data_3T9O # _model_server_result.job_id a7LEjQkHDBg3SnGxfrfEtA _model_server_result.datetime_utc '2024-11-13 18:30:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3t9o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 3T9O # _exptl.entry_id 3T9O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.04 _cell.angle_gamma 90 _cell.entry_id 3T9O _cell.length_a 121.46 _cell.length_b 60.26 _cell.length_c 38.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3T9O _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 23 A HIS 22 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc2 A SG CYS 53 A CYS 52 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 A NE2 HIS 80 A HIS 79 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc4 A NE2 HIS 84 A HIS 83 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc5 B NE2 HIS 23 B HIS 22 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc6 B SG CYS 53 B CYS 52 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc7 B NE2 HIS 80 B HIS 79 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 B NE2 HIS 84 B HIS 83 1_555 D ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3T9O _atom_sites.fract_transf_matrix[1][1] 0.008233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00131 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026328 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 502 502 ZN ZN . D 2 ZN B 1 502 502 ZN ZN . E 3 HOH A 1 135 17 HOH HOH . E 3 HOH A 2 136 18 HOH HOH . E 3 HOH A 3 137 21 HOH HOH . E 3 HOH A 4 138 23 HOH HOH . E 3 HOH A 5 139 25 HOH HOH . E 3 HOH A 6 140 26 HOH HOH . E 3 HOH A 7 141 29 HOH HOH . E 3 HOH A 8 142 30 HOH HOH . E 3 HOH A 9 143 35 HOH HOH . E 3 HOH A 10 144 36 HOH HOH . E 3 HOH A 11 145 38 HOH HOH . E 3 HOH A 12 146 44 HOH HOH . E 3 HOH A 13 147 45 HOH HOH . E 3 HOH A 14 148 50 HOH HOH . E 3 HOH A 15 149 52 HOH HOH . E 3 HOH A 16 150 53 HOH HOH . E 3 HOH A 17 151 59 HOH HOH . E 3 HOH A 18 152 66 HOH HOH . E 3 HOH A 19 153 69 HOH HOH . E 3 HOH A 20 154 73 HOH HOH . E 3 HOH A 21 155 81 HOH HOH . F 3 HOH B 1 135 1 HOH HOH . F 3 HOH B 2 136 2 HOH HOH . F 3 HOH B 3 137 3 HOH HOH . F 3 HOH B 4 138 4 HOH HOH . F 3 HOH B 5 139 5 HOH HOH . F 3 HOH B 6 140 8 HOH HOH . F 3 HOH B 7 141 11 HOH HOH . F 3 HOH B 8 142 14 HOH HOH . F 3 HOH B 9 143 15 HOH HOH . F 3 HOH B 10 144 16 HOH HOH . F 3 HOH B 11 145 19 HOH HOH . F 3 HOH B 12 146 22 HOH HOH . F 3 HOH B 13 147 27 HOH HOH . F 3 HOH B 14 148 28 HOH HOH . F 3 HOH B 15 149 32 HOH HOH . F 3 HOH B 16 150 33 HOH HOH . F 3 HOH B 17 151 34 HOH HOH . F 3 HOH B 18 152 37 HOH HOH . F 3 HOH B 19 153 39 HOH HOH . F 3 HOH B 20 154 40 HOH HOH . F 3 HOH B 21 155 43 HOH HOH . F 3 HOH B 22 156 47 HOH HOH . F 3 HOH B 23 157 51 HOH HOH . F 3 HOH B 24 158 54 HOH HOH . F 3 HOH B 25 159 55 HOH HOH . F 3 HOH B 26 160 56 HOH HOH . F 3 HOH B 27 161 57 HOH HOH . F 3 HOH B 28 162 58 HOH HOH . F 3 HOH B 29 163 61 HOH HOH . F 3 HOH B 30 164 63 HOH HOH . F 3 HOH B 31 165 65 HOH HOH . F 3 HOH B 32 166 67 HOH HOH . F 3 HOH B 33 167 68 HOH HOH . F 3 HOH B 34 168 71 HOH HOH . F 3 HOH B 35 169 72 HOH HOH . F 3 HOH B 36 170 75 HOH HOH . F 3 HOH B 37 171 76 HOH HOH . F 3 HOH B 38 172 78 HOH HOH . F 3 HOH B 39 173 79 HOH HOH . F 3 HOH B 40 174 80 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 25.301 _atom_site.Cartn_y 44.921 _atom_site.Cartn_z 1.045 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #