data_3T55 # _model_server_result.job_id 4YwvN8kWcNjubdl_C2uFsQ _model_server_result.datetime_utc '2024-11-08 06:07:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":273}' # _entry.id 3T55 # _exptl.entry_id 3T55 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.243 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(phenoxymethyl)benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3T55 _cell.length_a 45.838 _cell.length_b 53.206 _cell.length_c 87.167 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T55 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H12 O3' _chem_comp.formula_weight 228.243 _chem_comp.id 4RG _chem_comp.mon_nstd_flag . _chem_comp.name '3-(phenoxymethyl)benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAI CAA 4RG doub 1 n n CAB CAA 4RG sing 2 n n CAA OAH 4RG sing 3 n n CAG CAB 4RG doub 4 n y CAB CAC 4RG sing 5 n y CAD CAC 4RG doub 6 n y CAC HAC 4RG sing 7 n n CAE CAD 4RG sing 8 n y CAD CAJ 4RG sing 9 n n CAF CAE 4RG doub 10 n y CAE HAE 4RG sing 11 n n CAF CAG 4RG sing 12 n y CAF HAF 4RG sing 13 n n CAG HAG 4RG sing 14 n n OAH HOAH 4RG sing 15 n n OAK CAJ 4RG sing 16 n n CAJ HAJ 4RG sing 17 n n CAJ HAJA 4RG sing 18 n n CAL OAK 4RG sing 19 n n CAQ CAL 4RG doub 20 n y CAM CAL 4RG sing 21 n y CAN CAM 4RG doub 22 n y CAM HAM 4RG sing 23 n n CAO CAN 4RG sing 24 n y CAN HAN 4RG sing 25 n n CAO CAP 4RG doub 26 n y CAO HAO 4RG sing 27 n n CAP CAQ 4RG sing 28 n y CAP HAP 4RG sing 29 n n CAQ HAQ 4RG sing 30 n n # _atom_sites.entry_id 3T55 _atom_sites.fract_transf_matrix[1][1] 0.021816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4RG A 1 273 1 4RG 4RG . C 3 MLI A 1 274 1 MLI MLI . D 4 SO4 A 1 275 1 SO4 SO4 . E 5 HOH A 1 276 1 HOH HOH . E 5 HOH A 2 277 2 HOH HOH . E 5 HOH A 3 278 3 HOH HOH . E 5 HOH A 4 279 4 HOH HOH . E 5 HOH A 5 280 6 HOH HOH . E 5 HOH A 6 281 7 HOH HOH . E 5 HOH A 7 282 8 HOH HOH . E 5 HOH A 8 283 11 HOH HOH . E 5 HOH A 9 284 12 HOH HOH . E 5 HOH A 10 285 13 HOH HOH . E 5 HOH A 11 286 14 HOH HOH . E 5 HOH A 12 287 15 HOH HOH . E 5 HOH A 13 288 16 HOH HOH . E 5 HOH A 14 289 17 HOH HOH . E 5 HOH A 15 290 18 HOH HOH . E 5 HOH A 16 291 19 HOH HOH . E 5 HOH A 17 292 20 HOH HOH . E 5 HOH A 18 293 22 HOH HOH . E 5 HOH A 19 294 23 HOH HOH . E 5 HOH A 20 295 24 HOH HOH . E 5 HOH A 21 296 25 HOH HOH . E 5 HOH A 22 297 26 HOH HOH . E 5 HOH A 23 298 27 HOH HOH . E 5 HOH A 24 299 28 HOH HOH . E 5 HOH A 25 300 29 HOH HOH . E 5 HOH A 26 301 30 HOH HOH . E 5 HOH A 27 302 31 HOH HOH . E 5 HOH A 28 303 32 HOH HOH . E 5 HOH A 29 304 34 HOH HOH . E 5 HOH A 30 305 36 HOH HOH . E 5 HOH A 31 306 37 HOH HOH . E 5 HOH A 32 307 38 HOH HOH . E 5 HOH A 33 308 39 HOH HOH . E 5 HOH A 34 309 40 HOH HOH . E 5 HOH A 35 310 41 HOH HOH . E 5 HOH A 36 311 42 HOH HOH . E 5 HOH A 37 312 43 HOH HOH . E 5 HOH A 38 313 44 HOH HOH . E 5 HOH A 39 314 45 HOH HOH . E 5 HOH A 40 315 46 HOH HOH . E 5 HOH A 41 316 47 HOH HOH . E 5 HOH A 42 317 48 HOH HOH . E 5 HOH A 43 318 49 HOH HOH . E 5 HOH A 44 319 50 HOH HOH . E 5 HOH A 45 320 51 HOH HOH . E 5 HOH A 46 321 52 HOH HOH . E 5 HOH A 47 322 53 HOH HOH . E 5 HOH A 48 323 54 HOH HOH . E 5 HOH A 49 324 55 HOH HOH . E 5 HOH A 50 325 56 HOH HOH . E 5 HOH A 51 326 57 HOH HOH . E 5 HOH A 52 327 58 HOH HOH . E 5 HOH A 53 328 59 HOH HOH . E 5 HOH A 54 329 60 HOH HOH . E 5 HOH A 55 330 61 HOH HOH . E 5 HOH A 56 331 62 HOH HOH . E 5 HOH A 57 332 63 HOH HOH . E 5 HOH A 58 333 66 HOH HOH . E 5 HOH A 59 334 67 HOH HOH . E 5 HOH A 60 335 68 HOH HOH . E 5 HOH A 61 336 69 HOH HOH . E 5 HOH A 62 337 70 HOH HOH . E 5 HOH A 63 338 71 HOH HOH . E 5 HOH A 64 339 72 HOH HOH . E 5 HOH A 65 340 73 HOH HOH . E 5 HOH A 66 341 74 HOH HOH . E 5 HOH A 67 342 75 HOH HOH . E 5 HOH A 68 343 77 HOH HOH . E 5 HOH A 69 344 79 HOH HOH . E 5 HOH A 70 345 81 HOH HOH . E 5 HOH A 71 346 82 HOH HOH . E 5 HOH A 72 347 83 HOH HOH . E 5 HOH A 73 348 84 HOH HOH . E 5 HOH A 74 349 85 HOH HOH . E 5 HOH A 75 350 86 HOH HOH . E 5 HOH A 76 351 87 HOH HOH . E 5 HOH A 77 352 88 HOH HOH . E 5 HOH A 78 353 90 HOH HOH . E 5 HOH A 79 354 91 HOH HOH . E 5 HOH A 80 355 92 HOH HOH . E 5 HOH A 81 356 93 HOH HOH . E 5 HOH A 82 357 95 HOH HOH . E 5 HOH A 83 358 96 HOH HOH . E 5 HOH A 84 359 97 HOH HOH . E 5 HOH A 85 360 99 HOH HOH . E 5 HOH A 86 361 100 HOH HOH . E 5 HOH A 87 362 101 HOH HOH . E 5 HOH A 88 363 102 HOH HOH . E 5 HOH A 89 364 103 HOH HOH . E 5 HOH A 90 365 104 HOH HOH . E 5 HOH A 91 366 106 HOH HOH . E 5 HOH A 92 367 107 HOH HOH . E 5 HOH A 93 368 109 HOH HOH . E 5 HOH A 94 369 110 HOH HOH . E 5 HOH A 95 370 112 HOH HOH . E 5 HOH A 96 371 114 HOH HOH . E 5 HOH A 97 372 115 HOH HOH . E 5 HOH A 98 373 116 HOH HOH . E 5 HOH A 99 374 118 HOH HOH . E 5 HOH A 100 375 119 HOH HOH . E 5 HOH A 101 376 120 HOH HOH . E 5 HOH A 102 377 122 HOH HOH . E 5 HOH A 103 378 123 HOH HOH . E 5 HOH A 104 379 124 HOH HOH . E 5 HOH A 105 380 126 HOH HOH . E 5 HOH A 106 381 127 HOH HOH . E 5 HOH A 107 382 128 HOH HOH . E 5 HOH A 108 383 130 HOH HOH . E 5 HOH A 109 384 133 HOH HOH . E 5 HOH A 110 385 135 HOH HOH . E 5 HOH A 111 386 137 HOH HOH . E 5 HOH A 112 387 139 HOH HOH . E 5 HOH A 113 388 140 HOH HOH . E 5 HOH A 114 389 141 HOH HOH . E 5 HOH A 115 390 142 HOH HOH . E 5 HOH A 116 391 143 HOH HOH . E 5 HOH A 117 392 146 HOH HOH . E 5 HOH A 118 393 147 HOH HOH . E 5 HOH A 119 394 149 HOH HOH . E 5 HOH A 120 395 154 HOH HOH . E 5 HOH A 121 396 158 HOH HOH . E 5 HOH A 122 397 159 HOH HOH . E 5 HOH A 123 398 160 HOH HOH . E 5 HOH A 124 399 161 HOH HOH . E 5 HOH A 125 400 162 HOH HOH . E 5 HOH A 126 401 163 HOH HOH . E 5 HOH A 127 402 164 HOH HOH . E 5 HOH A 128 403 165 HOH HOH . E 5 HOH A 129 404 166 HOH HOH . E 5 HOH A 130 405 167 HOH HOH . E 5 HOH A 131 406 168 HOH HOH . E 5 HOH A 132 407 169 HOH HOH . E 5 HOH A 133 408 170 HOH HOH . E 5 HOH A 134 409 171 HOH HOH . E 5 HOH A 135 410 172 HOH HOH . E 5 HOH A 136 411 173 HOH HOH . E 5 HOH A 137 412 174 HOH HOH . E 5 HOH A 138 413 175 HOH HOH . E 5 HOH A 139 414 176 HOH HOH . E 5 HOH A 140 415 177 HOH HOH . E 5 HOH A 141 416 178 HOH HOH . E 5 HOH A 142 417 179 HOH HOH . E 5 HOH A 143 418 180 HOH HOH . E 5 HOH A 144 419 181 HOH HOH . E 5 HOH A 145 420 182 HOH HOH . E 5 HOH A 146 421 183 HOH HOH . E 5 HOH A 147 422 184 HOH HOH . E 5 HOH A 148 423 185 HOH HOH . E 5 HOH A 149 424 186 HOH HOH . E 5 HOH A 150 425 187 HOH HOH . E 5 HOH A 151 426 188 HOH HOH . E 5 HOH A 152 427 189 HOH HOH . E 5 HOH A 153 428 190 HOH HOH . E 5 HOH A 154 429 191 HOH HOH . E 5 HOH A 155 430 192 HOH HOH . E 5 HOH A 156 431 193 HOH HOH . E 5 HOH A 157 432 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 4RG . . . B 2 -19.102 2.602 -11.447 1 33.4 ? CAA 4RG 273 A 1 HETATM 2 C CAB 4RG . . . B 2 -17.969 1.632 -11.796 1 30.63 ? CAB 4RG 273 A 1 HETATM 3 C CAC 4RG . . . B 2 -16.822 1.641 -11.013 1 28.75 ? CAC 4RG 273 A 1 HETATM 4 C CAD 4RG . . . B 2 -15.766 0.787 -11.311 1 29.28 ? CAD 4RG 273 A 1 HETATM 5 C CAE 4RG . . . B 2 -15.839 -0.07 -12.398 1 27.39 ? CAE 4RG 273 A 1 HETATM 6 C CAF 4RG . . . B 2 -16.99 -0.101 -13.193 1 28.73 ? CAF 4RG 273 A 1 HETATM 7 C CAG 4RG . . . B 2 -18.048 0.759 -12.887 1 29.48 ? CAG 4RG 273 A 1 HETATM 8 O OAH 4RG . . . B 2 -18.948 3.382 -10.465 1 33.85 ? OAH 4RG 273 A 1 HETATM 9 O OAI 4RG . . . B 2 -20.072 2.654 -12.231 1 38.65 ? OAI 4RG 273 A 1 HETATM 10 C CAJ 4RG . . . B 2 -14.615 0.841 -10.514 1 32.27 ? CAJ 4RG 273 A 1 HETATM 11 O OAK 4RG . . . B 2 -13.365 0.253 -10.976 1 33.48 ? OAK 4RG 273 A 1 HETATM 12 C CAL 4RG . . . B 2 -12.653 0.958 -11.879 1 28.06 ? CAL 4RG 273 A 1 HETATM 13 C CAM 4RG . . . B 2 -12.931 2.273 -12.149 1 26.24 ? CAM 4RG 273 A 1 HETATM 14 C CAN 4RG . . . B 2 -12.17 2.971 -13.054 1 26.58 ? CAN 4RG 273 A 1 HETATM 15 C CAO 4RG . . . B 2 -11.112 2.35 -13.7 1 27.71 ? CAO 4RG 273 A 1 HETATM 16 C CAP 4RG . . . B 2 -10.842 1.014 -13.414 1 25.52 ? CAP 4RG 273 A 1 HETATM 17 C CAQ 4RG . . . B 2 -11.595 0.329 -12.485 1 28 ? CAQ 4RG 273 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #