data_3T5Y # _model_server_result.job_id OnY2q99ywjdhCQchslJt5A _model_server_result.datetime_utc '2025-02-27 02:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t5y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":359}' # _entry.id 3T5Y # _exptl.entry_id 3T5Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3T5Y _cell.length_a 106.04 _cell.length_b 106.04 _cell.length_c 121.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 115 B ARG 115 1_555 B N MCS 116 B MCS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 B N ASN 117 B ASN 117 1_555 B C MCS 116 B MCS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3T5Y _atom_sites.fract_transf_matrix[1][1] 0.00943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT A 1 358 343 ACT ACT . D 3 ACT A 1 359 344 ACT ACT . E 3 ACT B 1 358 343 ACT ACT . F 4 HOH A 1 360 1 HOH HOH . F 4 HOH A 2 361 2 HOH HOH . F 4 HOH A 3 362 3 HOH HOH . F 4 HOH A 4 363 4 HOH HOH . F 4 HOH A 5 364 5 HOH HOH . F 4 HOH A 6 365 6 HOH HOH . F 4 HOH A 7 366 8 HOH HOH . F 4 HOH A 8 367 9 HOH HOH . F 4 HOH A 9 368 10 HOH HOH . F 4 HOH A 10 369 11 HOH HOH . F 4 HOH A 11 370 12 HOH HOH . F 4 HOH A 12 371 13 HOH HOH . F 4 HOH A 13 372 14 HOH HOH . F 4 HOH A 14 373 15 HOH HOH . F 4 HOH A 15 374 16 HOH HOH . F 4 HOH A 16 375 17 HOH HOH . F 4 HOH A 17 376 18 HOH HOH . F 4 HOH A 18 377 19 HOH HOH . F 4 HOH A 19 378 20 HOH HOH . F 4 HOH A 20 379 21 HOH HOH . F 4 HOH A 21 380 23 HOH HOH . F 4 HOH A 22 381 24 HOH HOH . F 4 HOH A 23 382 25 HOH HOH . F 4 HOH A 24 383 27 HOH HOH . F 4 HOH A 25 384 28 HOH HOH . F 4 HOH A 26 385 30 HOH HOH . F 4 HOH A 27 386 31 HOH HOH . F 4 HOH A 28 387 32 HOH HOH . F 4 HOH A 29 388 33 HOH HOH . F 4 HOH A 30 389 34 HOH HOH . F 4 HOH A 31 390 38 HOH HOH . F 4 HOH A 32 391 39 HOH HOH . F 4 HOH A 33 392 40 HOH HOH . F 4 HOH A 34 393 41 HOH HOH . F 4 HOH A 35 394 43 HOH HOH . F 4 HOH A 36 395 45 HOH HOH . F 4 HOH A 37 396 51 HOH HOH . F 4 HOH A 38 397 59 HOH HOH . F 4 HOH A 39 398 60 HOH HOH . F 4 HOH A 40 399 61 HOH HOH . F 4 HOH A 41 400 62 HOH HOH . F 4 HOH A 42 401 63 HOH HOH . F 4 HOH A 43 402 67 HOH HOH . F 4 HOH A 44 403 68 HOH HOH . F 4 HOH A 45 404 71 HOH HOH . F 4 HOH A 46 405 72 HOH HOH . F 4 HOH A 47 406 74 HOH HOH . F 4 HOH A 48 407 75 HOH HOH . F 4 HOH A 49 408 76 HOH HOH . F 4 HOH A 50 409 78 HOH HOH . F 4 HOH A 51 410 79 HOH HOH . F 4 HOH A 52 411 81 HOH HOH . F 4 HOH A 53 412 83 HOH HOH . F 4 HOH A 54 413 84 HOH HOH . F 4 HOH A 55 414 85 HOH HOH . F 4 HOH A 56 415 86 HOH HOH . F 4 HOH A 57 416 87 HOH HOH . F 4 HOH A 58 417 88 HOH HOH . F 4 HOH A 59 418 89 HOH HOH . F 4 HOH A 60 419 93 HOH HOH . F 4 HOH A 61 420 94 HOH HOH . F 4 HOH A 62 421 95 HOH HOH . F 4 HOH A 63 422 96 HOH HOH . F 4 HOH A 64 423 98 HOH HOH . F 4 HOH A 65 424 99 HOH HOH . F 4 HOH A 66 425 100 HOH HOH . F 4 HOH A 67 426 101 HOH HOH . F 4 HOH A 68 427 102 HOH HOH . F 4 HOH A 69 428 104 HOH HOH . F 4 HOH A 70 429 105 HOH HOH . F 4 HOH A 71 430 108 HOH HOH . F 4 HOH A 72 431 109 HOH HOH . F 4 HOH A 73 432 112 HOH HOH . F 4 HOH A 74 433 113 HOH HOH . F 4 HOH A 75 434 114 HOH HOH . F 4 HOH A 76 435 115 HOH HOH . F 4 HOH A 77 436 117 HOH HOH . F 4 HOH A 78 437 118 HOH HOH . F 4 HOH A 79 438 119 HOH HOH . F 4 HOH A 80 439 121 HOH HOH . F 4 HOH A 81 440 123 HOH HOH . F 4 HOH A 82 441 125 HOH HOH . F 4 HOH A 83 442 133 HOH HOH . F 4 HOH A 84 443 135 HOH HOH . F 4 HOH A 85 444 136 HOH HOH . F 4 HOH A 86 445 137 HOH HOH . F 4 HOH A 87 446 138 HOH HOH . F 4 HOH A 88 447 139 HOH HOH . F 4 HOH A 89 448 141 HOH HOH . F 4 HOH A 90 449 144 HOH HOH . F 4 HOH A 91 450 146 HOH HOH . F 4 HOH A 92 451 149 HOH HOH . F 4 HOH A 93 452 150 HOH HOH . F 4 HOH A 94 453 151 HOH HOH . F 4 HOH A 95 454 152 HOH HOH . F 4 HOH A 96 455 153 HOH HOH . F 4 HOH A 97 456 155 HOH HOH . F 4 HOH A 98 457 156 HOH HOH . F 4 HOH A 99 458 160 HOH HOH . F 4 HOH A 100 459 162 HOH HOH . F 4 HOH A 101 460 163 HOH HOH . F 4 HOH A 102 461 166 HOH HOH . F 4 HOH A 103 462 167 HOH HOH . F 4 HOH A 104 463 168 HOH HOH . F 4 HOH A 105 464 172 HOH HOH . F 4 HOH A 106 465 173 HOH HOH . F 4 HOH A 107 466 178 HOH HOH . F 4 HOH A 108 467 180 HOH HOH . F 4 HOH A 109 468 181 HOH HOH . F 4 HOH A 110 469 183 HOH HOH . F 4 HOH A 111 470 186 HOH HOH . F 4 HOH A 112 471 187 HOH HOH . F 4 HOH A 113 472 188 HOH HOH . F 4 HOH A 114 473 189 HOH HOH . F 4 HOH A 115 474 190 HOH HOH . F 4 HOH A 116 475 192 HOH HOH . F 4 HOH A 117 476 193 HOH HOH . F 4 HOH A 118 477 196 HOH HOH . F 4 HOH A 119 478 199 HOH HOH . F 4 HOH A 120 479 200 HOH HOH . F 4 HOH A 121 480 201 HOH HOH . F 4 HOH A 122 481 202 HOH HOH . F 4 HOH A 123 482 204 HOH HOH . F 4 HOH A 124 483 205 HOH HOH . F 4 HOH A 125 484 208 HOH HOH . F 4 HOH A 126 485 210 HOH HOH . F 4 HOH A 127 486 217 HOH HOH . F 4 HOH A 128 487 218 HOH HOH . F 4 HOH A 129 488 219 HOH HOH . F 4 HOH A 130 489 220 HOH HOH . F 4 HOH A 131 490 222 HOH HOH . F 4 HOH A 132 491 223 HOH HOH . F 4 HOH A 133 492 224 HOH HOH . F 4 HOH A 134 493 228 HOH HOH . F 4 HOH A 135 494 229 HOH HOH . F 4 HOH A 136 495 230 HOH HOH . F 4 HOH A 137 496 231 HOH HOH . F 4 HOH A 138 497 232 HOH HOH . F 4 HOH A 139 498 233 HOH HOH . F 4 HOH A 140 499 234 HOH HOH . F 4 HOH A 141 500 238 HOH HOH . F 4 HOH A 142 501 241 HOH HOH . F 4 HOH A 143 502 242 HOH HOH . F 4 HOH A 144 503 245 HOH HOH . F 4 HOH A 145 504 246 HOH HOH . F 4 HOH A 146 505 250 HOH HOH . F 4 HOH A 147 506 251 HOH HOH . F 4 HOH A 148 507 252 HOH HOH . F 4 HOH A 149 508 253 HOH HOH . F 4 HOH A 150 509 255 HOH HOH . F 4 HOH A 151 510 256 HOH HOH . F 4 HOH A 152 511 257 HOH HOH . F 4 HOH A 153 512 258 HOH HOH . F 4 HOH A 154 513 259 HOH HOH . F 4 HOH A 155 514 260 HOH HOH . F 4 HOH A 156 515 261 HOH HOH . F 4 HOH A 157 516 262 HOH HOH . F 4 HOH A 158 517 263 HOH HOH . F 4 HOH A 159 518 267 HOH HOH . F 4 HOH A 160 519 269 HOH HOH . F 4 HOH A 161 520 270 HOH HOH . F 4 HOH A 162 521 271 HOH HOH . F 4 HOH A 163 522 275 HOH HOH . F 4 HOH A 164 523 276 HOH HOH . F 4 HOH A 165 524 277 HOH HOH . F 4 HOH A 166 525 278 HOH HOH . F 4 HOH A 167 526 279 HOH HOH . F 4 HOH A 168 527 281 HOH HOH . F 4 HOH A 169 528 282 HOH HOH . F 4 HOH A 170 529 283 HOH HOH . F 4 HOH A 171 530 284 HOH HOH . F 4 HOH A 172 531 285 HOH HOH . F 4 HOH A 173 532 286 HOH HOH . F 4 HOH A 174 533 287 HOH HOH . F 4 HOH A 175 534 288 HOH HOH . F 4 HOH A 176 535 289 HOH HOH . F 4 HOH A 177 536 290 HOH HOH . F 4 HOH A 178 537 291 HOH HOH . F 4 HOH A 179 538 292 HOH HOH . F 4 HOH A 180 539 293 HOH HOH . F 4 HOH A 181 540 295 HOH HOH . G 4 HOH B 1 359 7 HOH HOH . G 4 HOH B 2 360 22 HOH HOH . G 4 HOH B 3 361 26 HOH HOH . G 4 HOH B 4 362 29 HOH HOH . G 4 HOH B 5 363 35 HOH HOH . G 4 HOH B 6 364 36 HOH HOH . G 4 HOH B 7 365 37 HOH HOH . G 4 HOH B 8 366 42 HOH HOH . G 4 HOH B 9 367 44 HOH HOH . G 4 HOH B 10 368 46 HOH HOH . G 4 HOH B 11 369 47 HOH HOH . G 4 HOH B 12 370 48 HOH HOH . G 4 HOH B 13 371 49 HOH HOH . G 4 HOH B 14 372 50 HOH HOH . G 4 HOH B 15 373 52 HOH HOH . G 4 HOH B 16 374 53 HOH HOH . G 4 HOH B 17 375 54 HOH HOH . G 4 HOH B 18 376 55 HOH HOH . G 4 HOH B 19 377 56 HOH HOH . G 4 HOH B 20 378 57 HOH HOH . G 4 HOH B 21 379 58 HOH HOH . G 4 HOH B 22 380 64 HOH HOH . G 4 HOH B 23 381 65 HOH HOH . G 4 HOH B 24 382 66 HOH HOH . G 4 HOH B 25 383 69 HOH HOH . G 4 HOH B 26 384 70 HOH HOH . G 4 HOH B 27 385 73 HOH HOH . G 4 HOH B 28 386 77 HOH HOH . G 4 HOH B 29 387 80 HOH HOH . G 4 HOH B 30 388 82 HOH HOH . G 4 HOH B 31 389 90 HOH HOH . G 4 HOH B 32 390 91 HOH HOH . G 4 HOH B 33 391 92 HOH HOH . G 4 HOH B 34 392 97 HOH HOH . G 4 HOH B 35 393 103 HOH HOH . G 4 HOH B 36 394 106 HOH HOH . G 4 HOH B 37 395 107 HOH HOH . G 4 HOH B 38 396 110 HOH HOH . G 4 HOH B 39 397 111 HOH HOH . G 4 HOH B 40 398 116 HOH HOH . G 4 HOH B 41 399 120 HOH HOH . G 4 HOH B 42 400 122 HOH HOH . G 4 HOH B 43 401 124 HOH HOH . G 4 HOH B 44 402 126 HOH HOH . G 4 HOH B 45 403 127 HOH HOH . G 4 HOH B 46 404 128 HOH HOH . G 4 HOH B 47 405 129 HOH HOH . G 4 HOH B 48 406 130 HOH HOH . G 4 HOH B 49 407 131 HOH HOH . G 4 HOH B 50 408 132 HOH HOH . G 4 HOH B 51 409 134 HOH HOH . G 4 HOH B 52 410 140 HOH HOH . G 4 HOH B 53 411 142 HOH HOH . G 4 HOH B 54 412 143 HOH HOH . G 4 HOH B 55 413 145 HOH HOH . G 4 HOH B 56 414 147 HOH HOH . G 4 HOH B 57 415 148 HOH HOH . G 4 HOH B 58 416 154 HOH HOH . G 4 HOH B 59 417 157 HOH HOH . G 4 HOH B 60 418 158 HOH HOH . G 4 HOH B 61 419 159 HOH HOH . G 4 HOH B 62 420 161 HOH HOH . G 4 HOH B 63 421 164 HOH HOH . G 4 HOH B 64 422 165 HOH HOH . G 4 HOH B 65 423 169 HOH HOH . G 4 HOH B 66 424 170 HOH HOH . G 4 HOH B 67 425 171 HOH HOH . G 4 HOH B 68 426 174 HOH HOH . G 4 HOH B 69 427 175 HOH HOH . G 4 HOH B 70 428 176 HOH HOH . G 4 HOH B 71 429 177 HOH HOH . G 4 HOH B 72 430 179 HOH HOH . G 4 HOH B 73 431 182 HOH HOH . G 4 HOH B 74 432 184 HOH HOH . G 4 HOH B 75 433 185 HOH HOH . G 4 HOH B 76 434 191 HOH HOH . G 4 HOH B 77 435 194 HOH HOH . G 4 HOH B 78 436 195 HOH HOH . G 4 HOH B 79 437 197 HOH HOH . G 4 HOH B 80 438 198 HOH HOH . G 4 HOH B 81 439 203 HOH HOH . G 4 HOH B 82 440 206 HOH HOH . G 4 HOH B 83 441 207 HOH HOH . G 4 HOH B 84 442 209 HOH HOH . G 4 HOH B 85 443 211 HOH HOH . G 4 HOH B 86 444 212 HOH HOH . G 4 HOH B 87 445 213 HOH HOH . G 4 HOH B 88 446 214 HOH HOH . G 4 HOH B 89 447 215 HOH HOH . G 4 HOH B 90 448 216 HOH HOH . G 4 HOH B 91 449 221 HOH HOH . G 4 HOH B 92 450 225 HOH HOH . G 4 HOH B 93 451 227 HOH HOH . G 4 HOH B 94 452 235 HOH HOH . G 4 HOH B 95 453 236 HOH HOH . G 4 HOH B 96 454 237 HOH HOH . G 4 HOH B 97 455 239 HOH HOH . G 4 HOH B 98 456 240 HOH HOH . G 4 HOH B 99 457 243 HOH HOH . G 4 HOH B 100 458 244 HOH HOH . G 4 HOH B 101 459 247 HOH HOH . G 4 HOH B 102 460 248 HOH HOH . G 4 HOH B 103 461 249 HOH HOH . G 4 HOH B 104 462 254 HOH HOH . G 4 HOH B 105 463 264 HOH HOH . G 4 HOH B 106 464 265 HOH HOH . G 4 HOH B 107 465 266 HOH HOH . G 4 HOH B 108 466 268 HOH HOH . G 4 HOH B 109 467 272 HOH HOH . G 4 HOH B 110 468 274 HOH HOH . G 4 HOH B 111 469 280 HOH HOH . G 4 HOH B 112 470 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 3 33.295 9.636 -7.094 0.5 40.18 ? C ACT 359 A 1 HETATM 2 O O ACT . . . D 3 32.623 8.589 -7.111 0.5 37.26 ? O ACT 359 A 1 HETATM 3 O OXT ACT . . . D 3 32.632 10.611 -6.733 0.5 45.85 ? OXT ACT 359 A 1 HETATM 4 C CH3 ACT . . . D 3 34.757 9.722 -7.448 0.5 34.1 ? CH3 ACT 359 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #