data_3T7B # _model_server_result.job_id ou9t-10YI0_qAcDE-Lkevw _model_server_result.datetime_utc '2025-01-16 15:27:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":259}' # _entry.id 3T7B # _exptl.entry_id 3T7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S,R MESO-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3T7B _cell.length_a 126.456 _cell.length_b 134.688 _cell.length_c 98.02 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 134.688 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 48 B CYS 45 1_555 B SG CYS 48 B CYS 45 4_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N ASN 5 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C ILE 42 A ILE 39 1_555 A N MSE 43 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 43 A MSE 40 1_555 A N HIS 44 A HIS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C LEU 53 A LEU 50 1_555 A N MSE 54 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C MSE 54 A MSE 51 1_555 A N LYS 55 A LYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A C TYR 143 A TYR 140 1_555 A N MSE 144 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 A C MSE 144 A MSE 141 1_555 A N PRO 145 A PRO 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale9 A C LEU 158 A LEU 155 1_555 A N MSE 159 A MSE 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale10 A C MSE 159 A MSE 156 1_555 A N ASN 160 A ASN 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C GLU 197 A GLU 194 1_555 A N MSE 198 A MSE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale12 A C MSE 198 A MSE 195 1_555 A N THR 199 A THR 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale13 A C GLY 215 A GLY 212 1_555 A N MSE 216 A MSE 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale14 A C MSE 216 A MSE 213 1_555 A N VAL 217 A VAL 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale15 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale16 B C MSE 4 B MSE 1 1_555 B N ASN 5 B ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale17 B C ILE 42 B ILE 39 1_555 B N MSE 43 B MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale18 B C MSE 43 B MSE 40 1_555 B N HIS 44 B HIS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale19 B C LEU 53 B LEU 50 1_555 B N MSE 54 B MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale20 B C MSE 54 B MSE 51 1_555 B N LYS 55 B LYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale21 B C TYR 143 B TYR 140 1_555 B N MSE 144 B MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale22 B C MSE 144 B MSE 141 1_555 B N PRO 145 B PRO 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale23 B C LEU 158 B LEU 155 1_555 B N MSE 159 B MSE 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale24 B C MSE 159 B MSE 156 1_555 B N ASN 160 B ASN 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale25 B C GLU 197 B GLU 194 1_555 B N MSE 198 B MSE 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale26 B C MSE 198 B MSE 195 1_555 B N THR 199 B THR 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale27 B C GLY 215 B GLY 212 1_555 B N MSE 216 B MSE 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale28 B C MSE 216 B MSE 213 1_555 B N VAL 217 B VAL 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id SRT _chem_comp.mon_nstd_flag . _chem_comp.name 'S,R MESO-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 SRT sing 290 n n O1 H1 SRT sing 291 n n O11 C1 SRT doub 292 n n C1 C2 SRT sing 293 n n C2 O2 SRT sing 294 n n C2 C3 SRT sing 295 n n C2 H2 SRT sing 296 n n O2 HA SRT sing 297 n n C3 O3 SRT sing 298 n n C3 C4 SRT sing 299 n n C3 H3 SRT sing 300 n n O3 HB SRT sing 301 n n C4 O4 SRT doub 302 n n C4 O41 SRT sing 303 n n O41 H41 SRT sing 304 n n # _atom_sites.entry_id 3T7B _atom_sites.fract_transf_matrix[1][1] 0.007908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010202 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GLU A 1 258 258 GLU GLU . D 2 GLU B 1 258 258 GLU GLU . E 3 SRT B 1 259 259 SRT SRT . F 4 HOH A 1 259 259 HOH HOH . F 4 HOH A 2 260 260 HOH HOH . F 4 HOH A 3 261 261 HOH HOH . F 4 HOH A 4 262 262 HOH HOH . F 4 HOH A 5 263 263 HOH HOH . F 4 HOH A 6 264 264 HOH HOH . F 4 HOH A 7 265 265 HOH HOH . F 4 HOH A 8 266 266 HOH HOH . F 4 HOH A 9 267 267 HOH HOH . F 4 HOH A 10 268 268 HOH HOH . F 4 HOH A 11 269 269 HOH HOH . F 4 HOH A 12 270 270 HOH HOH . F 4 HOH A 13 271 271 HOH HOH . F 4 HOH A 14 272 272 HOH HOH . F 4 HOH A 15 273 273 HOH HOH . F 4 HOH A 16 274 274 HOH HOH . F 4 HOH A 17 275 275 HOH HOH . F 4 HOH A 18 276 276 HOH HOH . F 4 HOH A 19 277 277 HOH HOH . F 4 HOH A 20 278 278 HOH HOH . F 4 HOH A 21 279 279 HOH HOH . F 4 HOH A 22 280 280 HOH HOH . F 4 HOH A 23 281 281 HOH HOH . F 4 HOH A 24 282 282 HOH HOH . F 4 HOH A 25 283 283 HOH HOH . F 4 HOH A 26 284 284 HOH HOH . F 4 HOH A 27 285 285 HOH HOH . F 4 HOH A 28 286 286 HOH HOH . F 4 HOH A 29 287 287 HOH HOH . F 4 HOH A 30 288 288 HOH HOH . F 4 HOH A 31 289 289 HOH HOH . F 4 HOH A 32 290 290 HOH HOH . F 4 HOH A 33 291 291 HOH HOH . F 4 HOH A 34 292 292 HOH HOH . F 4 HOH A 35 293 293 HOH HOH . F 4 HOH A 36 294 294 HOH HOH . G 4 HOH B 1 260 260 HOH HOH . G 4 HOH B 2 261 261 HOH HOH . G 4 HOH B 3 262 262 HOH HOH . G 4 HOH B 4 263 263 HOH HOH . G 4 HOH B 5 264 264 HOH HOH . G 4 HOH B 6 265 265 HOH HOH . G 4 HOH B 7 266 266 HOH HOH . G 4 HOH B 8 267 267 HOH HOH . G 4 HOH B 9 268 268 HOH HOH . G 4 HOH B 10 269 269 HOH HOH . G 4 HOH B 11 270 270 HOH HOH . G 4 HOH B 12 271 271 HOH HOH . G 4 HOH B 13 272 272 HOH HOH . G 4 HOH B 14 273 273 HOH HOH . G 4 HOH B 15 274 274 HOH HOH . G 4 HOH B 16 275 275 HOH HOH . G 4 HOH B 17 276 276 HOH HOH . G 4 HOH B 18 277 277 HOH HOH . G 4 HOH B 19 278 278 HOH HOH . G 4 HOH B 20 279 279 HOH HOH . G 4 HOH B 21 280 280 HOH HOH . G 4 HOH B 22 281 281 HOH HOH . G 4 HOH B 23 282 282 HOH HOH . G 4 HOH B 24 283 283 HOH HOH . G 4 HOH B 25 284 284 HOH HOH . G 4 HOH B 26 285 285 HOH HOH . G 4 HOH B 27 286 286 HOH HOH . G 4 HOH B 28 287 287 HOH HOH . G 4 HOH B 29 288 288 HOH HOH . G 4 HOH B 30 289 289 HOH HOH . G 4 HOH B 31 290 290 HOH HOH . G 4 HOH B 32 291 291 HOH HOH . G 4 HOH B 33 292 292 HOH HOH . G 4 HOH B 34 293 293 HOH HOH . G 4 HOH B 35 294 294 HOH HOH . G 4 HOH B 36 295 295 HOH HOH . G 4 HOH B 37 296 296 HOH HOH . G 4 HOH B 38 297 297 HOH HOH . G 4 HOH B 39 298 298 HOH HOH . G 4 HOH B 40 299 299 HOH HOH . G 4 HOH B 41 300 300 HOH HOH . G 4 HOH B 42 301 301 HOH HOH . G 4 HOH B 43 302 302 HOH HOH . G 4 HOH B 44 303 303 HOH HOH . G 4 HOH B 45 304 304 HOH HOH . G 4 HOH B 46 305 305 HOH HOH . G 4 HOH B 47 306 306 HOH HOH . G 4 HOH B 48 307 307 HOH HOH . G 4 HOH B 49 308 308 HOH HOH . G 4 HOH B 50 309 309 HOH HOH . G 4 HOH B 51 310 310 HOH HOH . G 4 HOH B 52 311 311 HOH HOH . G 4 HOH B 53 312 312 HOH HOH . G 4 HOH B 54 313 313 HOH HOH . G 4 HOH B 55 314 314 HOH HOH . G 4 HOH B 56 315 315 HOH HOH . G 4 HOH B 57 316 316 HOH HOH . G 4 HOH B 58 317 317 HOH HOH . G 4 HOH B 59 318 318 HOH HOH . G 4 HOH B 60 319 319 HOH HOH . G 4 HOH B 61 320 320 HOH HOH . G 4 HOH B 62 321 321 HOH HOH . G 4 HOH B 63 322 322 HOH HOH . G 4 HOH B 64 323 323 HOH HOH . G 4 HOH B 65 324 324 HOH HOH . G 4 HOH B 66 325 325 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 SRT . . . E 3 35.988 67.981 2.071 0.5 68.28 ? O1 SRT 259 B 1 HETATM 2 O O11 SRT . . . E 3 37.726 67.04 3.022 0.5 66.04 ? O11 SRT 259 B 1 HETATM 3 C C1 SRT . . . E 3 37.102 67.396 1.991 0.5 68.64 ? C1 SRT 259 B 1 HETATM 4 C C2 SRT . . . E 3 37.727 67.101 0.629 0.5 68.48 ? C2 SRT 259 B 1 HETATM 5 O O2 SRT . . . E 3 37.318 65.809 0.18 0.5 67.97 ? O2 SRT 259 B 1 HETATM 6 C C3 SRT . . . E 3 37.394 68.141 -0.455 0.5 68.44 ? C3 SRT 259 B 1 HETATM 7 O O3 SRT . . . E 3 38.471 69.088 -0.474 0.5 68.09 ? O3 SRT 259 B 1 HETATM 8 C C4 SRT . . . E 3 37.223 67.572 -1.86 0.5 69.22 ? C4 SRT 259 B 1 HETATM 9 O O4 SRT . . . E 3 38.145 67.722 -2.699 0.5 67.35 ? O4 SRT 259 B 1 HETATM 10 O O41 SRT . . . E 3 36.156 66.979 -2.176 0.5 69.55 ? O41 SRT 259 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #