data_3T2K # _model_server_result.job_id mQFAOT75uHAUeCxYiG82fw _model_server_result.datetime_utc '2024-11-26 23:06:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 3T2K # _exptl.entry_id 3T2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3T2K _cell.length_a 150.27 _cell.length_b 150.27 _cell.length_c 81.7 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 359 A CYS 356 1_555 E S1 S3H . A S3H 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? covale ? covale2 A SG CYS 163 A CYS 160 1_555 E S3 S3H . A S3H 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3T2K _atom_sites.fract_transf_matrix[1][1] 0.006655 _atom_sites.fract_transf_matrix[1][2] 0.003842 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007684 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01224 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 500 500 FAD FAD . C 3 LMT A 1 501 501 LMT LMT . D 4 SO4 A 1 502 502 SO4 SO4 . E 5 S3H A 1 503 503 S3H S3H . F 6 HOH A 1 504 504 HOH HOH . F 6 HOH A 2 505 505 HOH HOH . F 6 HOH A 3 506 506 HOH HOH . F 6 HOH A 4 507 507 HOH HOH . F 6 HOH A 5 508 508 HOH HOH . F 6 HOH A 6 509 509 HOH HOH . F 6 HOH A 7 510 510 HOH HOH . F 6 HOH A 8 511 511 HOH HOH . F 6 HOH A 9 512 512 HOH HOH . F 6 HOH A 10 513 513 HOH HOH . F 6 HOH A 11 514 514 HOH HOH . F 6 HOH A 12 515 515 HOH HOH . F 6 HOH A 13 516 516 HOH HOH . F 6 HOH A 14 517 517 HOH HOH . F 6 HOH A 15 518 518 HOH HOH . F 6 HOH A 16 519 519 HOH HOH . F 6 HOH A 17 520 520 HOH HOH . F 6 HOH A 18 521 521 HOH HOH . F 6 HOH A 19 522 522 HOH HOH . F 6 HOH A 20 523 523 HOH HOH . F 6 HOH A 21 524 524 HOH HOH . F 6 HOH A 22 525 525 HOH HOH . F 6 HOH A 23 526 526 HOH HOH . F 6 HOH A 24 527 527 HOH HOH . F 6 HOH A 25 528 528 HOH HOH . F 6 HOH A 26 529 529 HOH HOH . F 6 HOH A 27 530 530 HOH HOH . F 6 HOH A 28 531 531 HOH HOH . F 6 HOH A 29 532 532 HOH HOH . F 6 HOH A 30 533 533 HOH HOH . F 6 HOH A 31 534 534 HOH HOH . F 6 HOH A 32 535 535 HOH HOH . F 6 HOH A 33 536 536 HOH HOH . F 6 HOH A 34 537 537 HOH HOH . F 6 HOH A 35 538 538 HOH HOH . F 6 HOH A 36 539 539 HOH HOH . F 6 HOH A 37 540 540 HOH HOH . F 6 HOH A 38 541 541 HOH HOH . F 6 HOH A 39 542 542 HOH HOH . F 6 HOH A 40 543 543 HOH HOH . F 6 HOH A 41 544 544 HOH HOH . F 6 HOH A 42 545 545 HOH HOH . F 6 HOH A 43 546 546 HOH HOH . F 6 HOH A 44 547 547 HOH HOH . F 6 HOH A 45 548 548 HOH HOH . F 6 HOH A 46 549 549 HOH HOH . F 6 HOH A 47 550 550 HOH HOH . F 6 HOH A 48 551 551 HOH HOH . F 6 HOH A 49 552 552 HOH HOH . F 6 HOH A 50 553 553 HOH HOH . F 6 HOH A 51 554 554 HOH HOH . F 6 HOH A 52 555 555 HOH HOH . F 6 HOH A 53 556 556 HOH HOH . F 6 HOH A 54 557 557 HOH HOH . F 6 HOH A 55 558 558 HOH HOH . F 6 HOH A 56 559 559 HOH HOH . F 6 HOH A 57 560 560 HOH HOH . F 6 HOH A 58 561 561 HOH HOH . F 6 HOH A 59 562 562 HOH HOH . F 6 HOH A 60 563 563 HOH HOH . F 6 HOH A 61 564 564 HOH HOH . F 6 HOH A 62 565 565 HOH HOH . F 6 HOH A 63 566 566 HOH HOH . F 6 HOH A 64 567 567 HOH HOH . F 6 HOH A 65 568 568 HOH HOH . F 6 HOH A 66 569 569 HOH HOH . F 6 HOH A 67 570 570 HOH HOH . F 6 HOH A 68 571 571 HOH HOH . F 6 HOH A 69 572 572 HOH HOH . F 6 HOH A 70 573 573 HOH HOH . F 6 HOH A 71 574 574 HOH HOH . F 6 HOH A 72 575 575 HOH HOH . F 6 HOH A 73 576 576 HOH HOH . F 6 HOH A 74 577 577 HOH HOH . F 6 HOH A 75 578 578 HOH HOH . F 6 HOH A 76 579 579 HOH HOH . F 6 HOH A 77 580 580 HOH HOH . F 6 HOH A 78 581 581 HOH HOH . F 6 HOH A 79 582 582 HOH HOH . F 6 HOH A 80 583 583 HOH HOH . F 6 HOH A 81 584 584 HOH HOH . F 6 HOH A 82 585 585 HOH HOH . F 6 HOH A 83 586 586 HOH HOH . F 6 HOH A 84 587 587 HOH HOH . F 6 HOH A 85 588 588 HOH HOH . F 6 HOH A 86 589 589 HOH HOH . F 6 HOH A 87 590 590 HOH HOH . F 6 HOH A 88 591 591 HOH HOH . F 6 HOH A 89 592 592 HOH HOH . F 6 HOH A 90 593 593 HOH HOH . F 6 HOH A 91 594 594 HOH HOH . F 6 HOH A 92 595 595 HOH HOH . F 6 HOH A 93 596 596 HOH HOH . F 6 HOH A 94 597 597 HOH HOH . F 6 HOH A 95 598 598 HOH HOH . F 6 HOH A 96 600 600 HOH HOH . F 6 HOH A 97 601 601 HOH HOH . F 6 HOH A 98 602 602 HOH HOH . F 6 HOH A 99 603 603 HOH HOH . F 6 HOH A 100 604 604 HOH HOH . F 6 HOH A 101 605 605 HOH HOH . F 6 HOH A 102 606 606 HOH HOH . F 6 HOH A 103 607 607 HOH HOH . F 6 HOH A 104 608 608 HOH HOH . F 6 HOH A 105 609 609 HOH HOH . F 6 HOH A 106 610 610 HOH HOH . F 6 HOH A 107 611 611 HOH HOH . F 6 HOH A 108 612 612 HOH HOH . F 6 HOH A 109 613 613 HOH HOH . F 6 HOH A 110 614 614 HOH HOH . F 6 HOH A 111 615 615 HOH HOH . F 6 HOH A 112 616 616 HOH HOH . F 6 HOH A 113 617 617 HOH HOH . F 6 HOH A 114 618 618 HOH HOH . F 6 HOH A 115 619 619 HOH HOH . F 6 HOH A 116 620 620 HOH HOH . F 6 HOH A 117 621 621 HOH HOH . F 6 HOH A 118 622 622 HOH HOH . F 6 HOH A 119 623 623 HOH HOH . F 6 HOH A 120 624 624 HOH HOH . F 6 HOH A 121 625 625 HOH HOH . F 6 HOH A 122 626 626 HOH HOH . F 6 HOH A 123 627 627 HOH HOH . F 6 HOH A 124 628 628 HOH HOH . F 6 HOH A 125 629 629 HOH HOH . F 6 HOH A 126 630 630 HOH HOH . F 6 HOH A 127 631 631 HOH HOH . F 6 HOH A 128 632 632 HOH HOH . F 6 HOH A 129 633 633 HOH HOH . F 6 HOH A 130 634 634 HOH HOH . F 6 HOH A 131 635 635 HOH HOH . F 6 HOH A 132 636 636 HOH HOH . F 6 HOH A 133 637 637 HOH HOH . F 6 HOH A 134 638 638 HOH HOH . F 6 HOH A 135 639 639 HOH HOH . F 6 HOH A 136 640 640 HOH HOH . F 6 HOH A 137 641 641 HOH HOH . F 6 HOH A 138 642 642 HOH HOH . F 6 HOH A 139 643 643 HOH HOH . F 6 HOH A 140 644 644 HOH HOH . F 6 HOH A 141 645 645 HOH HOH . F 6 HOH A 142 646 646 HOH HOH . F 6 HOH A 143 647 647 HOH HOH . F 6 HOH A 144 648 648 HOH HOH . F 6 HOH A 145 649 649 HOH HOH . F 6 HOH A 146 650 650 HOH HOH . F 6 HOH A 147 651 651 HOH HOH . F 6 HOH A 148 652 652 HOH HOH . F 6 HOH A 149 653 653 HOH HOH . F 6 HOH A 150 654 654 HOH HOH . F 6 HOH A 151 655 655 HOH HOH . F 6 HOH A 152 656 656 HOH HOH . F 6 HOH A 153 657 657 HOH HOH . F 6 HOH A 154 658 658 HOH HOH . F 6 HOH A 155 659 659 HOH HOH . F 6 HOH A 156 660 660 HOH HOH . F 6 HOH A 157 661 661 HOH HOH . F 6 HOH A 158 662 662 HOH HOH . F 6 HOH A 159 663 663 HOH HOH . F 6 HOH A 160 664 664 HOH HOH . F 6 HOH A 161 665 665 HOH HOH . F 6 HOH A 162 666 666 HOH HOH . F 6 HOH A 163 667 667 HOH HOH . F 6 HOH A 164 668 668 HOH HOH . F 6 HOH A 165 669 669 HOH HOH . F 6 HOH A 166 670 670 HOH HOH . F 6 HOH A 167 671 671 HOH HOH . F 6 HOH A 168 672 672 HOH HOH . F 6 HOH A 169 673 673 HOH HOH . F 6 HOH A 170 674 674 HOH HOH . F 6 HOH A 171 675 675 HOH HOH . F 6 HOH A 172 676 676 HOH HOH . F 6 HOH A 173 677 677 HOH HOH . F 6 HOH A 174 678 678 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 40.901 -23.763 8.127 1 27.85 ? PA FAD 500 A 1 HETATM 2 O O1A FAD . . . B 2 42.18 -24.567 8.279 1 33.08 ? O1A FAD 500 A 1 HETATM 3 O O2A FAD . . . B 2 40.983 -22.488 8.912 1 19.61 ? O2A FAD 500 A 1 HETATM 4 O O5B FAD . . . B 2 39.651 -24.608 8.663 1 32.82 ? O5B FAD 500 A 1 HETATM 5 C C5B FAD . . . B 2 39.426 -25.921 8.231 1 36.55 ? C5B FAD 500 A 1 HETATM 6 C C4B FAD . . . B 2 38.645 -26.595 9.345 1 35.79 ? C4B FAD 500 A 1 HETATM 7 O O4B FAD . . . B 2 38.143 -27.827 8.895 1 22.86 ? O4B FAD 500 A 1 HETATM 8 C C3B FAD . . . B 2 39.522 -26.896 10.545 1 29.93 ? C3B FAD 500 A 1 HETATM 9 O O3B FAD . . . B 2 38.773 -26.562 11.677 1 25.49 ? O3B FAD 500 A 1 HETATM 10 C C2B FAD . . . B 2 39.738 -28.396 10.497 1 31.58 ? C2B FAD 500 A 1 HETATM 11 O O2B FAD . . . B 2 39.876 -28.923 11.797 1 25.8 ? O2B FAD 500 A 1 HETATM 12 C C1B FAD . . . B 2 38.441 -28.825 9.843 1 28.81 ? C1B FAD 500 A 1 HETATM 13 N N9A FAD . . . B 2 38.438 -30.13 9.167 1 24.09 ? N9A FAD 500 A 1 HETATM 14 C C8A FAD . . . B 2 39.303 -30.623 8.229 1 28.95 ? C8A FAD 500 A 1 HETATM 15 N N7A FAD . . . B 2 38.881 -31.859 7.868 1 30.52 ? N7A FAD 500 A 1 HETATM 16 C C5A FAD . . . B 2 37.756 -32.146 8.567 1 25.34 ? C5A FAD 500 A 1 HETATM 17 C C6A FAD . . . B 2 36.928 -33.261 8.595 1 25.22 ? C6A FAD 500 A 1 HETATM 18 N N6A FAD . . . B 2 37.268 -34.372 7.94 1 19.51 ? N6A FAD 500 A 1 HETATM 19 N N1A FAD . . . B 2 35.835 -33.256 9.428 1 25.45 ? N1A FAD 500 A 1 HETATM 20 C C2A FAD . . . B 2 35.577 -32.169 10.234 1 28.77 ? C2A FAD 500 A 1 HETATM 21 N N3A FAD . . . B 2 36.393 -31.064 10.206 1 28.15 ? N3A FAD 500 A 1 HETATM 22 C C4A FAD . . . B 2 37.466 -31.063 9.377 1 24.79 ? C4A FAD 500 A 1 HETATM 23 N N1 FAD . . . B 2 45.597 -15.622 5.758 1 17.62 ? N1 FAD 500 A 1 HETATM 24 C C2 FAD . . . B 2 45.52 -14.253 5.851 1 23.28 ? C2 FAD 500 A 1 HETATM 25 O O2 FAD . . . B 2 44.72 -13.626 5.166 1 30.88 ? O2 FAD 500 A 1 HETATM 26 N N3 FAD . . . B 2 46.474 -13.563 6.567 1 31.03 ? N3 FAD 500 A 1 HETATM 27 C C4 FAD . . . B 2 47.48 -14.222 7.233 1 30.36 ? C4 FAD 500 A 1 HETATM 28 O O4 FAD . . . B 2 48.11 -13.608 8.088 1 36.83 ? O4 FAD 500 A 1 HETATM 29 C C4X FAD . . . B 2 47.407 -15.598 7.336 1 30.08 ? C4X FAD 500 A 1 HETATM 30 N N5 FAD . . . B 2 48.403 -16.263 8.013 1 24.24 ? N5 FAD 500 A 1 HETATM 31 C C5X FAD . . . B 2 48.355 -17.635 8.085 1 26.26 ? C5X FAD 500 A 1 HETATM 32 C C6 FAD . . . B 2 49.285 -18.29 8.892 1 30.28 ? C6 FAD 500 A 1 HETATM 33 C C7 FAD . . . B 2 49.484 -19.656 8.776 1 22.19 ? C7 FAD 500 A 1 HETATM 34 C C7M FAD . . . B 2 50.354 -20.361 9.781 1 25.74 ? C7M FAD 500 A 1 HETATM 35 C C8 FAD . . . B 2 48.621 -20.393 7.97 1 23.9 ? C8 FAD 500 A 1 HETATM 36 C C8M FAD . . . B 2 48.617 -21.891 8.117 1 17.77 ? C8M FAD 500 A 1 HETATM 37 C C9 FAD . . . B 2 47.723 -19.746 7.107 1 18.34 ? C9 FAD 500 A 1 HETATM 38 C C9A FAD . . . B 2 47.561 -18.351 7.19 1 20.98 ? C9A FAD 500 A 1 HETATM 39 N N10 FAD . . . B 2 46.657 -17.663 6.387 1 19.24 ? N10 FAD 500 A 1 HETATM 40 C C10 FAD . . . B 2 46.53 -16.301 6.519 1 23.93 ? C10 FAD 500 A 1 HETATM 41 C C1' FAD . . . B 2 45.903 -18.345 5.276 1 27.49 ? C1' FAD 500 A 1 HETATM 42 C C2' FAD . . . B 2 44.454 -18.724 5.607 1 21.94 ? C2' FAD 500 A 1 HETATM 43 O O2' FAD . . . B 2 43.644 -17.594 5.842 1 26.21 ? O2' FAD 500 A 1 HETATM 44 C C3' FAD . . . B 2 44.31 -19.681 6.79 1 21.76 ? C3' FAD 500 A 1 HETATM 45 O O3' FAD . . . B 2 44.934 -20.908 6.48 1 18.38 ? O3' FAD 500 A 1 HETATM 46 C C4' FAD . . . B 2 42.822 -19.921 7.098 1 26.24 ? C4' FAD 500 A 1 HETATM 47 O O4' FAD . . . B 2 42.68 -20.555 8.348 1 28.39 ? O4' FAD 500 A 1 HETATM 48 C C5' FAD . . . B 2 42.122 -20.745 6.013 1 33.56 ? C5' FAD 500 A 1 HETATM 49 O O5' FAD . . . B 2 40.796 -21.045 6.398 1 37.26 ? O5' FAD 500 A 1 HETATM 50 P P FAD . . . B 2 39.969 -22.313 5.836 1 26.04 ? P FAD 500 A 1 HETATM 51 O O1P FAD . . . B 2 38.533 -22.159 6.254 1 19.44 ? O1P FAD 500 A 1 HETATM 52 O O2P FAD . . . B 2 40.084 -22.475 4.333 1 29.97 ? O2P FAD 500 A 1 HETATM 53 O O3P FAD . . . B 2 40.641 -23.576 6.556 1 29.59 ? O3P FAD 500 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 53 #