data_3T0T
#
_model_server_result.job_id            B03KRURJjBEUTAFCvNZdkA 
_model_server_result.datetime_utc      '2025-02-26 21:54:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3t0t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":586}' 
#
_entry.id    3T0T 
#
_exptl.entry_id    3T0T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              373.204 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N'-[(1E)-1-(1H-benzimidazol-2-yl)ethylidene]-5-bromo-2-hydroxybenzohydrazide" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3T0T 
_cell.length_a            113.09 
_cell.length_b            113.09 
_cell.length_c            315.96 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3T0T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 I N N 
#
_chem_comp.formula           'C16 H13 Br N4 O2' 
_chem_comp.formula_weight    373.204 
_chem_comp.id                I30 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N'-[(1E)-1-(1H-benzimidazol-2-yl)ethylidene]-5-bromo-2-hydroxybenzohydrazide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAP I30 sing 150 n n 
OAB CAQ I30 doub 151 n n 
OAC CAS I30 sing 152 n n 
BRAD CAR I30 sing 153 n n 
CAE CAF I30 doub 154 n y 
CAE CAI I30 sing 155 n y 
CAF CAJ I30 sing 156 n y 
CAG CAH I30 doub 157 n y 
CAG CAR I30 sing 158 n y 
CAH CAS I30 sing 159 n y 
CAI CAV I30 doub 160 n y 
CAJ CAW I30 doub 161 n y 
CAK CAR I30 doub 162 n y 
CAK CAT I30 sing 163 n y 
NAL NAN I30 sing 164 n n 
NAL CAP I30 doub 165 e n 
NAM CAU I30 sing 166 n y 
NAM CAV I30 sing 167 n y 
NAN CAQ I30 sing 168 n n 
NAO CAU I30 doub 169 n y 
NAO CAW I30 sing 170 n y 
CAP CAU I30 sing 171 n n 
CAQ CAT I30 sing 172 n n 
CAS CAT I30 doub 173 n y 
CAV CAW I30 sing 174 n y 
CAA HAA I30 sing 175 n n 
CAA HAAA I30 sing 176 n n 
CAA HAAB I30 sing 177 n n 
OAC HOAC I30 sing 178 n n 
CAE HAE I30 sing 179 n n 
CAF HAF I30 sing 180 n n 
CAG HAG I30 sing 181 n n 
CAH HAH I30 sing 182 n n 
CAI HAI I30 sing 183 n n 
CAJ HAJ I30 sing 184 n n 
CAK HAK I30 sing 185 n n 
NAM HNAM I30 sing 186 n n 
NAN HNAN I30 sing 187 n n 
#
_atom_sites.entry_id                     3T0T 
_atom_sites.fract_transf_matrix[1][1]    0.008843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008843 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003165 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 I30 A 1 586 1 I30 I30 . 
F 3 PO4 A 1 587 1 PO4 PO4 . 
G 3 PO4 B 1 586 2 PO4 PO4 . 
H 3 PO4 C 1 586 3 PO4 PO4 . 
I 2 I30 D 1 586 2 I30 I30 . 
J 3 PO4 D 1 587 4 PO4 PO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA I30 . . . I 2 25.35 2.784 10.118 1 60.71 ? CAA I30 586 D 1 
HETATM 2 O OAB I30 . . . I 2 26.655 1.531 14.776 1 79.87 ? OAB I30 586 D 1 
HETATM 3 O OAC I30 . . . I 2 28.016 0.632 11.15 1 81.23 ? OAC I30 586 D 1 
HETATM 4 BR BRAD I30 . . . I 2 31.019 -2.189 15.48 1 103.39 ? BRAD I30 586 D 1 
HETATM 5 C CAE I30 . . . I 2 21.061 6.678 14.031 1 50.63 ? CAE I30 586 D 1 
HETATM 6 C CAF I30 . . . I 2 20.967 7.16 12.756 1 56.53 ? CAF I30 586 D 1 
HETATM 7 C CAG I30 . . . I 2 30.412 -1.47 12.875 1 85.23 ? CAG I30 586 D 1 
HETATM 8 C CAH I30 . . . I 2 29.74 -0.827 11.855 1 86.95 ? CAH I30 586 D 1 
HETATM 9 C CAI I30 . . . I 2 21.935 5.643 14.258 1 58.15 ? CAI I30 586 D 1 
HETATM 10 C CAJ I30 . . . I 2 21.727 6.611 11.725 1 61.21 ? CAJ I30 586 D 1 
HETATM 11 C CAK I30 . . . I 2 28.933 -0.436 14.492 1 79.58 ? CAK I30 586 D 1 
HETATM 12 N NAL I30 . . . I 2 25.652 2.506 12.614 1 70.49 ? NAL I30 586 D 1 
HETATM 13 N NAM I30 . . . I 2 23.626 4.124 13.223 1 69.2 ? NAM I30 586 D 1 
HETATM 14 N NAN I30 . . . I 2 26.55 1.681 12.524 1 73.7 ? NAN I30 586 D 1 
HETATM 15 N NAO I30 . . . I 2 23.468 4.897 11.195 1 64.2 ? NAO I30 586 D 1 
HETATM 16 C CAP I30 . . . I 2 25.029 3.071 11.588 1 66.5 ? CAP I30 586 D 1 
HETATM 17 C CAQ I30 . . . I 2 27.047 1.172 13.659 1 79.46 ? CAQ I30 586 D 1 
HETATM 18 C CAR I30 . . . I 2 30.011 -1.271 14.181 1 84.15 ? CAR I30 586 D 1 
HETATM 19 C CAS I30 . . . I 2 28.671 0.001 12.155 1 81.66 ? CAS I30 586 D 1 
HETATM 20 C CAT I30 . . . I 2 28.238 0.195 13.457 1 78.26 ? CAT I30 586 D 1 
HETATM 21 C CAU I30 . . . I 2 24.065 3.987 11.965 1 67.07 ? CAU I30 586 D 1 
HETATM 22 C CAV I30 . . . I 2 22.717 5.1 13.245 1 65.37 ? CAV I30 586 D 1 
HETATM 23 C CAW I30 . . . I 2 22.619 5.585 11.96 1 63.23 ? CAW I30 586 D 1 
#
_model_server_stats.io_time_ms              90 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#