data_3TA0 # _model_server_result.job_id 5Lf-SMCkePuOqiJG6W1Gow _model_server_result.datetime_utc '2025-07-31 18:13:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ta0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":200}' # _entry.id 3TA0 # _exptl.entry_id 3TA0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 133.55 _cell.angle_gamma 90 _cell.entry_id 3TA0 _cell.length_a 123.751 _cell.length_b 93.626 _cell.length_c 88.644 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TA0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,M,N,O 1 1 D,E,F,J,K,L,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 54 n n PG O2G ATP sing 55 n n PG O3G ATP sing 56 n n PG O3B ATP sing 57 n n O2G HOG2 ATP sing 58 n n O3G HOG3 ATP sing 59 n n PB O1B ATP doub 60 n n PB O2B ATP sing 61 n n PB O3B ATP sing 62 n n PB O3A ATP sing 63 n n O2B HOB2 ATP sing 64 n n PA O1A ATP doub 65 n n PA O2A ATP sing 66 n n PA O3A ATP sing 67 n n PA O5' ATP sing 68 n n O2A HOA2 ATP sing 69 n n O5' C5' ATP sing 70 n n C5' C4' ATP sing 71 n n C5' "H5'1" ATP sing 72 n n C5' "H5'2" ATP sing 73 n n C4' O4' ATP sing 74 n n C4' C3' ATP sing 75 n n C4' H4' ATP sing 76 n n O4' C1' ATP sing 77 n n C3' O3' ATP sing 78 n n C3' C2' ATP sing 79 n n C3' H3' ATP sing 80 n n O3' HO3' ATP sing 81 n n C2' O2' ATP sing 82 n n C2' C1' ATP sing 83 n n C2' H2' ATP sing 84 n n O2' HO2' ATP sing 85 n n C1' N9 ATP sing 86 n n C1' H1' ATP sing 87 n n N9 C8 ATP sing 88 n y N9 C4 ATP sing 89 n y C8 N7 ATP doub 90 n y C8 H8 ATP sing 91 n n N7 C5 ATP sing 92 n y C5 C6 ATP sing 93 n y C5 C4 ATP doub 94 n y C6 N6 ATP sing 95 n n C6 N1 ATP doub 96 n y N6 HN61 ATP sing 97 n n N6 HN62 ATP sing 98 n n N1 C2 ATP sing 99 n y C2 N3 ATP doub 100 n y C2 H2 ATP sing 101 n n N3 C4 ATP sing 102 n y # _atom_sites.entry_id 3TA0 _atom_sites.fract_transf_matrix[1][1] 0.008081 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007682 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010681 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015565 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ATP A 1 200 200 ATP ATP . H 2 ATP B 1 200 200 ATP ATP . I 2 ATP C 1 200 200 ATP ATP . J 2 ATP D 1 200 200 ATP ATP . K 2 ATP E 1 200 200 ATP ATP . L 2 ATP F 1 200 200 ATP ATP . M 3 HOH A 1 119 1 HOH HOH . M 3 HOH A 2 120 5 HOH HOH . M 3 HOH A 3 121 8 HOH HOH . M 3 HOH A 4 122 15 HOH HOH . M 3 HOH A 5 123 20 HOH HOH . M 3 HOH A 6 124 29 HOH HOH . M 3 HOH A 7 125 31 HOH HOH . M 3 HOH A 8 126 40 HOH HOH . M 3 HOH A 9 127 44 HOH HOH . M 3 HOH A 10 128 49 HOH HOH . M 3 HOH A 11 129 51 HOH HOH . M 3 HOH A 12 130 52 HOH HOH . M 3 HOH A 13 131 53 HOH HOH . M 3 HOH A 14 132 54 HOH HOH . M 3 HOH A 15 133 55 HOH HOH . M 3 HOH A 16 134 56 HOH HOH . M 3 HOH A 17 135 58 HOH HOH . M 3 HOH A 18 136 60 HOH HOH . M 3 HOH A 19 137 61 HOH HOH . M 3 HOH A 20 138 62 HOH HOH . M 3 HOH A 21 139 63 HOH HOH . M 3 HOH A 22 140 64 HOH HOH . M 3 HOH A 23 141 109 HOH HOH . M 3 HOH A 24 142 110 HOH HOH . M 3 HOH A 25 143 111 HOH HOH . M 3 HOH A 26 144 112 HOH HOH . M 3 HOH A 27 145 113 HOH HOH . M 3 HOH A 28 146 114 HOH HOH . N 3 HOH B 1 119 6 HOH HOH . N 3 HOH B 2 120 11 HOH HOH . N 3 HOH B 3 121 28 HOH HOH . N 3 HOH B 4 122 57 HOH HOH . N 3 HOH B 5 123 59 HOH HOH . N 3 HOH B 6 124 65 HOH HOH . N 3 HOH B 7 125 66 HOH HOH . N 3 HOH B 8 126 67 HOH HOH . N 3 HOH B 9 127 68 HOH HOH . N 3 HOH B 10 128 69 HOH HOH . N 3 HOH B 11 129 71 HOH HOH . N 3 HOH B 12 130 72 HOH HOH . N 3 HOH B 13 131 73 HOH HOH . N 3 HOH B 14 132 115 HOH HOH . N 3 HOH B 15 133 116 HOH HOH . N 3 HOH B 16 134 117 HOH HOH . O 3 HOH C 1 119 119 HOH HOH . O 3 HOH C 2 121 2 HOH HOH . O 3 HOH C 3 122 33 HOH HOH . O 3 HOH C 4 123 46 HOH HOH . O 3 HOH C 5 124 47 HOH HOH . O 3 HOH C 6 125 70 HOH HOH . O 3 HOH C 7 126 75 HOH HOH . O 3 HOH C 8 127 76 HOH HOH . O 3 HOH C 9 128 77 HOH HOH . O 3 HOH C 10 129 78 HOH HOH . O 3 HOH C 11 130 79 HOH HOH . O 3 HOH C 12 131 80 HOH HOH . O 3 HOH C 13 132 118 HOH HOH . P 3 HOH D 1 119 3 HOH HOH . P 3 HOH D 2 120 120 HOH HOH . P 3 HOH D 3 121 16 HOH HOH . P 3 HOH D 4 122 81 HOH HOH . P 3 HOH D 5 123 82 HOH HOH . P 3 HOH D 6 124 83 HOH HOH . P 3 HOH D 7 125 86 HOH HOH . P 3 HOH D 8 126 89 HOH HOH . P 3 HOH D 9 127 90 HOH HOH . P 3 HOH D 10 128 93 HOH HOH . P 3 HOH D 11 129 94 HOH HOH . P 3 HOH D 12 130 108 HOH HOH . P 3 HOH D 13 131 12 HOH HOH . Q 3 HOH E 1 119 7 HOH HOH . Q 3 HOH E 2 120 19 HOH HOH . Q 3 HOH E 3 121 23 HOH HOH . Q 3 HOH E 4 122 25 HOH HOH . Q 3 HOH E 5 123 26 HOH HOH . Q 3 HOH E 6 124 35 HOH HOH . Q 3 HOH E 7 125 36 HOH HOH . Q 3 HOH E 8 126 37 HOH HOH . Q 3 HOH E 9 127 84 HOH HOH . Q 3 HOH E 10 128 85 HOH HOH . Q 3 HOH E 11 129 87 HOH HOH . Q 3 HOH E 12 130 88 HOH HOH . Q 3 HOH E 13 131 91 HOH HOH . Q 3 HOH E 14 132 92 HOH HOH . Q 3 HOH E 15 133 96 HOH HOH . Q 3 HOH E 16 134 97 HOH HOH . Q 3 HOH E 17 135 98 HOH HOH . Q 3 HOH E 18 136 99 HOH HOH . Q 3 HOH E 19 137 105 HOH HOH . R 3 HOH F 1 119 4 HOH HOH . R 3 HOH F 2 120 10 HOH HOH . R 3 HOH F 3 121 14 HOH HOH . R 3 HOH F 4 122 42 HOH HOH . R 3 HOH F 5 123 95 HOH HOH . R 3 HOH F 6 124 101 HOH HOH . R 3 HOH F 7 125 102 HOH HOH . R 3 HOH F 8 126 103 HOH HOH . R 3 HOH F 9 127 104 HOH HOH . R 3 HOH F 10 128 106 HOH HOH . R 3 HOH F 11 129 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . J 2 -46.412 -26.449 -28.135 1 92.12 ? PG ATP 200 D 1 HETATM 2 O O1G ATP . . . J 2 -45.303 -27.258 -28.798 1 90.9 ? O1G ATP 200 D 1 HETATM 3 O O2G ATP . . . J 2 -45.854 -25.686 -26.961 1 90.8 ? O2G ATP 200 D 1 HETATM 4 O O3G ATP . . . J 2 -47.059 -25.482 -29.089 1 90.22 ? O3G ATP 200 D 1 HETATM 5 P PB ATP . . . J 2 -48.604 -28.013 -28.395 1 81.97 ? PB ATP 200 D 1 HETATM 6 O O1B ATP . . . J 2 -49.737 -28.184 -27.356 1 82.29 ? O1B ATP 200 D 1 HETATM 7 O O2B ATP . . . J 2 -49.012 -27.149 -29.634 1 82.36 ? O2B ATP 200 D 1 HETATM 8 O O3B ATP . . . J 2 -47.523 -27.304 -27.534 1 87.76 ? O3B ATP 200 D 1 HETATM 9 P PA ATP . . . J 2 -47.349 -30.304 -27.777 1 65.32 ? PA ATP 200 D 1 HETATM 10 O O1A ATP . . . J 2 -47.931 -30.029 -26.419 1 65.22 ? O1A ATP 200 D 1 HETATM 11 O O2A ATP . . . J 2 -45.883 -29.933 -27.623 1 66.2 ? O2A ATP 200 D 1 HETATM 12 O O3A ATP . . . J 2 -48.037 -29.432 -28.845 1 76.32 ? O3A ATP 200 D 1 HETATM 13 O O5' ATP . . . J 2 -47.613 -31.879 -28.022 1 63.28 ? O5' ATP 200 D 1 HETATM 14 C C5' ATP . . . J 2 -46.623 -32.671 -27.434 1 57.11 ? C5' ATP 200 D 1 HETATM 15 C C4' ATP . . . J 2 -47.142 -33.939 -26.825 1 55.23 ? C4' ATP 200 D 1 HETATM 16 O O4' ATP . . . J 2 -47.149 -33.887 -25.381 1 53.26 ? O4' ATP 200 D 1 HETATM 17 C C3' ATP . . . J 2 -48.416 -34.553 -27.342 1 54.05 ? C3' ATP 200 D 1 HETATM 18 O O3' ATP . . . J 2 -48.172 -35.259 -28.554 1 55.53 ? O3' ATP 200 D 1 HETATM 19 C C2' ATP . . . J 2 -48.862 -35.41 -26.153 1 53.33 ? C2' ATP 200 D 1 HETATM 20 O O2' ATP . . . J 2 -48.233 -36.692 -26.182 1 52.82 ? O2' ATP 200 D 1 HETATM 21 C C1' ATP . . . J 2 -48.32 -34.638 -24.947 1 52.01 ? C1' ATP 200 D 1 HETATM 22 N N9 ATP . . . J 2 -49.147 -33.669 -24.239 1 50.28 ? N9 ATP 200 D 1 HETATM 23 C C8 ATP . . . J 2 -49.314 -32.342 -24.564 1 49.67 ? C8 ATP 200 D 1 HETATM 24 N N7 ATP . . . J 2 -50.082 -31.698 -23.729 1 50.13 ? N7 ATP 200 D 1 HETATM 25 C C5 ATP . . . J 2 -50.434 -32.651 -22.799 1 48.59 ? C5 ATP 200 D 1 HETATM 26 C C6 ATP . . . J 2 -51.24 -32.585 -21.654 1 48.21 ? C6 ATP 200 D 1 HETATM 27 N N6 ATP . . . J 2 -51.83 -31.394 -21.271 1 47.78 ? N6 ATP 200 D 1 HETATM 28 N N1 ATP . . . J 2 -51.41 -33.726 -20.908 1 47.85 ? N1 ATP 200 D 1 HETATM 29 C C2 ATP . . . J 2 -50.813 -34.895 -21.298 1 47.66 ? C2 ATP 200 D 1 HETATM 30 N N3 ATP . . . J 2 -50.02 -35.082 -22.397 1 48.73 ? N3 ATP 200 D 1 HETATM 31 C C4 ATP . . . J 2 -49.864 -33.911 -23.102 1 49.04 ? C4 ATP 200 D 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #