data_3TBS
#
_model_server_result.job_id            S6HRvKnzDXletBa75gbUTg 
_model_server_result.datetime_utc      '2024-11-02 05:28:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tbs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":340}' 
#
_entry.id    3TBS 
#
_exptl.entry_id    3TBS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          128.15 
_cell.angle_gamma         90 
_cell.entry_id            3TBS 
_cell.length_a            117.84 
_cell.length_b            125.12 
_cell.length_c            101.32 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TBS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,H,K,L,M 1 1 
D,E,F,I,J,N,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 D SG CYS 101 D CYS 101 1_555 D SG CYS 164 D CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf5 D SG CYS 203 D CYS 203 1_555 D SG CYS 259 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf6 E SG CYS 25 E CYS 25 1_555 E SG CYS 80 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3TBS 
_atom_sites.fract_transf_matrix[1][1]    0.008486 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006666 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007992 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012551 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 SO4 A 1 339 2 SO4 SO4 . 
H 5 GOL A 1 340 2 GOL GOL . 
I 4 SO4 D 1 339 1 SO4 SO4 . 
J 5 GOL D 1 340 1 GOL GOL . 
K 6 HOH A 1 341 5 HOH HOH . 
K 6 HOH A 2 342 6 HOH HOH . 
K 6 HOH A 3 343 7 HOH HOH . 
K 6 HOH A 4 344 12 HOH HOH . 
K 6 HOH A 5 345 15 HOH HOH . 
K 6 HOH A 6 346 17 HOH HOH . 
K 6 HOH A 7 347 24 HOH HOH . 
K 6 HOH A 8 348 27 HOH HOH . 
K 6 HOH A 9 349 40 HOH HOH . 
K 6 HOH A 10 350 43 HOH HOH . 
K 6 HOH A 11 351 57 HOH HOH . 
K 6 HOH A 12 352 58 HOH HOH . 
K 6 HOH A 13 353 61 HOH HOH . 
K 6 HOH A 14 354 66 HOH HOH . 
K 6 HOH A 15 355 68 HOH HOH . 
K 6 HOH A 16 356 75 HOH HOH . 
K 6 HOH A 17 357 79 HOH HOH . 
K 6 HOH A 18 358 88 HOH HOH . 
K 6 HOH A 19 359 89 HOH HOH . 
K 6 HOH A 20 360 91 HOH HOH . 
K 6 HOH A 21 361 92 HOH HOH . 
K 6 HOH A 22 362 102 HOH HOH . 
K 6 HOH A 23 363 104 HOH HOH . 
K 6 HOH A 24 364 107 HOH HOH . 
K 6 HOH A 25 365 111 HOH HOH . 
K 6 HOH A 26 366 112 HOH HOH . 
K 6 HOH A 27 367 115 HOH HOH . 
K 6 HOH A 28 368 116 HOH HOH . 
K 6 HOH A 29 369 118 HOH HOH . 
K 6 HOH A 30 370 120 HOH HOH . 
K 6 HOH A 31 371 123 HOH HOH . 
K 6 HOH A 32 372 130 HOH HOH . 
K 6 HOH A 33 373 131 HOH HOH . 
K 6 HOH A 34 374 132 HOH HOH . 
K 6 HOH A 35 375 133 HOH HOH . 
K 6 HOH A 36 376 135 HOH HOH . 
K 6 HOH A 37 377 137 HOH HOH . 
K 6 HOH A 38 378 141 HOH HOH . 
K 6 HOH A 39 379 143 HOH HOH . 
K 6 HOH A 40 380 146 HOH HOH . 
K 6 HOH A 41 381 148 HOH HOH . 
K 6 HOH A 42 382 149 HOH HOH . 
K 6 HOH A 43 383 153 HOH HOH . 
K 6 HOH A 44 384 154 HOH HOH . 
K 6 HOH A 45 385 155 HOH HOH . 
K 6 HOH A 46 386 157 HOH HOH . 
L 6 HOH B 1 100 2 HOH HOH . 
L 6 HOH B 2 101 101 HOH HOH . 
L 6 HOH B 3 102 8 HOH HOH . 
L 6 HOH B 4 103 13 HOH HOH . 
L 6 HOH B 5 104 18 HOH HOH . 
L 6 HOH B 6 105 21 HOH HOH . 
L 6 HOH B 7 106 23 HOH HOH . 
L 6 HOH B 8 107 44 HOH HOH . 
L 6 HOH B 9 108 48 HOH HOH . 
L 6 HOH B 10 109 60 HOH HOH . 
L 6 HOH B 11 110 110 HOH HOH . 
L 6 HOH B 12 111 71 HOH HOH . 
L 6 HOH B 13 112 77 HOH HOH . 
L 6 HOH B 14 113 86 HOH HOH . 
L 6 HOH B 15 114 87 HOH HOH . 
L 6 HOH B 16 115 94 HOH HOH . 
L 6 HOH B 17 117 117 HOH HOH . 
L 6 HOH B 18 125 125 HOH HOH . 
L 6 HOH B 19 126 126 HOH HOH . 
L 6 HOH B 20 134 134 HOH HOH . 
L 6 HOH B 21 138 138 HOH HOH . 
L 6 HOH B 22 144 144 HOH HOH . 
L 6 HOH B 23 145 145 HOH HOH . 
L 6 HOH B 24 151 151 HOH HOH . 
L 6 HOH B 25 156 156 HOH HOH . 
L 6 HOH B 26 159 159 HOH HOH . 
L 6 HOH B 27 160 160 HOH HOH . 
M 6 HOH C 1 11 11 HOH HOH . 
M 6 HOH C 2 31 31 HOH HOH . 
M 6 HOH C 3 67 67 HOH HOH . 
M 6 HOH C 4 80 80 HOH HOH . 
M 6 HOH C 5 97 97 HOH HOH . 
N 6 HOH D 1 341 9 HOH HOH . 
N 6 HOH D 2 342 10 HOH HOH . 
N 6 HOH D 3 343 14 HOH HOH . 
N 6 HOH D 4 344 20 HOH HOH . 
N 6 HOH D 5 345 22 HOH HOH . 
N 6 HOH D 6 346 25 HOH HOH . 
N 6 HOH D 7 347 26 HOH HOH . 
N 6 HOH D 8 348 28 HOH HOH . 
N 6 HOH D 9 349 29 HOH HOH . 
N 6 HOH D 10 350 33 HOH HOH . 
N 6 HOH D 11 351 35 HOH HOH . 
N 6 HOH D 12 352 38 HOH HOH . 
N 6 HOH D 13 353 39 HOH HOH . 
N 6 HOH D 14 354 42 HOH HOH . 
N 6 HOH D 15 355 49 HOH HOH . 
N 6 HOH D 16 356 52 HOH HOH . 
N 6 HOH D 17 357 53 HOH HOH . 
N 6 HOH D 18 358 55 HOH HOH . 
N 6 HOH D 19 359 56 HOH HOH . 
N 6 HOH D 20 360 62 HOH HOH . 
N 6 HOH D 21 361 63 HOH HOH . 
N 6 HOH D 22 362 65 HOH HOH . 
N 6 HOH D 23 363 72 HOH HOH . 
N 6 HOH D 24 364 73 HOH HOH . 
N 6 HOH D 25 365 78 HOH HOH . 
N 6 HOH D 26 366 84 HOH HOH . 
N 6 HOH D 27 367 85 HOH HOH . 
N 6 HOH D 28 368 93 HOH HOH . 
N 6 HOH D 29 369 96 HOH HOH . 
N 6 HOH D 30 370 98 HOH HOH . 
N 6 HOH D 31 371 99 HOH HOH . 
N 6 HOH D 32 372 100 HOH HOH . 
N 6 HOH D 33 373 103 HOH HOH . 
N 6 HOH D 34 374 106 HOH HOH . 
N 6 HOH D 35 375 108 HOH HOH . 
N 6 HOH D 36 376 114 HOH HOH . 
N 6 HOH D 37 377 124 HOH HOH . 
N 6 HOH D 38 378 127 HOH HOH . 
N 6 HOH D 39 379 142 HOH HOH . 
N 6 HOH D 40 380 147 HOH HOH . 
N 6 HOH D 41 381 150 HOH HOH . 
O 6 HOH E 1 100 3 HOH HOH . 
O 6 HOH E 2 101 4 HOH HOH . 
O 6 HOH E 3 102 16 HOH HOH . 
O 6 HOH E 4 103 19 HOH HOH . 
O 6 HOH E 5 104 32 HOH HOH . 
O 6 HOH E 6 105 34 HOH HOH . 
O 6 HOH E 7 106 36 HOH HOH . 
O 6 HOH E 8 107 37 HOH HOH . 
O 6 HOH E 9 108 45 HOH HOH . 
O 6 HOH E 10 109 46 HOH HOH . 
O 6 HOH E 11 110 47 HOH HOH . 
O 6 HOH E 12 111 59 HOH HOH . 
O 6 HOH E 13 112 64 HOH HOH . 
O 6 HOH E 14 113 113 HOH HOH . 
O 6 HOH E 15 114 69 HOH HOH . 
O 6 HOH E 16 115 70 HOH HOH . 
O 6 HOH E 17 116 74 HOH HOH . 
O 6 HOH E 18 117 83 HOH HOH . 
O 6 HOH E 19 118 95 HOH HOH . 
O 6 HOH E 20 121 121 HOH HOH . 
O 6 HOH E 21 122 122 HOH HOH . 
O 6 HOH E 22 136 136 HOH HOH . 
O 6 HOH E 23 139 139 HOH HOH . 
O 6 HOH E 24 140 140 HOH HOH . 
O 6 HOH E 25 152 152 HOH HOH . 
P 6 HOH F 1 54 54 HOH HOH . 
P 6 HOH F 2 119 119 HOH HOH . 
P 6 HOH F 3 129 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 5 -17.636 32.358 -52.825 1 83.74 ? C1 GOL 340 D 1 
HETATM 2 O O1 GOL . . . J 5 -16.972 33.486 -53.355 1 83.42 ? O1 GOL 340 D 1 
HETATM 3 C C2 GOL . . . J 5 -19.126 32.368 -53.196 1 83.62 ? C2 GOL 340 D 1 
HETATM 4 O O2 GOL . . . J 5 -19.264 31.993 -54.558 1 84.07 ? O2 GOL 340 D 1 
HETATM 5 C C3 GOL . . . J 5 -19.948 31.436 -52.28 1 82.52 ? C3 GOL 340 D 1 
HETATM 6 O O3 GOL . . . J 5 -20.664 32.162 -51.295 1 80.52 ? O3 GOL 340 D 1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           6 
#