data_3T3S
#
_model_server_result.job_id            e3k9mGSSVvJ7K2ZffxKBOg 
_model_server_result.datetime_utc      '2024-10-17 12:27:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3t3s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":1}' 
#
_entry.id    3T3S 
#
_exptl.entry_id    3T3S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              208.257 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3S,4R)-3-ethyl-4-[(1-methyl-1H-imidazol-5-yl)methyl]dihydrofuran-2(3H)-one 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         101.01 
_cell.angle_beta          101.72 
_cell.angle_gamma         93.59 
_cell.entry_id            3T3S 
_cell.length_a            71.501 
_cell.length_b            119.862 
_cell.length_c            154.871 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3T3S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
PISA monomeric 1 author_and_software_defined_assembly 5 
PISA monomeric 1 author_and_software_defined_assembly 6 
PISA monomeric 1 author_and_software_defined_assembly 7 
PISA monomeric 1 author_and_software_defined_assembly 8 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,I,J,W 1 1 
B,K,L,X 2 1 
C,M,N,Y 3 1 
D,O,P,Z 4 1 
E,Q,R,AA 5 1 
F,S,T 6 1 
G,U,BA 7 1 
H,V,CA 8 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 J N N 
? 3 L N N 
? 3 N N N 
? 3 P N N 
? 3 R N N 
? 3 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 J N3 9PL . A 9PL 1 1_555 I FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? 
metalc ? metalc2 A SG CYS 417 A CYS 439 1_555 I FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc3 L N3 9PL . B 9PL 1 1_555 K FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc4 B SG CYS 417 B CYS 439 1_555 K FE HEM . B HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc5 N N3 9PL . C 9PL 1 1_555 M FE HEM . C HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? 
metalc ? metalc6 C SG CYS 417 C CYS 439 1_555 M FE HEM . C HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc7 P N3 9PL . D 9PL 1 1_555 O FE HEM . D HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc8 D SG CYS 417 D CYS 439 1_555 O FE HEM . D HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc9 R N3 9PL . E 9PL 1 1_555 Q FE HEM . E HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc10 E SG CYS 417 E CYS 439 1_555 Q FE HEM . E HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc11 T N3 9PL . F 9PL 1 1_555 S FE HEM . F HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc12 F SG CYS 417 F CYS 439 1_555 S FE HEM . F HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc13 G SG CYS 417 G CYS 439 1_555 U FE HEM . G HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc14 H SG CYS 417 H CYS 439 1_555 V FE HEM . H HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? 
#
_chem_comp.formula           'C11 H16 N2 O2' 
_chem_comp.formula_weight    208.257 
_chem_comp.id                9PL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3S,4R)-3-ethyl-4-[(1-methyl-1H-imidazol-5-yl)methyl]dihydrofuran-2(3H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PILOCARPINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 N1 9PL sing 1 n y 
N1 C2 9PL sing 2 n y 
N1 C6 9PL sing 3 n n 
N3 C2 9PL doub 4 n y 
C2 H2 9PL sing 5 n n 
C4 N3 9PL sing 6 n y 
C4 C5 9PL doub 7 n y 
C4 H4 9PL sing 8 n n 
C7 C5 9PL sing 9 n n 
C6 H6 9PL sing 10 n n 
C6 H6A 9PL sing 11 n n 
C6 H6B 9PL sing 12 n n 
C8 C7 9PL sing 13 n n 
C7 H7 9PL sing 14 n n 
C7 H7A 9PL sing 15 n n 
C12 C8 9PL sing 16 n n 
C9 C8 9PL sing 17 n n 
C8 H8 9PL sing 18 n n 
O10 C9 9PL sing 19 n n 
C9 H9 9PL sing 20 n n 
C9 H9A 9PL sing 21 n n 
C11 O10 9PL sing 22 n n 
O15 C11 9PL doub 23 n n 
C11 C12 9PL sing 24 n n 
C13 C12 9PL sing 25 n n 
C12 H12 9PL sing 26 n n 
C14 C13 9PL sing 27 n n 
C13 H13 9PL sing 28 n n 
C13 H13A 9PL sing 29 n n 
C14 H14 9PL sing 30 n n 
C14 H14A 9PL sing 31 n n 
C14 H14B 9PL sing 32 n n 
#
_atom_sites.entry_id                     3T3S 
_atom_sites.fract_transf_matrix[1][1]    0.013986 
_atom_sites.fract_transf_matrix[1][2]    0.000877 
_atom_sites.fract_transf_matrix[1][3]    0.003154 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008359 
_atom_sites.fract_transf_matrix[2][3]    0.001782 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006743 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 HEM A 1 500 500 HEM HEM . 
J 3 9PL A 1 1 1 9PL 9PL . 
K 2 HEM B 1 500 500 HEM HEM . 
L 3 9PL B 1 1 1 9PL 9PL . 
M 2 HEM C 1 500 500 HEM HEM . 
N 3 9PL C 1 1 1 9PL 9PL . 
O 2 HEM D 1 500 500 HEM HEM . 
P 3 9PL D 1 1 1 9PL 9PL . 
Q 2 HEM E 1 500 500 HEM HEM . 
R 3 9PL E 1 1 1 9PL 9PL . 
S 2 HEM F 1 500 500 HEM HEM . 
T 3 9PL F 1 1 1 9PL 9PL . 
U 2 HEM G 1 500 500 HEM HEM . 
V 2 HEM H 1 500 500 HEM HEM . 
W 4 HOH A 1 2 2 HOH HOH . 
W 4 HOH A 2 3 3 HOH HOH . 
W 4 HOH A 3 7 7 HOH HOH . 
W 4 HOH A 4 10 10 HOH HOH . 
W 4 HOH A 5 20 20 HOH HOH . 
X 4 HOH B 1 4 4 HOH HOH . 
X 4 HOH B 2 11 11 HOH HOH . 
X 4 HOH B 3 19 19 HOH HOH . 
X 4 HOH B 4 499 26 HOH HOH . 
X 4 HOH B 5 501 29 HOH HOH . 
Y 4 HOH C 1 12 12 HOH HOH . 
Y 4 HOH C 2 15 15 HOH HOH . 
Y 4 HOH C 3 22 22 HOH HOH . 
Y 4 HOH C 4 499 31 HOH HOH . 
Z 4 HOH D 1 8 8 HOH HOH . 
Z 4 HOH D 2 13 13 HOH HOH . 
Z 4 HOH D 3 499 27 HOH HOH . 
Z 4 HOH D 4 501 28 HOH HOH . 
Z 4 HOH D 5 502 33 HOH HOH . 
AA 4 HOH E 1 5 5 HOH HOH . 
AA 4 HOH E 2 9 9 HOH HOH . 
AA 4 HOH E 3 17 17 HOH HOH . 
AA 4 HOH E 4 18 18 HOH HOH . 
AA 4 HOH E 5 21 21 HOH HOH . 
AA 4 HOH E 6 499 23 HOH HOH . 
AA 4 HOH E 7 501 24 HOH HOH . 
AA 4 HOH E 8 502 30 HOH HOH . 
BA 4 HOH G 1 1 1 HOH HOH . 
CA 4 HOH H 1 14 14 HOH HOH . 
CA 4 HOH H 2 16 16 HOH HOH . 
CA 4 HOH H 3 499 25 HOH HOH . 
CA 4 HOH H 4 501 32 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 9PL . . . P 3 26.225 -63.451 -61.458 1 63.24 ? N1 9PL 1 D 1 
HETATM 2 C C2 9PL . . . P 3 27.316 -63.901 -60.854 1 63.45 ? C2 9PL 1 D 1 
HETATM 3 N N3 9PL . . . P 3 28.198 -62.894 -60.722 1 65.08 ? N3 9PL 1 D 1 
HETATM 4 C C4 9PL . . . P 3 27.655 -61.791 -61.262 1 64.46 ? C4 9PL 1 D 1 
HETATM 5 C C5 9PL . . . P 3 26.404 -62.145 -61.731 1 64.62 ? C5 9PL 1 D 1 
HETATM 6 C C6 9PL . . . P 3 25.044 -64.304 -61.763 1 63.18 ? C6 9PL 1 D 1 
HETATM 7 C C7 9PL . . . P 3 25.421 -61.179 -62.372 1 66.76 ? C7 9PL 1 D 1 
HETATM 8 C C8 9PL . . . P 3 24.504 -60.771 -61.203 1 68.38 ? C8 9PL 1 D 1 
HETATM 9 C C9 9PL . . . P 3 24.802 -59.47 -60.473 1 67.22 ? C9 9PL 1 D 1 
HETATM 10 O O10 9PL . . . P 3 23.498 -58.941 -60.196 1 69.57 ? O10 9PL 1 D 1 
HETATM 11 C C11 9PL . . . P 3 22.465 -59.691 -60.87 1 69.18 ? C11 9PL 1 D 1 
HETATM 12 C C12 9PL . . . P 3 22.992 -61.012 -61.292 1 69.64 ? C12 9PL 1 D 1 
HETATM 13 C C13 9PL . . . P 3 22.487 -61.444 -62.657 1 71.6 ? C13 9PL 1 D 1 
HETATM 14 C C14 9PL . . . P 3 21.979 -62.874 -62.582 1 71.96 ? C14 9PL 1 D 1 
HETATM 15 O O15 9PL . . . P 3 21.332 -59.286 -61.067 1 69.3 ? O15 9PL 1 D 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    40 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           15 
#