data_3TBH # _model_server_result.job_id I_QyB6hfVS5QYFfWJ1FcDA _model_server_result.datetime_utc '2024-11-04 22:38:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":335}' # _entry.id 3TBH # _exptl.entry_id 3TBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TBH _cell.length_a 115.217 _cell.length_b 62.44 _cell.length_c 43.538 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 50 A VAL 50 1_555 A N LLP 51 A LLP 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C LLP 51 A LLP 51 1_555 A N ASP 52 A ASP 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? metalc ? metalc1 A O VAL 141 A VAL 141 1_555 C NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc2 A O ASN 144 A ASN 144 1_555 C NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc3 A O ALA 147 A ALA 147 1_555 C NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TBH _atom_sites.fract_transf_matrix[1][1] 0.008679 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022968 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 335 235 NA NA . D 4 HOH A 1 336 1 HOH HOH . D 4 HOH A 2 337 2 HOH HOH . D 4 HOH A 3 338 3 HOH HOH . D 4 HOH A 4 339 4 HOH HOH . D 4 HOH A 5 340 5 HOH HOH . D 4 HOH A 6 341 6 HOH HOH . D 4 HOH A 7 342 7 HOH HOH . D 4 HOH A 8 343 8 HOH HOH . D 4 HOH A 9 344 9 HOH HOH . D 4 HOH A 10 345 10 HOH HOH . D 4 HOH A 11 346 11 HOH HOH . D 4 HOH A 12 347 12 HOH HOH . D 4 HOH A 13 348 13 HOH HOH . D 4 HOH A 14 349 14 HOH HOH . D 4 HOH A 15 350 15 HOH HOH . D 4 HOH A 16 351 16 HOH HOH . D 4 HOH A 17 352 17 HOH HOH . D 4 HOH A 18 353 18 HOH HOH . D 4 HOH A 19 354 19 HOH HOH . D 4 HOH A 20 355 20 HOH HOH . D 4 HOH A 21 356 21 HOH HOH . D 4 HOH A 22 357 22 HOH HOH . D 4 HOH A 23 358 23 HOH HOH . D 4 HOH A 24 359 24 HOH HOH . D 4 HOH A 25 360 25 HOH HOH . D 4 HOH A 26 361 26 HOH HOH . D 4 HOH A 27 362 27 HOH HOH . D 4 HOH A 28 363 28 HOH HOH . D 4 HOH A 29 364 29 HOH HOH . D 4 HOH A 30 365 30 HOH HOH . D 4 HOH A 31 366 31 HOH HOH . D 4 HOH A 32 367 32 HOH HOH . D 4 HOH A 33 368 34 HOH HOH . D 4 HOH A 34 369 35 HOH HOH . D 4 HOH A 35 370 36 HOH HOH . D 4 HOH A 36 371 37 HOH HOH . D 4 HOH A 37 372 38 HOH HOH . D 4 HOH A 38 373 39 HOH HOH . D 4 HOH A 39 374 40 HOH HOH . D 4 HOH A 40 375 41 HOH HOH . D 4 HOH A 41 376 42 HOH HOH . D 4 HOH A 42 377 43 HOH HOH . D 4 HOH A 43 378 45 HOH HOH . D 4 HOH A 44 379 46 HOH HOH . D 4 HOH A 45 380 47 HOH HOH . D 4 HOH A 46 381 48 HOH HOH . D 4 HOH A 47 382 49 HOH HOH . D 4 HOH A 48 383 50 HOH HOH . D 4 HOH A 49 384 51 HOH HOH . D 4 HOH A 50 385 52 HOH HOH . D 4 HOH A 51 386 53 HOH HOH . D 4 HOH A 52 387 54 HOH HOH . D 4 HOH A 53 388 55 HOH HOH . D 4 HOH A 54 389 56 HOH HOH . D 4 HOH A 55 390 57 HOH HOH . D 4 HOH A 56 391 58 HOH HOH . D 4 HOH A 57 392 59 HOH HOH . D 4 HOH A 58 393 60 HOH HOH . D 4 HOH A 59 394 61 HOH HOH . D 4 HOH A 60 395 62 HOH HOH . D 4 HOH A 61 396 63 HOH HOH . D 4 HOH A 62 397 64 HOH HOH . D 4 HOH A 63 398 65 HOH HOH . D 4 HOH A 64 399 66 HOH HOH . D 4 HOH A 65 400 67 HOH HOH . D 4 HOH A 66 401 68 HOH HOH . D 4 HOH A 67 402 69 HOH HOH . D 4 HOH A 68 403 70 HOH HOH . D 4 HOH A 69 404 71 HOH HOH . D 4 HOH A 70 405 72 HOH HOH . D 4 HOH A 71 406 73 HOH HOH . D 4 HOH A 72 407 74 HOH HOH . D 4 HOH A 73 408 75 HOH HOH . D 4 HOH A 74 409 76 HOH HOH . D 4 HOH A 75 410 77 HOH HOH . D 4 HOH A 76 411 78 HOH HOH . D 4 HOH A 77 412 79 HOH HOH . D 4 HOH A 78 413 80 HOH HOH . D 4 HOH A 79 414 82 HOH HOH . D 4 HOH A 80 415 83 HOH HOH . D 4 HOH A 81 416 84 HOH HOH . D 4 HOH A 82 417 85 HOH HOH . D 4 HOH A 83 418 86 HOH HOH . D 4 HOH A 84 419 87 HOH HOH . D 4 HOH A 85 420 88 HOH HOH . D 4 HOH A 86 421 89 HOH HOH . D 4 HOH A 87 422 90 HOH HOH . D 4 HOH A 88 423 91 HOH HOH . D 4 HOH A 89 424 92 HOH HOH . D 4 HOH A 90 425 93 HOH HOH . D 4 HOH A 91 426 95 HOH HOH . D 4 HOH A 92 427 96 HOH HOH . D 4 HOH A 93 428 97 HOH HOH . D 4 HOH A 94 429 98 HOH HOH . D 4 HOH A 95 430 99 HOH HOH . D 4 HOH A 96 431 100 HOH HOH . D 4 HOH A 97 432 101 HOH HOH . D 4 HOH A 98 433 102 HOH HOH . D 4 HOH A 99 434 103 HOH HOH . D 4 HOH A 100 435 104 HOH HOH . D 4 HOH A 101 436 105 HOH HOH . D 4 HOH A 102 437 106 HOH HOH . D 4 HOH A 103 438 107 HOH HOH . D 4 HOH A 104 439 108 HOH HOH . D 4 HOH A 105 440 109 HOH HOH . D 4 HOH A 106 441 110 HOH HOH . D 4 HOH A 107 442 111 HOH HOH . D 4 HOH A 108 443 112 HOH HOH . D 4 HOH A 109 444 113 HOH HOH . D 4 HOH A 110 445 114 HOH HOH . D 4 HOH A 111 446 115 HOH HOH . D 4 HOH A 112 447 116 HOH HOH . D 4 HOH A 113 448 117 HOH HOH . D 4 HOH A 114 449 118 HOH HOH . D 4 HOH A 115 450 119 HOH HOH . D 4 HOH A 116 451 120 HOH HOH . D 4 HOH A 117 452 121 HOH HOH . D 4 HOH A 118 453 122 HOH HOH . D 4 HOH A 119 454 123 HOH HOH . D 4 HOH A 120 455 125 HOH HOH . D 4 HOH A 121 456 126 HOH HOH . D 4 HOH A 122 457 127 HOH HOH . D 4 HOH A 123 458 128 HOH HOH . D 4 HOH A 124 459 129 HOH HOH . D 4 HOH A 125 460 130 HOH HOH . D 4 HOH A 126 461 131 HOH HOH . D 4 HOH A 127 462 132 HOH HOH . D 4 HOH A 128 463 133 HOH HOH . D 4 HOH A 129 464 134 HOH HOH . D 4 HOH A 130 465 135 HOH HOH . D 4 HOH A 131 466 136 HOH HOH . D 4 HOH A 132 467 137 HOH HOH . D 4 HOH A 133 468 138 HOH HOH . D 4 HOH A 134 469 139 HOH HOH . D 4 HOH A 135 470 140 HOH HOH . D 4 HOH A 136 471 141 HOH HOH . D 4 HOH A 137 472 142 HOH HOH . D 4 HOH A 138 473 143 HOH HOH . D 4 HOH A 139 474 144 HOH HOH . D 4 HOH A 140 475 145 HOH HOH . D 4 HOH A 141 476 146 HOH HOH . D 4 HOH A 142 477 147 HOH HOH . D 4 HOH A 143 478 148 HOH HOH . D 4 HOH A 144 479 149 HOH HOH . D 4 HOH A 145 480 150 HOH HOH . D 4 HOH A 146 481 151 HOH HOH . D 4 HOH A 147 482 152 HOH HOH . D 4 HOH A 148 483 153 HOH HOH . D 4 HOH A 149 484 154 HOH HOH . D 4 HOH A 150 485 155 HOH HOH . D 4 HOH A 151 486 156 HOH HOH . D 4 HOH A 152 487 157 HOH HOH . D 4 HOH A 153 488 158 HOH HOH . D 4 HOH A 154 489 159 HOH HOH . D 4 HOH A 155 490 160 HOH HOH . D 4 HOH A 156 491 161 HOH HOH . D 4 HOH A 157 492 163 HOH HOH . D 4 HOH A 158 493 164 HOH HOH . D 4 HOH A 159 494 165 HOH HOH . D 4 HOH A 160 495 166 HOH HOH . D 4 HOH A 161 496 167 HOH HOH . D 4 HOH A 162 497 168 HOH HOH . D 4 HOH A 163 498 169 HOH HOH . D 4 HOH A 164 499 170 HOH HOH . D 4 HOH A 165 500 171 HOH HOH . D 4 HOH A 166 501 172 HOH HOH . D 4 HOH A 167 502 174 HOH HOH . D 4 HOH A 168 503 176 HOH HOH . D 4 HOH A 169 504 177 HOH HOH . D 4 HOH A 170 505 178 HOH HOH . D 4 HOH A 171 506 179 HOH HOH . D 4 HOH A 172 507 200 HOH HOH . D 4 HOH A 173 508 201 HOH HOH . D 4 HOH A 174 509 202 HOH HOH . D 4 HOH A 175 510 203 HOH HOH . D 4 HOH A 176 511 204 HOH HOH . D 4 HOH A 177 512 205 HOH HOH . D 4 HOH A 178 513 206 HOH HOH . D 4 HOH A 179 514 207 HOH HOH . D 4 HOH A 180 515 208 HOH HOH . D 4 HOH A 181 516 209 HOH HOH . D 4 HOH A 182 517 210 HOH HOH . D 4 HOH A 183 518 211 HOH HOH . D 4 HOH A 184 519 212 HOH HOH . D 4 HOH A 185 520 213 HOH HOH . D 4 HOH A 186 521 214 HOH HOH . D 4 HOH A 187 522 215 HOH HOH . D 4 HOH A 188 523 216 HOH HOH . D 4 HOH A 189 524 217 HOH HOH . D 4 HOH A 190 525 218 HOH HOH . D 4 HOH A 191 526 219 HOH HOH . D 4 HOH A 192 527 220 HOH HOH . D 4 HOH A 193 528 221 HOH HOH . D 4 HOH A 194 529 222 HOH HOH . D 4 HOH A 195 530 223 HOH HOH . D 4 HOH A 196 531 224 HOH HOH . D 4 HOH A 197 532 225 HOH HOH . D 4 HOH A 198 533 226 HOH HOH . D 4 HOH A 199 534 227 HOH HOH . D 4 HOH A 200 535 228 HOH HOH . D 4 HOH A 201 536 229 HOH HOH . D 4 HOH A 202 537 230 HOH HOH . D 4 HOH A 203 538 231 HOH HOH . D 4 HOH A 204 539 232 HOH HOH . D 4 HOH A 205 540 233 HOH HOH . D 4 HOH A 206 541 234 HOH HOH . E 4 HOH B 1 33 33 HOH HOH . E 4 HOH B 2 44 44 HOH HOH . E 4 HOH B 3 81 81 HOH HOH . E 4 HOH B 4 124 124 HOH HOH . E 4 HOH B 5 162 162 HOH HOH . E 4 HOH B 6 173 173 HOH HOH . E 4 HOH B 7 175 175 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 21.712 _atom_site.Cartn_y -25.8 _atom_site.Cartn_z 1.985 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 335 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #