data_3T9I # _model_server_result.job_id R9J_J0ntRPqf6wGKp7rYdw _model_server_result.datetime_utc '2024-11-22 23:17:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 3T9I # _exptl.entry_id 3T9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 317.341 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methoxy-4-(3-phenyl-2H-pyrazolo[3,4-b]pyridin-6-yl)phenol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3T9I _cell.length_a 96.215 _cell.length_b 96.215 _cell.length_c 80.245 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 275 A SER 260 1_555 A N SEP 276 A SEP 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C SEP 276 A SEP 261 1_555 A N GLU 277 A GLU 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C19 H15 N3 O2' _chem_comp.formula_weight 317.341 _chem_comp.id 3T9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-methoxy-4-(3-phenyl-2H-pyrazolo[3,4-b]pyridin-6-yl)phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N5 N1 3T9 sing 1 n y N1 C4 3T9 sing 2 n y C3 C2 3T9 sing 3 n y C2 C4 3T9 doub 4 n y C2 C8 3T9 sing 5 n y N6 C3 3T9 sing 6 n y N5 C3 3T9 doub 7 n y C4 C13 3T9 sing 8 n n N6 C7 3T9 doub 9 n y C9 C7 3T9 sing 10 n n C7 C14 3T9 sing 11 n y C14 C8 3T9 doub 12 n y C8 H8 3T9 sing 13 n n C10 C9 3T9 doub 14 n y C9 C15 3T9 sing 15 n y C11 C10 3T9 sing 16 n y C10 H10 3T9 sing 17 n n O17 C11 3T9 sing 18 n n C11 C12 3T9 doub 19 n y O18 C12 3T9 sing 20 n n C12 C16 3T9 sing 21 n y C13 C19 3T9 doub 22 n y C13 C20 3T9 sing 23 n y C14 H14 3T9 sing 24 n n C16 C15 3T9 doub 25 n y C15 H15 3T9 sing 26 n n C16 H16 3T9 sing 27 n n C21 O17 3T9 sing 28 n n O18 HO18 3T9 sing 29 n n C19 C23 3T9 sing 30 n y C19 H19 3T9 sing 31 n n C20 C22 3T9 doub 32 n y C20 H20 3T9 sing 33 n n C21 H21 3T9 sing 34 n n C21 H21A 3T9 sing 35 n n C21 H21B 3T9 sing 36 n n C22 C24 3T9 sing 37 n y C22 H22 3T9 sing 38 n n C23 C24 3T9 doub 39 n y C23 H23 3T9 sing 40 n n C24 H24 3T9 sing 41 n n N1 HN1 3T9 sing 42 n n # _atom_sites.entry_id 3T9I _atom_sites.fract_transf_matrix[1][1] 0.010393 _atom_sites.fract_transf_matrix[1][2] 0.006001 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012001 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3T9 A 1 401 401 3T9 3T9 . C 3 HOH A 1 314 6 HOH HOH . C 3 HOH A 2 315 8 HOH HOH . C 3 HOH A 3 316 10 HOH HOH . C 3 HOH A 4 317 16 HOH HOH . C 3 HOH A 5 318 18 HOH HOH . C 3 HOH A 6 319 20 HOH HOH . C 3 HOH A 7 320 21 HOH HOH . C 3 HOH A 8 321 24 HOH HOH . C 3 HOH A 9 322 27 HOH HOH . C 3 HOH A 10 323 31 HOH HOH . C 3 HOH A 11 324 32 HOH HOH . C 3 HOH A 12 325 34 HOH HOH . C 3 HOH A 13 326 35 HOH HOH . C 3 HOH A 14 327 37 HOH HOH . C 3 HOH A 15 328 42 HOH HOH . C 3 HOH A 16 329 44 HOH HOH . C 3 HOH A 17 330 45 HOH HOH . C 3 HOH A 18 331 46 HOH HOH . C 3 HOH A 19 332 47 HOH HOH . C 3 HOH A 20 333 48 HOH HOH . C 3 HOH A 21 334 49 HOH HOH . C 3 HOH A 22 335 51 HOH HOH . C 3 HOH A 23 336 52 HOH HOH . C 3 HOH A 24 337 53 HOH HOH . C 3 HOH A 25 338 54 HOH HOH . C 3 HOH A 26 339 55 HOH HOH . C 3 HOH A 27 340 56 HOH HOH . C 3 HOH A 28 341 58 HOH HOH . C 3 HOH A 29 342 59 HOH HOH . C 3 HOH A 30 343 61 HOH HOH . C 3 HOH A 31 344 62 HOH HOH . C 3 HOH A 32 345 63 HOH HOH . C 3 HOH A 33 346 64 HOH HOH . C 3 HOH A 34 347 65 HOH HOH . C 3 HOH A 35 348 66 HOH HOH . C 3 HOH A 36 349 67 HOH HOH . C 3 HOH A 37 350 68 HOH HOH . C 3 HOH A 38 351 69 HOH HOH . C 3 HOH A 39 352 70 HOH HOH . C 3 HOH A 40 353 71 HOH HOH . C 3 HOH A 41 354 72 HOH HOH . C 3 HOH A 42 355 75 HOH HOH . C 3 HOH A 43 356 77 HOH HOH . C 3 HOH A 44 357 79 HOH HOH . C 3 HOH A 45 358 80 HOH HOH . C 3 HOH A 46 359 81 HOH HOH . C 3 HOH A 47 360 82 HOH HOH . C 3 HOH A 48 361 84 HOH HOH . C 3 HOH A 49 362 85 HOH HOH . C 3 HOH A 50 363 86 HOH HOH . C 3 HOH A 51 364 87 HOH HOH . C 3 HOH A 52 365 88 HOH HOH . C 3 HOH A 53 366 90 HOH HOH . C 3 HOH A 54 367 91 HOH HOH . C 3 HOH A 55 368 92 HOH HOH . C 3 HOH A 56 369 93 HOH HOH . C 3 HOH A 57 370 94 HOH HOH . C 3 HOH A 58 371 95 HOH HOH . C 3 HOH A 59 372 96 HOH HOH . C 3 HOH A 60 373 97 HOH HOH . C 3 HOH A 61 374 98 HOH HOH . C 3 HOH A 62 375 99 HOH HOH . C 3 HOH A 63 376 100 HOH HOH . C 3 HOH A 64 377 101 HOH HOH . C 3 HOH A 65 378 102 HOH HOH . C 3 HOH A 66 379 103 HOH HOH . C 3 HOH A 67 380 104 HOH HOH . C 3 HOH A 68 381 105 HOH HOH . C 3 HOH A 69 382 106 HOH HOH . C 3 HOH A 70 383 107 HOH HOH . C 3 HOH A 71 384 108 HOH HOH . C 3 HOH A 72 385 109 HOH HOH . C 3 HOH A 73 386 110 HOH HOH . C 3 HOH A 74 387 111 HOH HOH . C 3 HOH A 75 388 112 HOH HOH . C 3 HOH A 76 389 113 HOH HOH . C 3 HOH A 77 390 114 HOH HOH . C 3 HOH A 78 391 115 HOH HOH . C 3 HOH A 79 392 116 HOH HOH . C 3 HOH A 80 393 117 HOH HOH . C 3 HOH A 81 394 118 HOH HOH . C 3 HOH A 82 395 119 HOH HOH . C 3 HOH A 83 396 120 HOH HOH . C 3 HOH A 84 397 121 HOH HOH . C 3 HOH A 85 398 122 HOH HOH . C 3 HOH A 86 399 123 HOH HOH . C 3 HOH A 87 400 124 HOH HOH . C 3 HOH A 88 402 125 HOH HOH . C 3 HOH A 89 403 126 HOH HOH . C 3 HOH A 90 404 127 HOH HOH . C 3 HOH A 91 405 128 HOH HOH . C 3 HOH A 92 406 129 HOH HOH . C 3 HOH A 93 407 130 HOH HOH . C 3 HOH A 94 408 131 HOH HOH . C 3 HOH A 95 409 132 HOH HOH . C 3 HOH A 96 410 133 HOH HOH . C 3 HOH A 97 411 134 HOH HOH . C 3 HOH A 98 412 135 HOH HOH . C 3 HOH A 99 413 136 HOH HOH . C 3 HOH A 100 414 137 HOH HOH . C 3 HOH A 101 415 139 HOH HOH . C 3 HOH A 102 416 148 HOH HOH . C 3 HOH A 103 417 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 3T9 . . . B 2 -22.753 38.329 -0.627 1 28.5 ? N1 3T9 401 A 1 HETATM 2 C C2 3T9 . . . B 2 -22.059 36.365 0.143 1 37.17 ? C2 3T9 401 A 1 HETATM 3 C C3 3T9 . . . B 2 -22.229 36.271 -1.219 1 37.07 ? C3 3T9 401 A 1 HETATM 4 C C4 3T9 . . . B 2 -22.376 37.682 0.507 1 34.97 ? C4 3T9 401 A 1 HETATM 5 N N5 3T9 . . . B 2 -22.657 37.448 -1.717 1 38.68 ? N5 3T9 401 A 1 HETATM 6 N N6 3T9 . . . B 2 -21.992 35.135 -1.914 1 36.17 ? N6 3T9 401 A 1 HETATM 7 C C7 3T9 . . . B 2 -21.552 34.035 -1.262 1 34.5 ? C7 3T9 401 A 1 HETATM 8 C C8 3T9 . . . B 2 -21.614 35.245 0.848 1 34.06 ? C8 3T9 401 A 1 HETATM 9 C C9 3T9 . . . B 2 -21.329 32.794 -2.064 1 29.07 ? C9 3T9 401 A 1 HETATM 10 C C10 3T9 . . . B 2 -22.197 32.554 -3.125 1 24.35 ? C10 3T9 401 A 1 HETATM 11 C C11 3T9 . . . B 2 -22.07 31.413 -3.907 1 36.57 ? C11 3T9 401 A 1 HETATM 12 C C12 3T9 . . . B 2 -21.071 30.501 -3.624 1 43.32 ? C12 3T9 401 A 1 HETATM 13 C C13 3T9 . . . B 2 -22.397 38.308 1.865 1 33.65 ? C13 3T9 401 A 1 HETATM 14 C C14 3T9 . . . B 2 -21.369 34.069 0.128 1 32.8 ? C14 3T9 401 A 1 HETATM 15 C C15 3T9 . . . B 2 -20.333 31.869 -1.771 1 31.55 ? C15 3T9 401 A 1 HETATM 16 C C16 3T9 . . . B 2 -20.202 30.723 -2.553 1 35.94 ? C16 3T9 401 A 1 HETATM 17 O O17 3T9 . . . B 2 -22.922 31.175 -4.958 1 35.85 ? O17 3T9 401 A 1 HETATM 18 O O18 3T9 . . . B 2 -20.962 29.387 -4.405 1 33.57 ? O18 3T9 401 A 1 HETATM 19 C C19 3T9 . . . B 2 -22.366 39.696 1.993 1 43.97 ? C19 3T9 401 A 1 HETATM 20 C C20 3T9 . . . B 2 -22.487 37.521 3.009 1 45.03 ? C20 3T9 401 A 1 HETATM 21 C C21 3T9 . . . B 2 -24.021 32.045 -5.227 1 25.25 ? C21 3T9 401 A 1 HETATM 22 C C22 3T9 . . . B 2 -22.526 38.117 4.271 1 49.96 ? C22 3T9 401 A 1 HETATM 23 C C23 3T9 . . . B 2 -22.403 40.293 3.256 1 47.89 ? C23 3T9 401 A 1 HETATM 24 C C24 3T9 . . . B 2 -22.483 39.505 4.398 1 42.3 ? C24 3T9 401 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #