . K 8 HOH A 114 714 623 HOH HOH . K 8 HOH A 115 715 624 HOH HOH . K 8 HOH A 116 716 625 HOH HOH . K 8 HOH A 117 717 626 HOH HOH . K 8 HOH A 118 718 627 HOH HOH . K 8 HOH A 119 719 628 HOH HOH . K 8 HOH A 120 720 629 HOH HOH . K 8 HOH A 121 721 630 HOH HOH . K 8 HOH A 122 722 631 HOH HOH . K 8 HOH A 123 723 632 HOH HOH . K 8 HOH A 124 724 633 HOH HOH . K 8 HOH A 125 725 634 HOH HOH . K 8 HOH A 126 726 635 HOH HOH . K 8 HOH A 127 727 636 HOH HOH . K 8 HOH A 128 728 637 HOH HOH . K 8 HOH A 129 729 638 HOH HOH . K 8 HOH A 130 730 639 HOH HOH . K 8 HOH A 131 731 640 HOH HOH . K 8 HOH A 132 732 641 HOH HOH . K 8 HOH A 133 733 642 HOH HOH . K 8 HOH A 134 734 643 HOH HOH . K 8 HOH A 135 735 644 HOH HOH . K 8 HOH A 136 736 645 HOH HOH . K 8 HOH A 137 737 647 HOH HOH . K 8 HOH A 138 738 648 HOH HOH . K 8 HOH A 139 739 649 HOH HOH . K 8 HOH A 140 740 650 HOH HOH . K 8 HOH A 141 741 651 HOH HOH . K 8 HOH A 142 742 652 HOH HOH . K 8 HOH A 143 743 653 HOH HOH . K 8 HOH A 144 744 654 HOH HOH . K 8 HOH A 145 745 655 HOH HOH . K 8 HOH A 146 746 656 HOH HOH . K 8 HOH A 147 747 657 HOH HOH . K 8 HOH A 148 748 658 HOH HOH . K 8 HOH A 149 749 659 HOH HOH . K 8 HOH A 150 750 660 HOH HOH . K 8 HOH A 151 751 661 HOH HOH . K 8 HOH A 152 752 662 HOH HOH . K 8 HOH A 153 753 663 HOH HOH . K 8 HOH A 154 754 664 HOH HOH . K 8 HOH A 155 755 665 HOH HOH . K 8 HOH A 156 756 666 HOH HOH . K 8 HOH A 157 757 667 HOH HOH . K 8 HOH A 158 758 668 HOH HOH . K 8 HOH A 159 759 669 HOH HOH . K 8 HOH A 160 760 670 HOH HOH . K 8 HOH A 161 761 671 HOH HOH . K 8 HOH A 162 762 672 HOH HOH . K 8 HOH A 163 763 673 HOH HOH . K 8 HOH A 164 764 674 HOH HOH . K 8 HOH A 165 765 675 HOH HOH . K 8 HOH A 166 766 676 HOH HOH . K 8 HOH A 167 767 677 HOH HOH . K 8 HOH A 168 768 678 HOH HOH . K 8 HOH A 169 769 679 HOH HOH . K 8 HOH A 170 770 680 HOH HOH . K 8 HOH A 171 771 681 HOH HOH . K 8 HOH A 172 772 682 HOH HOH . K 8 HOH A 173 773 683 HOH HOH . K 8 HOH A 174 774 684 HOH HOH . K 8 HOH A 175 775 685 HOH HOH . K 8 HOH A 176 776 686 HOH HOH . K 8 HOH A 177 777 687 HOH HOH . K 8 HOH A 178 778 688 HOH HOH . K 8 HOH A 179 779 689 HOH HOH . K 8 HOH A 180 780 690 HOH HOH . K 8 HOH A 181 781 691 HOH HOH . K 8 HOH A 182 782 692 HOH HOH . K 8 HOH A 183 783 693 HOH HOH . K 8 HOH A 184 784 694 HOH HOH . K 8 HOH A 185 785 695 HOH HOH . K 8 HOH A 186 786 696 HOH HOH . K 8 HOH A 187 787 697 HOH HOH . K 8 HOH A 188 788 698 HOH HOH . K 8 HOH A 189 789 699 HOH HOH . K 8 HOH A 190 790 700 HOH HOH . K 8 HOH A 191 791 701 HOH HOH . K 8 HOH A 192 792 702 HOH HOH . K 8 HOH A 193 793 703 HOH HOH . K 8 HOH A 194 794 704 HOH HOH . K 8 HOH A 195 795 705 HOH HOH . K 8 HOH A 196 796 706 HOH HOH . K 8 HOH A 197 797 707 HOH HOH . K 8 HOH A 198 798 708 HOH HOH . K 8 HOH A 199 799 709 HOH HOH . K 8 HOH A 200 800 710 HOH HOH . K 8 HOH A 201 801 711 HOH HOH . K 8 HOH A 202 802 712 HOH HOH . K 8 HOH A 203 803 713 HOH HOH . K 8 HOH A 204 804 714 HOH HOH . K 8 HOH A 205 805 715 HOH HOH . K 8 HOH A 206 806 716 HOH HOH . K 8 HOH A 207 807 717 HOH HOH . K 8 HOH A 208 808 718 HOH HOH . K 8 HOH A 209 809 719 HOH HOH . K 8 HOH A 210 810 720 HOH HOH . K 8 HOH A 211 811 721 HOH HOH . K 8 HOH A 212 812 722 HOH HOH . K 8 HOH A 213 813 723 HOH HOH . K 8 HOH A 214 814 724 HOH HOH . K 8 HOH A 215 815 725 HOH HOH . K 8 HOH A 216 816 726 HOH HOH . K 8 HOH A 217 817 727 HOH HOH . K 8 HOH A 218 818 728 HOH HOH . K 8 HOH A 219 819 729 HOH HOH . K 8 HOH A 220 820 730 HOH HOH . K 8 HOH A 221 821 731 HOH HOH . K 8 HOH A 222 822 732 HOH HOH . K 8 HOH A 223 823 733 HOH HOH . K 8 HOH A 224 824 734 HOH HOH . K 8 HOH A 225 825 735 HOH HOH . K 8 HOH A 226 826 736 HOH HOH . K 8 HOH A 227 827 737 HOH HOH . K 8 HOH A 228 828 738 HOH HOH . K 8 HOH A 229 829 739 HOH HOH . K 8 HOH A 230 830 740 HOH HOH . K 8 HOH A 231 831 741 HOH HOH . K 8 HOH A 232 832 742 HOH HOH . K 8 HOH A 233 833 743 HOH HOH . K 8 HOH A 234 834 744 HOH HOH . K 8 HOH A 235 835 745 HOH HOH . K 8 HOH A 236 836 746 HOH HOH . K 8 HOH A 237 837 747 HOH HOH . K 8 HOH A 238 838 748 HOH HOH . K 8 HOH A 239 839 749 HOH HOH . K 8 HOH A 240 840 750 HOH HOH . K 8 HOH A 241 841 751 HOH HOH . K 8 HOH A 242 842 752 HOH HOH . K 8 HOH A 243 843 753 HOH HOH . K 8 HOH A 244 844 754 HOH HOH . K 8 HOH A 245 845 755 HOH HOH . K 8 HOH A 246 846 756 HOH HOH . K 8 HOH A 247 847 757 HOH HOH . K 8 HOH A 248 848 758 HOH HOH . K 8 HOH A 249 849 759 HOH HOH . K 8 HOH A 250 850 760 HOH HOH . K 8 HOH A 251 851 761 HOH HOH . K 8 HOH A 252 852 762 HOH HOH . K 8 HOH A 253 853 763 HOH HOH . K 8 HOH A 254 854 764 HOH HOH . K 8 HOH A 255 855 765 HOH HOH . K 8 HOH A 256 856 766 HOH HOH . K 8 HOH A 257 857 767 HOH HOH . K 8 HOH A 258 858 768 HOH HOH . K 8 HOH A 259 859 769 HOH HOH . K 8 HOH A 260 860 770 HOH HOH . K 8 HOH A 261 861 771 HOH HOH . K 8 HOH A 262 862 772 HOH HOH . K 8 HOH A 263 863 774 HOH HOH . K 8 HOH A 264 864 775 HOH HOH . K 8 HOH A 265 865 776 HOH HOH . K 8 HOH A 266 866 777 HOH HOH . K 8 HOH A 267 867 778 HOH HOH . K 8 HOH A 268 868 779 HOH HOH . K 8 HOH A 269 869 780 HOH HOH . K 8 HOH A 270 870 781 HOH HOH . K 8 HOH A 271 871 782 HOH HOH . K 8 HOH A 272 872 783 HOH HOH . K 8 HOH A 273 873 784 HOH HOH . K 8 HOH A 274 874 785 HOH HOH . K 8 HOH A 275 875 786 HOH HOH . K 8 HOH A 276 876 787 HOH HOH . K 8 HOH A 277 877 788 HOH HOH . K 8 HOH A 278 878 789 HOH HOH . K 8 HOH A 279 879 790 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol S _atom_site.label_atom_id S _atom_site.label_comp_id H2S _atom_site.label_seq_id . _atom_site.label_alt_id A _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 48.558 _atom_site.Cartn_y -14.611 _atom_site.Cartn_z 4.245 _atom_site.occupancy 0.44 _atom_site.B_iso_or_equiv 23.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id S _atom_site.auth_comp_id H2S _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #