data_3T55
#
_model_server_result.job_id            gzev1fJdCAXiOmLGNk1TBA 
_model_server_result.datetime_utc      '2024-11-08 05:38:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3t55 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":274}' 
#
_entry.id    3T55 
#
_exptl.entry_id    3T55 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              102.046 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MALONATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3T55 
_cell.length_a            45.838 
_cell.length_b            53.206 
_cell.length_c            87.167 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3T55 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H2 O4 -2' 
_chem_comp.formula_weight    102.046 
_chem_comp.id                MLI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MALONATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MLI sing 267 n n 
C1 C3 MLI sing 268 n n 
C1 H11 MLI sing 269 n n 
C1 H12 MLI sing 270 n n 
C2 O6 MLI doub 271 n n 
C2 O7 MLI sing 272 n n 
C3 O8 MLI doub 273 n n 
C3 O9 MLI sing 274 n n 
#
_atom_sites.entry_id                     3T55 
_atom_sites.fract_transf_matrix[1][1]    0.021816 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018795 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011472 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 4RG A 1 273 1 4RG 4RG . 
C 3 MLI A 1 274 1 MLI MLI . 
D 4 SO4 A 1 275 1 SO4 SO4 . 
E 5 HOH A 1 276 1 HOH HOH . 
E 5 HOH A 2 277 2 HOH HOH . 
E 5 HOH A 3 278 3 HOH HOH . 
E 5 HOH A 4 279 4 HOH HOH . 
E 5 HOH A 5 280 6 HOH HOH . 
E 5 HOH A 6 281 7 HOH HOH . 
E 5 HOH A 7 282 8 HOH HOH . 
E 5 HOH A 8 283 11 HOH HOH . 
E 5 HOH A 9 284 12 HOH HOH . 
E 5 HOH A 10 285 13 HOH HOH . 
E 5 HOH A 11 286 14 HOH HOH . 
E 5 HOH A 12 287 15 HOH HOH . 
E 5 HOH A 13 288 16 HOH HOH . 
E 5 HOH A 14 289 17 HOH HOH . 
E 5 HOH A 15 290 18 HOH HOH . 
E 5 HOH A 16 291 19 HOH HOH . 
E 5 HOH A 17 292 20 HOH HOH . 
E 5 HOH A 18 293 22 HOH HOH . 
E 5 HOH A 19 294 23 HOH HOH . 
E 5 HOH A 20 295 24 HOH HOH . 
E 5 HOH A 21 296 25 HOH HOH . 
E 5 HOH A 22 297 26 HOH HOH . 
E 5 HOH A 23 298 27 HOH HOH . 
E 5 HOH A 24 299 28 HOH HOH . 
E 5 HOH A 25 300 29 HOH HOH . 
E 5 HOH A 26 301 30 HOH HOH . 
E 5 HOH A 27 302 31 HOH HOH . 
E 5 HOH A 28 303 32 HOH HOH . 
E 5 HOH A 29 304 34 HOH HOH . 
E 5 HOH A 30 305 36 HOH HOH . 
E 5 HOH A 31 306 37 HOH HOH . 
E 5 HOH A 32 307 38 HOH HOH . 
E 5 HOH A 33 308 39 HOH HOH . 
E 5 HOH A 34 309 40 HOH HOH . 
E 5 HOH A 35 310 41 HOH HOH . 
E 5 HOH A 36 311 42 HOH HOH . 
E 5 HOH A 37 312 43 HOH HOH . 
E 5 HOH A 38 313 44 HOH HOH . 
E 5 HOH A 39 314 45 HOH HOH . 
E 5 HOH A 40 315 46 HOH HOH . 
E 5 HOH A 41 316 47 HOH HOH . 
E 5 HOH A 42 317 48 HOH HOH . 
E 5 HOH A 43 318 49 HOH HOH . 
E 5 HOH A 44 319 50 HOH HOH . 
E 5 HOH A 45 320 51 HOH HOH . 
E 5 HOH A 46 321 52 HOH HOH . 
E 5 HOH A 47 322 53 HOH HOH . 
E 5 HOH A 48 323 54 HOH HOH . 
E 5 HOH A 49 324 55 HOH HOH . 
E 5 HOH A 50 325 56 HOH HOH . 
E 5 HOH A 51 326 57 HOH HOH . 
E 5 HOH A 52 327 58 HOH HOH . 
E 5 HOH A 53 328 59 HOH HOH . 
E 5 HOH A 54 329 60 HOH HOH . 
E 5 HOH A 55 330 61 HOH HOH . 
E 5 HOH A 56 331 62 HOH HOH . 
E 5 HOH A 57 332 63 HOH HOH . 
E 5 HOH A 58 333 66 HOH HOH . 
E 5 HOH A 59 334 67 HOH HOH . 
E 5 HOH A 60 335 68 HOH HOH . 
E 5 HOH A 61 336 69 HOH HOH . 
E 5 HOH A 62 337 70 HOH HOH . 
E 5 HOH A 63 338 71 HOH HOH . 
E 5 HOH A 64 339 72 HOH HOH . 
E 5 HOH A 65 340 73 HOH HOH . 
E 5 HOH A 66 341 74 HOH HOH . 
E 5 HOH A 67 342 75 HOH HOH . 
E 5 HOH A 68 343 77 HOH HOH . 
E 5 HOH A 69 344 79 HOH HOH . 
E 5 HOH A 70 345 81 HOH HOH . 
E 5 HOH A 71 346 82 HOH HOH . 
E 5 HOH A 72 347 83 HOH HOH . 
E 5 HOH A 73 348 84 HOH HOH . 
E 5 HOH A 74 349 85 HOH HOH . 
E 5 HOH A 75 350 86 HOH HOH . 
E 5 HOH A 76 351 87 HOH HOH . 
E 5 HOH A 77 352 88 HOH HOH . 
E 5 HOH A 78 353 90 HOH HOH . 
E 5 HOH A 79 354 91 HOH HOH . 
E 5 HOH A 80 355 92 HOH HOH . 
E 5 HOH A 81 356 93 HOH HOH . 
E 5 HOH A 82 357 95 HOH HOH . 
E 5 HOH A 83 358 96 HOH HOH . 
E 5 HOH A 84 359 97 HOH HOH . 
E 5 HOH A 85 360 99 HOH HOH . 
E 5 HOH A 86 361 100 HOH HOH . 
E 5 HOH A 87 362 101 HOH HOH . 
E 5 HOH A 88 363 102 HOH HOH . 
E 5 HOH A 89 364 103 HOH HOH . 
E 5 HOH A 90 365 104 HOH HOH . 
E 5 HOH A 91 366 106 HOH HOH . 
E 5 HOH A 92 367 107 HOH HOH . 
E 5 HOH A 93 368 109 HOH HOH . 
E 5 HOH A 94 369 110 HOH HOH . 
E 5 HOH A 95 370 112 HOH HOH . 
E 5 HOH A 96 371 114 HOH HOH . 
E 5 HOH A 97 372 115 HOH HOH . 
E 5 HOH A 98 373 116 HOH HOH . 
E 5 HOH A 99 374 118 HOH HOH . 
E 5 HOH A 100 375 119 HOH HOH . 
E 5 HOH A 101 376 120 HOH HOH . 
E 5 HOH A 102 377 122 HOH HOH . 
E 5 HOH A 103 378 123 HOH HOH . 
E 5 HOH A 104 379 124 HOH HOH . 
E 5 HOH A 105 380 126 HOH HOH . 
E 5 HOH A 106 381 127 HOH HOH . 
E 5 HOH A 107 382 128 HOH HOH . 
E 5 HOH A 108 383 130 HOH HOH . 
E 5 HOH A 109 384 133 HOH HOH . 
E 5 HOH A 110 385 135 HOH HOH . 
E 5 HOH A 111 386 137 HOH HOH . 
E 5 HOH A 112 387 139 HOH HOH . 
E 5 HOH A 113 388 140 HOH HOH . 
E 5 HOH A 114 389 141 HOH HOH . 
E 5 HOH A 115 390 142 HOH HOH . 
E 5 HOH A 116 391 143 HOH HOH . 
E 5 HOH A 117 392 146 HOH HOH . 
E 5 HOH A 118 393 147 HOH HOH . 
E 5 HOH A 119 394 149 HOH HOH . 
E 5 HOH A 120 395 154 HOH HOH . 
E 5 HOH A 121 396 158 HOH HOH . 
E 5 HOH A 122 397 159 HOH HOH . 
E 5 HOH A 123 398 160 HOH HOH . 
E 5 HOH A 124 399 161 HOH HOH . 
E 5 HOH A 125 400 162 HOH HOH . 
E 5 HOH A 126 401 163 HOH HOH . 
E 5 HOH A 127 402 164 HOH HOH . 
E 5 HOH A 128 403 165 HOH HOH . 
E 5 HOH A 129 404 166 HOH HOH . 
E 5 HOH A 130 405 167 HOH HOH . 
E 5 HOH A 131 406 168 HOH HOH . 
E 5 HOH A 132 407 169 HOH HOH . 
E 5 HOH A 133 408 170 HOH HOH . 
E 5 HOH A 134 409 171 HOH HOH . 
E 5 HOH A 135 410 172 HOH HOH . 
E 5 HOH A 136 411 173 HOH HOH . 
E 5 HOH A 137 412 174 HOH HOH . 
E 5 HOH A 138 413 175 HOH HOH . 
E 5 HOH A 139 414 176 HOH HOH . 
E 5 HOH A 140 415 177 HOH HOH . 
E 5 HOH A 141 416 178 HOH HOH . 
E 5 HOH A 142 417 179 HOH HOH . 
E 5 HOH A 143 418 180 HOH HOH . 
E 5 HOH A 144 419 181 HOH HOH . 
E 5 HOH A 145 420 182 HOH HOH . 
E 5 HOH A 146 421 183 HOH HOH . 
E 5 HOH A 147 422 184 HOH HOH . 
E 5 HOH A 148 423 185 HOH HOH . 
E 5 HOH A 149 424 186 HOH HOH . 
E 5 HOH A 150 425 187 HOH HOH . 
E 5 HOH A 151 426 188 HOH HOH . 
E 5 HOH A 152 427 189 HOH HOH . 
E 5 HOH A 153 428 190 HOH HOH . 
E 5 HOH A 154 429 191 HOH HOH . 
E 5 HOH A 155 430 192 HOH HOH . 
E 5 HOH A 156 431 193 HOH HOH . 
E 5 HOH A 157 432 194 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MLI . . . C 3 -14.484 4.259 -5.343 1 26.62 ? C1 MLI 274 A 1 
HETATM 2 C C2 MLI . . . C 3 -15.152 5.561 -4.893 1 23.47 ? C2 MLI 274 A 1 
HETATM 3 C C3 MLI . . . C 3 -15.401 3.473 -6.237 1 32.82 ? C3 MLI 274 A 1 
HETATM 4 O O6 MLI . . . C 3 -15.483 6.36 -5.807 1 18.91 ? O6 MLI 274 A 1 
HETATM 5 O O7 MLI . . . C 3 -15.217 5.785 -3.644 1 19.08 ? O7 MLI 274 A 1 
HETATM 6 O O8 MLI . . . C 3 -14.849 2.757 -7.132 1 37.42 ? O8 MLI 274 A 1 
HETATM 7 O O9 MLI . . . C 3 -16.629 3.544 -5.979 1 34.33 ? O9 MLI 274 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#