data_3T4D # _model_server_result.job_id 5t92OE30IKN4V7n5GFCHMw _model_server_result.datetime_utc '2025-09-04 13:34:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t4d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":7}' # _entry.id 3T4D # _exptl.entry_id 3T4D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3T4D _cell.length_a 67.439 _cell.length_b 67.439 _cell.length_c 83.562 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T4D _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1,2,3,4 B,G,H,I,J,L 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C K K . A K 1 1_555 A O GLY 48 A GLY 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc2 C K K . A K 1 1_555 A O TYR 49 A TYR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc3 D K K . A K 2 1_555 A O VAL 47 A VAL 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? metalc ? metalc4 D K K . A K 2 1_555 A O GLY 48 A GLY 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc5 E K K . A K 3 1_555 A O THR 46 A THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc6 E K K . A K 3 1_555 A O VAL 47 A VAL 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc7 F K K . A K 4 1_555 A OG1 THR 46 A THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.792 ? metalc ? metalc8 F K K . A K 4 1_555 A O THR 46 A THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? metalc ? metalc9 G K K . B K 5 1_555 B O GLY 48 B GLY 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.037 ? metalc ? metalc10 G K K . B K 5 1_555 B O TYR 49 B TYR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc11 H K K . B K 6 1_555 B O VAL 47 B VAL 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc12 H K K . B K 6 1_555 B O GLY 48 B GLY 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc13 I K K . B K 7 1_555 B O THR 46 B THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc14 I K K . B K 7 1_555 B O VAL 47 B VAL 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc15 J K K . B K 8 1_555 B OG1 THR 46 B THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc16 J K K . B K 8 1_555 B O THR 46 B THR 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3T4D _atom_sites.fract_transf_matrix[1][1] 0.014828 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014828 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K A 1 1 1 K K . D 2 K A 1 2 2 K K . E 2 K A 1 3 3 K K . F 2 K A 1 4 4 K K . G 2 K B 1 5 5 K K . H 2 K B 1 6 6 K K . I 2 K B 1 7 7 K K . J 2 K B 1 8 8 K K . K 3 HOH A 1 5 5 HOH HOH . K 3 HOH A 2 6 6 HOH HOH . K 3 HOH A 3 7 7 HOH HOH . K 3 HOH A 4 8 8 HOH HOH . K 3 HOH A 5 10 10 HOH HOH . K 3 HOH A 6 11 11 HOH HOH . K 3 HOH A 7 12 12 HOH HOH . K 3 HOH A 8 13 13 HOH HOH . K 3 HOH A 9 14 14 HOH HOH . K 3 HOH A 10 15 15 HOH HOH . K 3 HOH A 11 16 16 HOH HOH . K 3 HOH A 12 17 17 HOH HOH . K 3 HOH A 13 115 1 HOH HOH . K 3 HOH A 14 116 2 HOH HOH . K 3 HOH A 15 117 3 HOH HOH . K 3 HOH A 16 118 4 HOH HOH . K 3 HOH A 17 119 18 HOH HOH . K 3 HOH A 18 124 23 HOH HOH . K 3 HOH A 19 126 25 HOH HOH . L 3 HOH B 1 9 9 HOH HOH . L 3 HOH B 2 115 26 HOH HOH . L 3 HOH B 3 116 27 HOH HOH . L 3 HOH B 4 117 28 HOH HOH . L 3 HOH B 5 118 29 HOH HOH . L 3 HOH B 6 119 30 HOH HOH . L 3 HOH B 7 120 31 HOH HOH . L 3 HOH B 8 121 20 HOH HOH . L 3 HOH B 9 122 21 HOH HOH . L 3 HOH B 10 123 22 HOH HOH . L 3 HOH B 11 124 35 HOH HOH . L 3 HOH B 12 125 36 HOH HOH . L 3 HOH B 13 126 37 HOH HOH . L 3 HOH B 14 127 38 HOH HOH . L 3 HOH B 15 128 39 HOH HOH . L 3 HOH B 16 129 40 HOH HOH . L 3 HOH B 17 130 32 HOH HOH . L 3 HOH B 18 131 33 HOH HOH . L 3 HOH B 19 132 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z -15.061 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 15.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 7 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 394 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #