data_3SZJ # _model_server_result.job_id 8_22Zi-OfaVkMj8I-qEIww _model_server_result.datetime_utc '2024-11-27 03:10:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3szj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":123}' # _entry.id 3SZJ # _exptl.entry_id 3SZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3SZJ _cell.length_a 42.725 _cell.length_b 56.031 _cell.length_c 86.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3SZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 45 A CYS 45 1_555 A SG CYS 74 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? disulf ? disulf2 B SG CYS 45 B CYS 45 1_555 B SG CYS 74 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 172 n n C1 C2 GOL sing 173 n n C1 H11 GOL sing 174 n n C1 H12 GOL sing 175 n n O1 HO1 GOL sing 176 n n C2 O2 GOL sing 177 n n C2 C3 GOL sing 178 n n C2 H2 GOL sing 179 n n O2 HO2 GOL sing 180 n n C3 O3 GOL sing 181 n n C3 H31 GOL sing 182 n n C3 H32 GOL sing 183 n n O3 HO3 GOL sing 184 n n # _atom_sites.entry_id 3SZJ _atom_sites.fract_transf_matrix[1][1] 0.023406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017847 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011545 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BTN A 1 600 600 BTN BTN . D 3 GOL A 1 123 1 GOL GOL . E 4 CO3 A 1 124 1 CO3 CO3 . F 2 BTN B 1 600 600 BTN BTN . G 5 ACY B 1 123 1 ACY ACY . H 5 ACY B 1 124 2 ACY ACY . I 6 HOH A 1 125 125 HOH HOH . I 6 HOH A 2 126 126 HOH HOH . I 6 HOH A 3 127 127 HOH HOH . I 6 HOH A 4 128 128 HOH HOH . I 6 HOH A 5 129 1 HOH HOH . I 6 HOH A 6 130 2 HOH HOH . I 6 HOH A 7 131 131 HOH HOH . I 6 HOH A 8 132 132 HOH HOH . I 6 HOH A 9 133 133 HOH HOH . I 6 HOH A 10 134 134 HOH HOH . I 6 HOH A 11 135 135 HOH HOH . I 6 HOH A 12 136 5 HOH HOH . I 6 HOH A 13 137 6 HOH HOH . I 6 HOH A 14 138 7 HOH HOH . I 6 HOH A 15 139 8 HOH HOH . I 6 HOH A 16 140 12 HOH HOH . I 6 HOH A 17 141 13 HOH HOH . I 6 HOH A 18 142 142 HOH HOH . I 6 HOH A 19 143 143 HOH HOH . I 6 HOH A 20 144 14 HOH HOH . I 6 HOH A 21 145 145 HOH HOH . I 6 HOH A 22 146 146 HOH HOH . I 6 HOH A 23 147 15 HOH HOH . I 6 HOH A 24 148 17 HOH HOH . I 6 HOH A 25 149 149 HOH HOH . I 6 HOH A 26 150 19 HOH HOH . I 6 HOH A 27 151 21 HOH HOH . I 6 HOH A 28 152 152 HOH HOH . I 6 HOH A 29 153 153 HOH HOH . I 6 HOH A 30 154 22 HOH HOH . I 6 HOH A 31 155 27 HOH HOH . I 6 HOH A 32 156 29 HOH HOH . I 6 HOH A 33 157 30 HOH HOH . I 6 HOH A 34 158 34 HOH HOH . I 6 HOH A 35 159 35 HOH HOH . I 6 HOH A 36 160 160 HOH HOH . I 6 HOH A 37 161 37 HOH HOH . I 6 HOH A 38 162 40 HOH HOH . I 6 HOH A 39 163 41 HOH HOH . I 6 HOH A 40 164 43 HOH HOH . I 6 HOH A 41 165 165 HOH HOH . I 6 HOH A 42 166 44 HOH HOH . I 6 HOH A 43 167 167 HOH HOH . I 6 HOH A 44 168 45 HOH HOH . I 6 HOH A 45 169 49 HOH HOH . I 6 HOH A 46 170 170 HOH HOH . I 6 HOH A 47 171 171 HOH HOH . I 6 HOH A 48 172 51 HOH HOH . I 6 HOH A 49 173 56 HOH HOH . I 6 HOH A 50 174 174 HOH HOH . I 6 HOH A 51 175 57 HOH HOH . I 6 HOH A 52 176 176 HOH HOH . I 6 HOH A 53 177 177 HOH HOH . I 6 HOH A 54 178 58 HOH HOH . I 6 HOH A 55 179 60 HOH HOH . I 6 HOH A 56 180 62 HOH HOH . I 6 HOH A 57 181 66 HOH HOH . I 6 HOH A 58 182 71 HOH HOH . I 6 HOH A 59 183 183 HOH HOH . I 6 HOH A 60 184 76 HOH HOH . I 6 HOH A 61 185 77 HOH HOH . I 6 HOH A 62 186 186 HOH HOH . I 6 HOH A 63 187 80 HOH HOH . I 6 HOH A 64 188 81 HOH HOH . I 6 HOH A 65 189 189 HOH HOH . I 6 HOH A 66 190 190 HOH HOH . I 6 HOH A 67 191 82 HOH HOH . I 6 HOH A 68 192 192 HOH HOH . I 6 HOH A 69 193 193 HOH HOH . I 6 HOH A 70 194 83 HOH HOH . I 6 HOH A 71 195 84 HOH HOH . I 6 HOH A 72 196 86 HOH HOH . I 6 HOH A 73 197 197 HOH HOH . I 6 HOH A 74 198 198 HOH HOH . I 6 HOH A 75 199 91 HOH HOH . I 6 HOH A 76 200 93 HOH HOH . I 6 HOH A 77 201 94 HOH HOH . I 6 HOH A 78 202 97 HOH HOH . I 6 HOH A 79 203 98 HOH HOH . I 6 HOH A 80 204 99 HOH HOH . I 6 HOH A 81 205 102 HOH HOH . I 6 HOH A 82 206 104 HOH HOH . I 6 HOH A 83 207 106 HOH HOH . I 6 HOH A 84 208 107 HOH HOH . I 6 HOH A 85 209 108 HOH HOH . I 6 HOH A 86 210 109 HOH HOH . I 6 HOH A 87 211 110 HOH HOH . I 6 HOH A 88 212 111 HOH HOH . I 6 HOH A 89 213 112 HOH HOH . I 6 HOH A 90 214 114 HOH HOH . I 6 HOH A 91 215 115 HOH HOH . I 6 HOH A 92 216 116 HOH HOH . I 6 HOH A 93 217 119 HOH HOH . I 6 HOH A 94 218 120 HOH HOH . I 6 HOH A 95 219 124 HOH HOH . J 6 HOH B 1 125 3 HOH HOH . J 6 HOH B 2 126 4 HOH HOH . J 6 HOH B 3 127 9 HOH HOH . J 6 HOH B 4 128 10 HOH HOH . J 6 HOH B 5 129 129 HOH HOH . J 6 HOH B 6 130 130 HOH HOH . J 6 HOH B 7 131 11 HOH HOH . J 6 HOH B 8 132 16 HOH HOH . J 6 HOH B 9 133 18 HOH HOH . J 6 HOH B 10 134 20 HOH HOH . J 6 HOH B 11 135 23 HOH HOH . J 6 HOH B 12 136 136 HOH HOH . J 6 HOH B 13 137 137 HOH HOH . J 6 HOH B 14 138 138 HOH HOH . J 6 HOH B 15 139 139 HOH HOH . J 6 HOH B 16 140 140 HOH HOH . J 6 HOH B 17 141 141 HOH HOH . J 6 HOH B 18 142 24 HOH HOH . J 6 HOH B 19 143 25 HOH HOH . J 6 HOH B 20 144 144 HOH HOH . J 6 HOH B 21 145 26 HOH HOH . J 6 HOH B 22 146 28 HOH HOH . J 6 HOH B 23 147 147 HOH HOH . J 6 HOH B 24 148 148 HOH HOH . J 6 HOH B 25 149 31 HOH HOH . J 6 HOH B 26 150 150 HOH HOH . J 6 HOH B 27 151 151 HOH HOH . J 6 HOH B 28 152 32 HOH HOH . J 6 HOH B 29 153 33 HOH HOH . J 6 HOH B 30 154 154 HOH HOH . J 6 HOH B 31 155 155 HOH HOH . J 6 HOH B 32 156 156 HOH HOH . J 6 HOH B 33 157 157 HOH HOH . J 6 HOH B 34 158 158 HOH HOH . J 6 HOH B 35 159 159 HOH HOH . J 6 HOH B 36 160 36 HOH HOH . J 6 HOH B 37 161 161 HOH HOH . J 6 HOH B 38 162 162 HOH HOH . J 6 HOH B 39 163 163 HOH HOH . J 6 HOH B 40 164 164 HOH HOH . J 6 HOH B 41 165 38 HOH HOH . J 6 HOH B 42 166 166 HOH HOH . J 6 HOH B 43 167 39 HOH HOH . J 6 HOH B 44 168 168 HOH HOH . J 6 HOH B 45 169 169 HOH HOH . J 6 HOH B 46 170 42 HOH HOH . J 6 HOH B 47 171 46 HOH HOH . J 6 HOH B 48 172 172 HOH HOH . J 6 HOH B 49 173 173 HOH HOH . J 6 HOH B 50 174 47 HOH HOH . J 6 HOH B 51 175 175 HOH HOH . J 6 HOH B 52 176 48 HOH HOH . J 6 HOH B 53 177 50 HOH HOH . J 6 HOH B 54 178 52 HOH HOH . J 6 HOH B 55 179 179 HOH HOH . J 6 HOH B 56 180 180 HOH HOH . J 6 HOH B 57 181 181 HOH HOH . J 6 HOH B 58 182 182 HOH HOH . J 6 HOH B 59 183 53 HOH HOH . J 6 HOH B 60 184 184 HOH HOH . J 6 HOH B 61 185 185 HOH HOH . J 6 HOH B 62 186 54 HOH HOH . J 6 HOH B 63 187 187 HOH HOH . J 6 HOH B 64 188 188 HOH HOH . J 6 HOH B 65 189 55 HOH HOH . J 6 HOH B 66 190 59 HOH HOH . J 6 HOH B 67 191 191 HOH HOH . J 6 HOH B 68 192 61 HOH HOH . J 6 HOH B 69 193 63 HOH HOH . J 6 HOH B 70 194 194 HOH HOH . J 6 HOH B 71 195 195 HOH HOH . J 6 HOH B 72 196 196 HOH HOH . J 6 HOH B 73 197 64 HOH HOH . J 6 HOH B 74 198 65 HOH HOH . J 6 HOH B 75 199 67 HOH HOH . J 6 HOH B 76 200 68 HOH HOH . J 6 HOH B 77 201 69 HOH HOH . J 6 HOH B 78 202 70 HOH HOH . J 6 HOH B 79 203 72 HOH HOH . J 6 HOH B 80 204 73 HOH HOH . J 6 HOH B 81 205 74 HOH HOH . J 6 HOH B 82 206 75 HOH HOH . J 6 HOH B 83 207 78 HOH HOH . J 6 HOH B 84 208 79 HOH HOH . J 6 HOH B 85 209 85 HOH HOH . J 6 HOH B 86 210 87 HOH HOH . J 6 HOH B 87 211 88 HOH HOH . J 6 HOH B 88 212 89 HOH HOH . J 6 HOH B 89 213 90 HOH HOH . J 6 HOH B 90 214 92 HOH HOH . J 6 HOH B 91 215 95 HOH HOH . J 6 HOH B 92 216 96 HOH HOH . J 6 HOH B 93 217 100 HOH HOH . J 6 HOH B 94 218 101 HOH HOH . J 6 HOH B 95 219 103 HOH HOH . J 6 HOH B 96 220 105 HOH HOH . J 6 HOH B 97 221 113 HOH HOH . J 6 HOH B 98 222 117 HOH HOH . J 6 HOH B 99 223 118 HOH HOH . J 6 HOH B 100 224 121 HOH HOH . J 6 HOH B 101 225 122 HOH HOH . J 6 HOH B 102 226 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -8.275 13.446 20.175 1 26.07 ? C1 GOL 123 A 1 HETATM 2 O O1 GOL . . . D 3 -8.223 14.868 20.37 1 23.11 ? O1 GOL 123 A 1 HETATM 3 C C2 GOL . . . D 3 -7.031 12.71 20.672 1 28.14 ? C2 GOL 123 A 1 HETATM 4 O O2 GOL . . . D 3 -5.913 13.352 20.127 1 29.62 ? O2 GOL 123 A 1 HETATM 5 C C3 GOL . . . D 3 -6.997 11.243 20.252 1 29.93 ? C3 GOL 123 A 1 HETATM 6 O O3 GOL . . . D 3 -5.721 10.701 20.537 1 31.7 ? O3 GOL 123 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #