data_3T5E # _model_server_result.job_id X_OKIJXfNrLKkPoVilL0tA _model_server_result.datetime_utc '2024-11-23 12:31:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t5e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":24}' # _entry.id 3T5E # _exptl.entry_id 3T5E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3T5E _cell.length_a 63.034 _cell.length_b 63.034 _cell.length_c 42.389 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O6 DG 2 A DG 2 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc2 A O6 DG 2 A DG 2 1_555 E K K . A K 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc3 A O6 DG 3 A DG 3 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.971 ? metalc ? metalc4 A O6 DG 3 A DG 3 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc5 A O6 DG 4 A DG 4 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc6 A O6 DG 8 A DG 8 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc7 A O6 DG 8 A DG 8 1_555 E K K . A K 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc8 A O6 DG 9 A DG 9 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc9 A O6 DG 9 A DG 9 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc10 A O6 DG 10 A DG 10 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc11 A O6 DG 14 A DG 14 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc12 A O6 DG 14 A DG 14 1_555 E K K . A K 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc13 A O6 DG 15 A DG 15 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc14 A O6 DG 15 A DG 15 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc15 A O6 DG 16 A DG 16 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc16 A O6 DG 20 A DG 20 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc17 A O6 DG 20 A DG 20 1_555 E K K . A K 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc18 A O6 DG 21 A DG 21 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc19 A O6 DG 21 A DG 21 1_555 D K K . A K 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc20 A O6 DG 22 A DG 22 1_555 C K K . A K 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? hydrog TYPE_6_PAIR hydrog1 A N1 DG 2 A DG 2 1_555 A O6 DG 8 A DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog2 A N2 DG 2 A DG 2 1_555 A N7 DG 8 A DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog3 A N7 DG 2 A DG 2 1_555 A N2 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog4 A O6 DG 2 A DG 2 1_555 A N1 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog5 A N1 DG 3 A DG 3 1_555 A O6 DG 9 A DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog6 A N2 DG 3 A DG 3 1_555 A N7 DG 9 A DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog7 A N7 DG 3 A DG 3 1_555 A N2 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog8 A O6 DG 3 A DG 3 1_555 A N1 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog9 A N1 DG 4 A DG 4 1_555 A O6 DG 10 A DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog10 A N2 DG 4 A DG 4 1_555 A N7 DG 10 A DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog11 A N7 DG 4 A DG 4 1_555 A N2 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog12 A O6 DG 4 A DG 4 1_555 A N1 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog13 A N1 DG 8 A DG 8 1_555 A O6 DG 14 A DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog14 A N2 DG 8 A DG 8 1_555 A N7 DG 14 A DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog15 A N1 DG 9 A DG 9 1_555 A O6 DG 15 A DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog16 A N2 DG 9 A DG 9 1_555 A N7 DG 15 A DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog17 A N1 DG 10 A DG 10 1_555 A O6 DG 16 A DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog18 A N2 DG 10 A DG 10 1_555 A N7 DG 16 A DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog19 A N1 DG 14 A DG 14 1_555 A O6 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog20 A N2 DG 14 A DG 14 1_555 A N7 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog21 A N1 DG 15 A DG 15 1_555 A O6 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog22 A N2 DG 15 A DG 15 1_555 A N7 DG 21 A DG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog23 A N1 DG 16 A DG 16 1_555 A O6 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog24 A N2 DG 16 A DG 16 1_555 A N7 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3T5E _atom_sites.fract_transf_matrix[1][1] 0.015864 _atom_sites.fract_transf_matrix[1][2] 0.009159 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T5E A 1 23 1 T5E T5E . C 3 K A 1 24 24 K K . D 3 K A 1 25 25 K K . E 3 K A 1 26 26 K K . F 4 HOH A 1 27 27 HOH HOH . F 4 HOH A 2 28 28 HOH HOH . F 4 HOH A 3 29 29 HOH HOH . F 4 HOH A 4 30 30 HOH HOH . F 4 HOH A 5 31 31 HOH HOH . F 4 HOH A 6 32 32 HOH HOH . F 4 HOH A 7 33 1 HOH HOH . F 4 HOH A 8 34 34 HOH HOH . F 4 HOH A 9 35 2 HOH HOH . F 4 HOH A 10 36 36 HOH HOH . F 4 HOH A 11 37 37 HOH HOH . F 4 HOH A 12 38 38 HOH HOH . F 4 HOH A 13 39 4 HOH HOH . F 4 HOH A 14 40 6 HOH HOH . F 4 HOH A 15 41 7 HOH HOH . F 4 HOH A 16 42 42 HOH HOH . F 4 HOH A 17 43 43 HOH HOH . F 4 HOH A 18 44 44 HOH HOH . F 4 HOH A 19 45 45 HOH HOH . F 4 HOH A 20 46 46 HOH HOH . F 4 HOH A 21 47 8 HOH HOH . F 4 HOH A 22 48 9 HOH HOH . F 4 HOH A 23 49 10 HOH HOH . F 4 HOH A 24 50 11 HOH HOH . F 4 HOH A 25 51 12 HOH HOH . F 4 HOH A 26 52 13 HOH HOH . F 4 HOH A 27 53 14 HOH HOH . F 4 HOH A 28 54 15 HOH HOH . F 4 HOH A 29 55 16 HOH HOH . F 4 HOH A 30 56 17 HOH HOH . F 4 HOH A 31 57 18 HOH HOH . F 4 HOH A 32 58 19 HOH HOH . F 4 HOH A 33 59 20 HOH HOH . F 4 HOH A 34 60 21 HOH HOH . F 4 HOH A 35 61 22 HOH HOH . F 4 HOH A 36 62 23 HOH HOH . F 4 HOH A 37 63 24 HOH HOH . F 4 HOH A 38 64 25 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -26.526 _atom_site.Cartn_y 4.705 _atom_site.Cartn_z -9.648 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 24 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #