data_3T8B
#
_model_server_result.job_id            aa-LZMb5sA-_Q8T-hpdi0w 
_model_server_result.datetime_utc      '2024-10-14 18:30:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3t8b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":315}' 
#
_entry.id    3T8B 
#
_exptl.entry_id    3T8B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3T8B 
_cell.length_a            132.233 
_cell.length_b            132.233 
_cell.length_c            71.139 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3T8B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3T8B 
_atom_sites.fract_transf_matrix[1][1]    0.007562 
_atom_sites.fract_transf_matrix[1][2]    0.004366 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008732 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014057 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 315 301 GOL GOL . 
D 3 HOH A 1 316 2 HOH HOH . 
D 3 HOH A 2 317 4 HOH HOH . 
D 3 HOH A 3 318 5 HOH HOH . 
D 3 HOH A 4 319 319 HOH HOH . 
D 3 HOH A 5 320 6 HOH HOH . 
D 3 HOH A 6 321 8 HOH HOH . 
D 3 HOH A 7 322 9 HOH HOH . 
D 3 HOH A 8 323 13 HOH HOH . 
D 3 HOH A 9 324 14 HOH HOH . 
D 3 HOH A 10 325 15 HOH HOH . 
D 3 HOH A 11 326 326 HOH HOH . 
D 3 HOH A 12 327 17 HOH HOH . 
D 3 HOH A 13 328 19 HOH HOH . 
D 3 HOH A 14 329 20 HOH HOH . 
D 3 HOH A 15 330 21 HOH HOH . 
D 3 HOH A 16 331 331 HOH HOH . 
D 3 HOH A 17 332 24 HOH HOH . 
D 3 HOH A 18 333 26 HOH HOH . 
D 3 HOH A 19 334 29 HOH HOH . 
D 3 HOH A 20 335 30 HOH HOH . 
D 3 HOH A 21 336 31 HOH HOH . 
D 3 HOH A 22 337 32 HOH HOH . 
D 3 HOH A 23 338 33 HOH HOH . 
D 3 HOH A 24 339 35 HOH HOH . 
D 3 HOH A 25 340 340 HOH HOH . 
D 3 HOH A 26 341 36 HOH HOH . 
D 3 HOH A 27 342 38 HOH HOH . 
D 3 HOH A 28 343 39 HOH HOH . 
D 3 HOH A 29 344 40 HOH HOH . 
D 3 HOH A 30 345 41 HOH HOH . 
D 3 HOH A 31 346 42 HOH HOH . 
D 3 HOH A 32 347 43 HOH HOH . 
D 3 HOH A 33 348 348 HOH HOH . 
D 3 HOH A 34 349 349 HOH HOH . 
D 3 HOH A 35 350 44 HOH HOH . 
D 3 HOH A 36 351 45 HOH HOH . 
D 3 HOH A 37 352 46 HOH HOH . 
D 3 HOH A 38 353 48 HOH HOH . 
D 3 HOH A 39 354 354 HOH HOH . 
D 3 HOH A 40 355 49 HOH HOH . 
D 3 HOH A 41 356 356 HOH HOH . 
D 3 HOH A 42 357 50 HOH HOH . 
D 3 HOH A 43 358 52 HOH HOH . 
D 3 HOH A 44 359 53 HOH HOH . 
D 3 HOH A 45 360 54 HOH HOH . 
D 3 HOH A 46 361 55 HOH HOH . 
D 3 HOH A 47 362 56 HOH HOH . 
D 3 HOH A 48 363 363 HOH HOH . 
D 3 HOH A 49 364 57 HOH HOH . 
D 3 HOH A 50 365 59 HOH HOH . 
D 3 HOH A 51 366 60 HOH HOH . 
D 3 HOH A 52 367 65 HOH HOH . 
D 3 HOH A 53 368 66 HOH HOH . 
D 3 HOH A 54 369 67 HOH HOH . 
D 3 HOH A 55 370 68 HOH HOH . 
D 3 HOH A 56 371 69 HOH HOH . 
D 3 HOH A 57 372 70 HOH HOH . 
D 3 HOH A 58 373 72 HOH HOH . 
D 3 HOH A 59 374 73 HOH HOH . 
D 3 HOH A 60 375 75 HOH HOH . 
D 3 HOH A 61 376 78 HOH HOH . 
D 3 HOH A 62 377 79 HOH HOH . 
D 3 HOH A 63 378 81 HOH HOH . 
D 3 HOH A 64 379 85 HOH HOH . 
D 3 HOH A 65 380 86 HOH HOH . 
D 3 HOH A 66 381 87 HOH HOH . 
D 3 HOH A 67 382 88 HOH HOH . 
D 3 HOH A 68 383 90 HOH HOH . 
D 3 HOH A 69 384 91 HOH HOH . 
D 3 HOH A 70 385 385 HOH HOH . 
D 3 HOH A 71 386 92 HOH HOH . 
D 3 HOH A 72 387 94 HOH HOH . 
D 3 HOH A 73 388 388 HOH HOH . 
D 3 HOH A 74 389 95 HOH HOH . 
D 3 HOH A 75 390 96 HOH HOH . 
D 3 HOH A 76 391 98 HOH HOH . 
D 3 HOH A 77 392 99 HOH HOH . 
D 3 HOH A 78 393 100 HOH HOH . 
D 3 HOH A 79 394 101 HOH HOH . 
D 3 HOH A 80 395 102 HOH HOH . 
D 3 HOH A 81 396 103 HOH HOH . 
D 3 HOH A 82 397 105 HOH HOH . 
D 3 HOH A 83 398 106 HOH HOH . 
D 3 HOH A 84 399 108 HOH HOH . 
D 3 HOH A 85 400 110 HOH HOH . 
D 3 HOH A 86 401 112 HOH HOH . 
D 3 HOH A 87 402 113 HOH HOH . 
D 3 HOH A 88 403 115 HOH HOH . 
D 3 HOH A 89 404 117 HOH HOH . 
D 3 HOH A 90 405 118 HOH HOH . 
D 3 HOH A 91 406 119 HOH HOH . 
D 3 HOH A 92 407 120 HOH HOH . 
D 3 HOH A 93 408 121 HOH HOH . 
D 3 HOH A 94 409 123 HOH HOH . 
D 3 HOH A 95 410 125 HOH HOH . 
D 3 HOH A 96 411 126 HOH HOH . 
D 3 HOH A 97 412 129 HOH HOH . 
D 3 HOH A 98 413 130 HOH HOH . 
D 3 HOH A 99 414 131 HOH HOH . 
D 3 HOH A 100 415 135 HOH HOH . 
D 3 HOH A 101 416 416 HOH HOH . 
D 3 HOH A 102 417 136 HOH HOH . 
D 3 HOH A 103 418 143 HOH HOH . 
D 3 HOH A 104 419 146 HOH HOH . 
D 3 HOH A 105 420 147 HOH HOH . 
D 3 HOH A 106 421 148 HOH HOH . 
D 3 HOH A 107 422 151 HOH HOH . 
D 3 HOH A 108 423 152 HOH HOH . 
D 3 HOH A 109 424 157 HOH HOH . 
D 3 HOH A 110 425 161 HOH HOH . 
D 3 HOH A 111 426 164 HOH HOH . 
D 3 HOH A 112 427 427 HOH HOH . 
D 3 HOH A 113 428 165 HOH HOH . 
D 3 HOH A 114 429 166 HOH HOH . 
D 3 HOH A 115 430 167 HOH HOH . 
D 3 HOH A 116 431 171 HOH HOH . 
D 3 HOH A 117 432 177 HOH HOH . 
D 3 HOH A 118 433 183 HOH HOH . 
D 3 HOH A 119 434 184 HOH HOH . 
D 3 HOH A 120 435 185 HOH HOH . 
D 3 HOH A 121 436 186 HOH HOH . 
D 3 HOH A 122 437 187 HOH HOH . 
D 3 HOH A 123 438 188 HOH HOH . 
D 3 HOH A 124 439 189 HOH HOH . 
D 3 HOH A 125 440 190 HOH HOH . 
D 3 HOH A 126 441 191 HOH HOH . 
D 3 HOH A 127 442 192 HOH HOH . 
D 3 HOH A 128 443 195 HOH HOH . 
D 3 HOH A 129 444 197 HOH HOH . 
D 3 HOH A 130 445 198 HOH HOH . 
D 3 HOH A 131 446 200 HOH HOH . 
D 3 HOH A 132 447 202 HOH HOH . 
D 3 HOH A 133 448 205 HOH HOH . 
D 3 HOH A 134 449 207 HOH HOH . 
D 3 HOH A 135 450 209 HOH HOH . 
D 3 HOH A 136 451 213 HOH HOH . 
D 3 HOH A 137 452 214 HOH HOH . 
D 3 HOH A 138 453 218 HOH HOH . 
D 3 HOH A 139 454 219 HOH HOH . 
D 3 HOH A 140 455 220 HOH HOH . 
D 3 HOH A 141 456 221 HOH HOH . 
D 3 HOH A 142 457 223 HOH HOH . 
D 3 HOH A 143 458 229 HOH HOH . 
D 3 HOH A 144 459 230 HOH HOH . 
D 3 HOH A 145 460 231 HOH HOH . 
D 3 HOH A 146 461 234 HOH HOH . 
D 3 HOH A 147 462 238 HOH HOH . 
D 3 HOH A 148 463 240 HOH HOH . 
D 3 HOH A 149 464 245 HOH HOH . 
D 3 HOH A 150 465 247 HOH HOH . 
D 3 HOH A 151 466 249 HOH HOH . 
D 3 HOH A 152 467 250 HOH HOH . 
D 3 HOH A 153 468 252 HOH HOH . 
D 3 HOH A 154 469 253 HOH HOH . 
D 3 HOH A 155 470 258 HOH HOH . 
D 3 HOH A 156 471 259 HOH HOH . 
D 3 HOH A 157 472 265 HOH HOH . 
D 3 HOH A 158 473 266 HOH HOH . 
D 3 HOH A 159 474 267 HOH HOH . 
D 3 HOH A 160 475 475 HOH HOH . 
D 3 HOH A 161 476 268 HOH HOH . 
D 3 HOH A 162 477 477 HOH HOH . 
D 3 HOH A 163 478 478 HOH HOH . 
D 3 HOH A 164 479 269 HOH HOH . 
D 3 HOH A 165 480 272 HOH HOH . 
D 3 HOH A 166 481 283 HOH HOH . 
D 3 HOH A 167 482 284 HOH HOH . 
D 3 HOH A 168 483 285 HOH HOH . 
D 3 HOH A 169 484 288 HOH HOH . 
D 3 HOH A 170 485 298 HOH HOH . 
D 3 HOH A 171 486 306 HOH HOH . 
D 3 HOH A 172 487 309 HOH HOH . 
D 3 HOH A 173 488 312 HOH HOH . 
D 3 HOH A 174 494 494 HOH HOH . 
D 3 HOH A 175 512 512 HOH HOH . 
D 3 HOH A 176 561 561 HOH HOH . 
D 3 HOH A 177 566 566 HOH HOH . 
D 3 HOH A 178 571 571 HOH HOH . 
E 3 HOH B 1 315 1 HOH HOH . 
E 3 HOH B 2 316 3 HOH HOH . 
E 3 HOH B 3 317 7 HOH HOH . 
E 3 HOH B 4 318 10 HOH HOH . 
E 3 HOH B 5 319 11 HOH HOH . 
E 3 HOH B 6 320 320 HOH HOH . 
E 3 HOH B 7 321 12 HOH HOH . 
E 3 HOH B 8 322 16 HOH HOH . 
E 3 HOH B 9 323 18 HOH HOH . 
E 3 HOH B 10 324 324 HOH HOH . 
E 3 HOH B 11 325 22 HOH HOH . 
E 3 HOH B 12 326 23 HOH HOH . 
E 3 HOH B 13 327 25 HOH HOH . 
E 3 HOH B 14 328 27 HOH HOH . 
E 3 HOH B 15 329 28 HOH HOH . 
E 3 HOH B 16 330 34 HOH HOH . 
E 3 HOH B 17 331 37 HOH HOH . 
E 3 HOH B 18 332 47 HOH HOH . 
E 3 HOH B 19 333 51 HOH HOH . 
E 3 HOH B 20 334 58 HOH HOH . 
E 3 HOH B 21 335 61 HOH HOH . 
E 3 HOH B 22 336 62 HOH HOH . 
E 3 HOH B 23 337 63 HOH HOH . 
E 3 HOH B 24 338 64 HOH HOH . 
E 3 HOH B 25 339 71 HOH HOH . 
E 3 HOH B 26 340 74 HOH HOH . 
E 3 HOH B 27 341 76 HOH HOH . 
E 3 HOH B 28 342 77 HOH HOH . 
E 3 HOH B 29 343 80 HOH HOH . 
E 3 HOH B 30 344 82 HOH HOH . 
E 3 HOH B 31 345 83 HOH HOH . 
E 3 HOH B 32 346 84 HOH HOH . 
E 3 HOH B 33 347 89 HOH HOH . 
E 3 HOH B 34 348 104 HOH HOH . 
E 3 HOH B 35 349 107 HOH HOH . 
E 3 HOH B 36 350 109 HOH HOH . 
E 3 HOH B 37 351 351 HOH HOH . 
E 3 HOH B 38 352 352 HOH HOH . 
E 3 HOH B 39 353 111 HOH HOH . 
E 3 HOH B 40 354 122 HOH HOH . 
E 3 HOH B 41 355 124 HOH HOH . 
E 3 HOH B 42 356 133 HOH HOH . 
E 3 HOH B 43 357 138 HOH HOH . 
E 3 HOH B 44 358 139 HOH HOH . 
E 3 HOH B 45 359 359 HOH HOH . 
E 3 HOH B 46 360 140 HOH HOH . 
E 3 HOH B 47 361 141 HOH HOH . 
E 3 HOH B 48 362 142 HOH HOH . 
E 3 HOH B 49 363 144 HOH HOH . 
E 3 HOH B 50 364 155 HOH HOH . 
E 3 HOH B 51 365 156 HOH HOH . 
E 3 HOH B 52 366 158 HOH HOH . 
E 3 HOH B 53 367 169 HOH HOH . 
E 3 HOH B 54 368 170 HOH HOH . 
E 3 HOH B 55 369 172 HOH HOH . 
E 3 HOH B 56 370 174 HOH HOH . 
E 3 HOH B 57 371 178 HOH HOH . 
E 3 HOH B 58 372 179 HOH HOH . 
E 3 HOH B 59 373 180 HOH HOH . 
E 3 HOH B 60 374 181 HOH HOH . 
E 3 HOH B 61 375 193 HOH HOH . 
E 3 HOH B 62 376 199 HOH HOH . 
E 3 HOH B 63 377 377 HOH HOH . 
E 3 HOH B 64 378 378 HOH HOH . 
E 3 HOH B 65 379 203 HOH HOH . 
E 3 HOH B 66 380 210 HOH HOH . 
E 3 HOH B 67 381 381 HOH HOH . 
E 3 HOH B 68 382 212 HOH HOH . 
E 3 HOH B 69 383 215 HOH HOH . 
E 3 HOH B 70 384 216 HOH HOH . 
E 3 HOH B 71 385 217 HOH HOH . 
E 3 HOH B 72 386 222 HOH HOH . 
E 3 HOH B 73 387 224 HOH HOH . 
E 3 HOH B 74 388 225 HOH HOH . 
E 3 HOH B 75 389 226 HOH HOH . 
E 3 HOH B 76 390 227 HOH HOH . 
E 3 HOH B 77 391 232 HOH HOH . 
E 3 HOH B 78 392 392 HOH HOH . 
E 3 HOH B 79 393 236 HOH HOH . 
E 3 HOH B 80 394 239 HOH HOH . 
E 3 HOH B 81 395 395 HOH HOH . 
E 3 HOH B 82 396 241 HOH HOH . 
E 3 HOH B 83 397 242 HOH HOH . 
E 3 HOH B 84 398 246 HOH HOH . 
E 3 HOH B 85 399 257 HOH HOH . 
E 3 HOH B 86 400 261 HOH HOH . 
E 3 HOH B 87 401 262 HOH HOH . 
E 3 HOH B 88 402 263 HOH HOH . 
E 3 HOH B 89 403 271 HOH HOH . 
E 3 HOH B 90 404 274 HOH HOH . 
E 3 HOH B 91 405 277 HOH HOH . 
E 3 HOH B 92 406 289 HOH HOH . 
E 3 HOH B 93 407 291 HOH HOH . 
E 3 HOH B 94 408 295 HOH HOH . 
E 3 HOH B 95 409 301 HOH HOH . 
E 3 HOH B 96 425 425 HOH HOH . 
E 3 HOH B 97 476 476 HOH HOH . 
E 3 HOH B 98 560 560 HOH HOH . 
E 3 HOH B 99 568 568 HOH HOH . 
E 3 HOH B 100 569 569 HOH HOH . 
E 3 HOH B 101 570 570 HOH HOH . 
E 3 HOH B 102 573 573 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -23.269 -5.041 -29.586 1 20.82 ? C1 GOL 315 A 1 
HETATM 2 O O1 GOL . . . C 2 -22.516 -6.24 -29.815 1 21.25 ? O1 GOL 315 A 1 
HETATM 3 C C2 GOL . . . C 2 -24.189 -4.763 -30.771 1 20.84 ? C2 GOL 315 A 1 
HETATM 4 O O2 GOL . . . C 2 -25.286 -5.687 -30.769 1 21.84 ? O2 GOL 315 A 1 
HETATM 5 C C3 GOL . . . C 2 -23.405 -4.899 -32.075 1 22.08 ? C3 GOL 315 A 1 
HETATM 6 O O3 GOL . . . C 2 -24.215 -4.441 -33.167 1 23.11 ? O3 GOL 315 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           646 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#