data_3T0X # _model_server_result.job_id DFYke7r6wZqpIDUZogVRSw _model_server_result.datetime_utc '2024-12-21 14:17:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":207}' # _entry.id 3T0X # _exptl.entry_id 3T0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3T0X _cell.length_a 83.494 _cell.length_b 83.494 _cell.length_c 76.347 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 23 1_555 A SG CYS 89 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 B SG CYS 22 B CYS 23 1_555 B SG CYS 89 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? covale ? covale1 A C PCA 1 A PCA 1 1_555 A N PRO 2 A PRO 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale2 B C PCA 1 B PCA 1 1_555 B N PRO 2 B PRO 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 147 n n C1 C2 EDO sing 148 n n C1 H11 EDO sing 149 n n C1 H12 EDO sing 150 n n O1 HO1 EDO sing 151 n n C2 O2 EDO sing 152 n n C2 H21 EDO sing 153 n n C2 H22 EDO sing 154 n n O2 HO2 EDO sing 155 n n # _atom_sites.entry_id 3T0X _atom_sites.fract_transf_matrix[1][1] 0.011977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DIW A 1 201 110 DIW DIW . D 3 EDO A 1 202 111 EDO EDO . E 3 EDO A 1 203 112 EDO EDO . F 3 EDO A 1 204 113 EDO EDO . G 3 EDO A 1 205 114 EDO EDO . H 3 EDO A 1 206 115 EDO EDO . I 3 EDO A 1 207 116 EDO EDO . J 3 EDO A 1 208 117 EDO EDO . K 4 SO4 B 1 201 110 SO4 SO4 . L 5 HOH A 1 301 118 HOH HOH . L 5 HOH A 2 302 119 HOH HOH . L 5 HOH A 3 303 120 HOH HOH . L 5 HOH A 4 304 121 HOH HOH . L 5 HOH A 5 305 122 HOH HOH . L 5 HOH A 6 306 123 HOH HOH . L 5 HOH A 7 307 124 HOH HOH . L 5 HOH A 8 308 125 HOH HOH . L 5 HOH A 9 309 126 HOH HOH . L 5 HOH A 10 310 127 HOH HOH . L 5 HOH A 11 311 128 HOH HOH . L 5 HOH A 12 312 129 HOH HOH . L 5 HOH A 13 313 130 HOH HOH . L 5 HOH A 14 314 131 HOH HOH . L 5 HOH A 15 315 132 HOH HOH . L 5 HOH A 16 316 133 HOH HOH . L 5 HOH A 17 317 134 HOH HOH . L 5 HOH A 18 318 135 HOH HOH . L 5 HOH A 19 319 136 HOH HOH . L 5 HOH A 20 320 137 HOH HOH . L 5 HOH A 21 321 138 HOH HOH . L 5 HOH A 22 322 139 HOH HOH . L 5 HOH A 23 323 140 HOH HOH . L 5 HOH A 24 324 141 HOH HOH . L 5 HOH A 25 325 142 HOH HOH . L 5 HOH A 26 326 143 HOH HOH . L 5 HOH A 27 327 144 HOH HOH . L 5 HOH A 28 328 145 HOH HOH . L 5 HOH A 29 329 146 HOH HOH . L 5 HOH A 30 330 147 HOH HOH . L 5 HOH A 31 331 148 HOH HOH . L 5 HOH A 32 332 149 HOH HOH . L 5 HOH A 33 333 150 HOH HOH . L 5 HOH A 34 334 151 HOH HOH . L 5 HOH A 35 335 152 HOH HOH . L 5 HOH A 36 336 153 HOH HOH . L 5 HOH A 37 337 154 HOH HOH . L 5 HOH A 38 338 155 HOH HOH . L 5 HOH A 39 339 156 HOH HOH . L 5 HOH A 40 340 157 HOH HOH . L 5 HOH A 41 341 158 HOH HOH . L 5 HOH A 42 342 159 HOH HOH . L 5 HOH A 43 343 160 HOH HOH . L 5 HOH A 44 344 161 HOH HOH . L 5 HOH A 45 345 162 HOH HOH . L 5 HOH A 46 346 163 HOH HOH . L 5 HOH A 47 347 164 HOH HOH . L 5 HOH A 48 348 165 HOH HOH . L 5 HOH A 49 349 166 HOH HOH . L 5 HOH A 50 350 167 HOH HOH . L 5 HOH A 51 351 168 HOH HOH . L 5 HOH A 52 352 169 HOH HOH . L 5 HOH A 53 353 170 HOH HOH . L 5 HOH A 54 354 171 HOH HOH . L 5 HOH A 55 355 172 HOH HOH . L 5 HOH A 56 356 173 HOH HOH . L 5 HOH A 57 357 174 HOH HOH . L 5 HOH A 58 358 175 HOH HOH . L 5 HOH A 59 359 176 HOH HOH . L 5 HOH A 60 360 177 HOH HOH . L 5 HOH A 61 361 178 HOH HOH . L 5 HOH A 62 362 179 HOH HOH . L 5 HOH A 63 363 180 HOH HOH . L 5 HOH A 64 364 181 HOH HOH . L 5 HOH A 65 365 182 HOH HOH . L 5 HOH A 66 366 183 HOH HOH . L 5 HOH A 67 367 184 HOH HOH . L 5 HOH A 68 368 185 HOH HOH . L 5 HOH A 69 369 186 HOH HOH . L 5 HOH A 70 370 187 HOH HOH . L 5 HOH A 71 371 188 HOH HOH . L 5 HOH A 72 372 189 HOH HOH . L 5 HOH A 73 373 190 HOH HOH . L 5 HOH A 74 374 191 HOH HOH . L 5 HOH A 75 375 192 HOH HOH . L 5 HOH A 76 376 193 HOH HOH . L 5 HOH A 77 377 194 HOH HOH . L 5 HOH A 78 378 195 HOH HOH . L 5 HOH A 79 379 196 HOH HOH . L 5 HOH A 80 380 197 HOH HOH . L 5 HOH A 81 381 198 HOH HOH . L 5 HOH A 82 382 199 HOH HOH . M 5 HOH B 1 301 10 HOH HOH . M 5 HOH B 2 302 111 HOH HOH . M 5 HOH B 3 303 112 HOH HOH . M 5 HOH B 4 304 113 HOH HOH . M 5 HOH B 5 305 114 HOH HOH . M 5 HOH B 6 306 115 HOH HOH . M 5 HOH B 7 307 116 HOH HOH . M 5 HOH B 8 308 117 HOH HOH . M 5 HOH B 9 309 118 HOH HOH . M 5 HOH B 10 310 119 HOH HOH . M 5 HOH B 11 311 120 HOH HOH . M 5 HOH B 12 312 121 HOH HOH . M 5 HOH B 13 313 122 HOH HOH . M 5 HOH B 14 314 123 HOH HOH . M 5 HOH B 15 315 124 HOH HOH . M 5 HOH B 16 316 125 HOH HOH . M 5 HOH B 17 317 126 HOH HOH . M 5 HOH B 18 318 127 HOH HOH . M 5 HOH B 19 319 128 HOH HOH . M 5 HOH B 20 320 129 HOH HOH . M 5 HOH B 21 321 130 HOH HOH . M 5 HOH B 22 322 131 HOH HOH . M 5 HOH B 23 323 132 HOH HOH . M 5 HOH B 24 324 133 HOH HOH . M 5 HOH B 25 325 134 HOH HOH . M 5 HOH B 26 326 135 HOH HOH . M 5 HOH B 27 327 136 HOH HOH . M 5 HOH B 28 328 137 HOH HOH . M 5 HOH B 29 329 138 HOH HOH . M 5 HOH B 30 330 139 HOH HOH . M 5 HOH B 31 331 140 HOH HOH . M 5 HOH B 32 332 141 HOH HOH . M 5 HOH B 33 333 142 HOH HOH . M 5 HOH B 34 334 143 HOH HOH . M 5 HOH B 35 335 144 HOH HOH . M 5 HOH B 36 336 145 HOH HOH . M 5 HOH B 37 337 146 HOH HOH . M 5 HOH B 38 338 147 HOH HOH . M 5 HOH B 39 339 148 HOH HOH . M 5 HOH B 40 340 149 HOH HOH . M 5 HOH B 41 341 150 HOH HOH . M 5 HOH B 42 342 151 HOH HOH . M 5 HOH B 43 343 152 HOH HOH . M 5 HOH B 44 344 153 HOH HOH . M 5 HOH B 45 345 154 HOH HOH . M 5 HOH B 46 346 155 HOH HOH . M 5 HOH B 47 347 156 HOH HOH . M 5 HOH B 48 348 157 HOH HOH . M 5 HOH B 49 349 158 HOH HOH . M 5 HOH B 50 350 159 HOH HOH . M 5 HOH B 51 351 160 HOH HOH . M 5 HOH B 52 352 161 HOH HOH . M 5 HOH B 53 353 162 HOH HOH . M 5 HOH B 54 354 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 3 41.87 12.204 -26.491 1 44.57 ? C1 EDO 207 A 1 HETATM 2 O O1 EDO . . . I 3 40.65 11.532 -26.832 1 44.9 ? O1 EDO 207 A 1 HETATM 3 C C2 EDO . . . I 3 42.387 11.634 -25.18 1 49.04 ? C2 EDO 207 A 1 HETATM 4 O O2 EDO . . . I 3 42.55 10.216 -25.32 1 56.8 ? O2 EDO 207 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #