data_3TCT # _model_server_result.job_id 85WW7bNEOwf1cUzsMhtqhQ _model_server_result.datetime_utc '2024-11-22 03:18:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tct # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":128}' # _entry.id 3TCT # _exptl.entry_id 3TCT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 308.116 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TCT _cell.length_a 42.749 _cell.length_b 84.994 _cell.length_c 64.334 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TCT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H7 Cl2 N O3' _chem_comp.formula_weight 308.116 _chem_comp.id 3MI _chem_comp.mon_nstd_flag . _chem_comp.name '2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Tafamidis # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAM OAA 3MI sing 1 n n OAA HOAA 3MI sing 2 n n OAB CAM 3MI doub 3 n n CAF CAE 3MI doub 4 n y CAP CAE 3MI sing 5 n y CAE HAE 3MI sing 6 n n CAS CAF 3MI sing 7 n y CAF HAF 3MI sing 8 n n CAG CAN 3MI doub 9 n y CAG CAO 3MI sing 10 n y CAG HAG 3MI sing 11 n n CAN CAH 3MI sing 12 n y CAH CAQ 3MI doub 13 n y CAH HAH 3MI sing 14 n n CAO CAI 3MI doub 15 n y CAI CAQ 3MI sing 16 n y CAI HAI 3MI sing 17 n n CAT CAJ 3MI sing 18 n y CAJ CAP 3MI doub 19 n y CAJ HAJ 3MI sing 20 n n CAR NAK 3MI doub 21 n y NAK CAS 3MI sing 22 n y CAR OAL 3MI sing 23 n y OAL CAT 3MI sing 24 n y CAP CAM 3MI sing 25 n n CLC CAN 3MI sing 26 n n CLD CAO 3MI sing 27 n n CAQ CAR 3MI sing 28 n y CAT CAS 3MI doub 29 n y # _atom_sites.entry_id 3TCT _atom_sites.fract_transf_matrix[1][1] 0.023392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3MI A 1 128 128 3MI 3MI . D 2 3MI B 1 128 128 3MI 3MI . E 3 HOH A 1 129 129 HOH HOH . E 3 HOH A 2 130 130 HOH HOH . E 3 HOH A 3 131 131 HOH HOH . E 3 HOH A 4 132 132 HOH HOH . E 3 HOH A 5 133 133 HOH HOH . E 3 HOH A 6 134 134 HOH HOH . E 3 HOH A 7 135 135 HOH HOH . E 3 HOH A 8 136 136 HOH HOH . E 3 HOH A 9 137 137 HOH HOH . E 3 HOH A 10 138 138 HOH HOH . E 3 HOH A 11 139 139 HOH HOH . E 3 HOH A 12 140 140 HOH HOH . E 3 HOH A 13 141 141 HOH HOH . E 3 HOH A 14 142 142 HOH HOH . E 3 HOH A 15 143 143 HOH HOH . E 3 HOH A 16 144 144 HOH HOH . E 3 HOH A 17 145 145 HOH HOH . E 3 HOH A 18 146 146 HOH HOH . E 3 HOH A 19 147 147 HOH HOH . E 3 HOH A 20 148 148 HOH HOH . E 3 HOH A 21 149 149 HOH HOH . E 3 HOH A 22 150 150 HOH HOH . E 3 HOH A 23 151 151 HOH HOH . E 3 HOH A 24 152 152 HOH HOH . E 3 HOH A 25 153 153 HOH HOH . E 3 HOH A 26 154 154 HOH HOH . E 3 HOH A 27 155 155 HOH HOH . E 3 HOH A 28 156 156 HOH HOH . E 3 HOH A 29 157 157 HOH HOH . E 3 HOH A 30 158 158 HOH HOH . E 3 HOH A 31 159 159 HOH HOH . E 3 HOH A 32 160 160 HOH HOH . E 3 HOH A 33 161 161 HOH HOH . E 3 HOH A 34 162 162 HOH HOH . E 3 HOH A 35 163 163 HOH HOH . E 3 HOH A 36 164 164 HOH HOH . E 3 HOH A 37 165 165 HOH HOH . E 3 HOH A 38 166 166 HOH HOH . E 3 HOH A 39 167 167 HOH HOH . E 3 HOH A 40 168 168 HOH HOH . E 3 HOH A 41 169 169 HOH HOH . E 3 HOH A 42 170 170 HOH HOH . E 3 HOH A 43 171 171 HOH HOH . E 3 HOH A 44 172 172 HOH HOH . E 3 HOH A 45 173 173 HOH HOH . E 3 HOH A 46 174 174 HOH HOH . E 3 HOH A 47 175 175 HOH HOH . E 3 HOH A 48 176 176 HOH HOH . E 3 HOH A 49 177 177 HOH HOH . E 3 HOH A 50 178 178 HOH HOH . E 3 HOH A 51 179 179 HOH HOH . E 3 HOH A 52 180 180 HOH HOH . E 3 HOH A 53 181 181 HOH HOH . E 3 HOH A 54 182 182 HOH HOH . E 3 HOH A 55 183 183 HOH HOH . E 3 HOH A 56 184 184 HOH HOH . E 3 HOH A 57 185 185 HOH HOH . E 3 HOH A 58 186 186 HOH HOH . E 3 HOH A 59 187 187 HOH HOH . E 3 HOH A 60 188 188 HOH HOH . E 3 HOH A 61 189 189 HOH HOH . E 3 HOH A 62 190 190 HOH HOH . E 3 HOH A 63 191 191 HOH HOH . E 3 HOH A 64 192 192 HOH HOH . E 3 HOH A 65 193 193 HOH HOH . E 3 HOH A 66 194 194 HOH HOH . E 3 HOH A 67 195 195 HOH HOH . E 3 HOH A 68 196 196 HOH HOH . E 3 HOH A 69 197 197 HOH HOH . E 3 HOH A 70 198 198 HOH HOH . E 3 HOH A 71 199 199 HOH HOH . E 3 HOH A 72 200 200 HOH HOH . E 3 HOH A 73 201 201 HOH HOH . E 3 HOH A 74 202 202 HOH HOH . F 3 HOH B 1 129 129 HOH HOH . F 3 HOH B 2 130 130 HOH HOH . F 3 HOH B 3 131 131 HOH HOH . F 3 HOH B 4 132 132 HOH HOH . F 3 HOH B 5 133 133 HOH HOH . F 3 HOH B 6 134 134 HOH HOH . F 3 HOH B 7 135 135 HOH HOH . F 3 HOH B 8 136 136 HOH HOH . F 3 HOH B 9 137 137 HOH HOH . F 3 HOH B 10 138 138 HOH HOH . F 3 HOH B 11 139 139 HOH HOH . F 3 HOH B 12 140 140 HOH HOH . F 3 HOH B 13 141 141 HOH HOH . F 3 HOH B 14 142 142 HOH HOH . F 3 HOH B 15 143 143 HOH HOH . F 3 HOH B 16 144 144 HOH HOH . F 3 HOH B 17 145 145 HOH HOH . F 3 HOH B 18 146 146 HOH HOH . F 3 HOH B 19 147 147 HOH HOH . F 3 HOH B 20 148 148 HOH HOH . F 3 HOH B 21 149 149 HOH HOH . F 3 HOH B 22 150 150 HOH HOH . F 3 HOH B 23 151 151 HOH HOH . F 3 HOH B 24 152 152 HOH HOH . F 3 HOH B 25 153 153 HOH HOH . F 3 HOH B 26 154 154 HOH HOH . F 3 HOH B 27 155 155 HOH HOH . F 3 HOH B 28 156 156 HOH HOH . F 3 HOH B 29 157 157 HOH HOH . F 3 HOH B 30 158 158 HOH HOH . F 3 HOH B 31 159 159 HOH HOH . F 3 HOH B 32 160 160 HOH HOH . F 3 HOH B 33 161 161 HOH HOH . F 3 HOH B 34 162 162 HOH HOH . F 3 HOH B 35 163 163 HOH HOH . F 3 HOH B 36 164 164 HOH HOH . F 3 HOH B 37 165 165 HOH HOH . F 3 HOH B 38 166 166 HOH HOH . F 3 HOH B 39 167 167 HOH HOH . F 3 HOH B 40 168 168 HOH HOH . F 3 HOH B 41 169 169 HOH HOH . F 3 HOH B 42 170 170 HOH HOH . F 3 HOH B 43 171 171 HOH HOH . F 3 HOH B 44 172 172 HOH HOH . F 3 HOH B 45 173 173 HOH HOH . F 3 HOH B 46 174 174 HOH HOH . F 3 HOH B 47 175 175 HOH HOH . F 3 HOH B 48 176 176 HOH HOH . F 3 HOH B 49 177 177 HOH HOH . F 3 HOH B 50 178 178 HOH HOH . F 3 HOH B 51 179 179 HOH HOH . F 3 HOH B 52 180 180 HOH HOH . F 3 HOH B 53 181 181 HOH HOH . F 3 HOH B 54 182 182 HOH HOH . F 3 HOH B 55 183 183 HOH HOH . F 3 HOH B 56 184 184 HOH HOH . F 3 HOH B 57 185 185 HOH HOH . F 3 HOH B 58 186 186 HOH HOH . F 3 HOH B 59 187 187 HOH HOH . F 3 HOH B 60 188 188 HOH HOH . F 3 HOH B 61 189 189 HOH HOH . F 3 HOH B 62 190 190 HOH HOH . F 3 HOH B 63 191 191 HOH HOH . F 3 HOH B 64 192 192 HOH HOH . F 3 HOH B 65 193 193 HOH HOH . F 3 HOH B 66 194 194 HOH HOH . F 3 HOH B 67 195 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA 3MI . A . D 2 0.585 1.175 -32.407 0.25 28.23 ? OAA 3MI 128 B 1 HETATM 2 O OAA 3MI . B . D 2 -0.585 -1.175 -32.407 0.25 28.23 ? OAA 3MI 128 B 1 HETATM 3 O OAB 3MI . A . D 2 1.854 2.536 -31.24 0.25 24.75 ? OAB 3MI 128 B 1 HETATM 4 O OAB 3MI . B . D 2 -1.854 -2.536 -31.24 0.25 24.75 ? OAB 3MI 128 B 1 HETATM 5 C CAE 3MI . A . D 2 0.058 -0.382 -30.131 0.25 17.22 ? CAE 3MI 128 B 1 HETATM 6 C CAE 3MI . B . D 2 -0.058 0.382 -30.131 0.25 17.22 ? CAE 3MI 128 B 1 HETATM 7 C CAF 3MI . A . D 2 -0.308 -1.09 -28.998 0.25 17.47 ? CAF 3MI 128 B 1 HETATM 8 C CAF 3MI . B . D 2 0.308 1.09 -28.998 0.25 17.47 ? CAF 3MI 128 B 1 HETATM 9 C CAG 3MI . A . D 2 -0.056 0.025 -21.507 0.25 12.83 ? CAG 3MI 128 B 1 HETATM 10 C CAG 3MI . B . D 2 0.056 -0.025 -21.507 0.25 12.83 ? CAG 3MI 128 B 1 HETATM 11 C CAH 3MI . A . D 2 0.13 1.182 -23.59 0.25 15.53 ? CAH 3MI 128 B 1 HETATM 12 C CAH 3MI . B . D 2 -0.13 -1.182 -23.59 0.25 15.53 ? CAH 3MI 128 B 1 HETATM 13 C CAI 3MI . A . D 2 -0.199 -1.167 -23.543 0.25 14.4 ? CAI 3MI 128 B 1 HETATM 14 C CAI 3MI . B . D 2 0.199 1.167 -23.543 0.25 14.4 ? CAI 3MI 128 B 1 HETATM 15 C CAJ 3MI . A . D 2 0.864 1.458 -28.819 0.25 15.32 ? CAJ 3MI 128 B 1 HETATM 16 C CAJ 3MI . B . D 2 -0.864 -1.458 -28.819 0.25 15.32 ? CAJ 3MI 128 B 1 HETATM 17 N NAK 3MI . A . D 2 -0.351 -0.95 -26.534 0.25 15.47 ? NAK 3MI 128 B 1 HETATM 18 N NAK 3MI . B . D 2 0.351 0.95 -26.534 0.25 15.47 ? NAK 3MI 128 B 1 HETATM 19 O OAL 3MI . A . D 2 0.549 1.079 -26.353 0.25 15.53 ? OAL 3MI 128 B 1 HETATM 20 O OAL 3MI . B . D 2 -0.549 -1.079 -26.353 0.25 15.53 ? OAL 3MI 128 B 1 HETATM 21 C CAM 3MI . A . D 2 1.042 1.598 -31.33 0.25 21.7 ? CAM 3MI 128 B 1 HETATM 22 C CAM 3MI . B . D 2 -1.042 -1.598 -31.33 0.25 21.7 ? CAM 3MI 128 B 1 HETATM 23 C CAN 3MI . A . D 2 0.117 1.174 -22.232 0.25 12.44 ? CAN 3MI 128 B 1 HETATM 24 C CAN 3MI . B . D 2 -0.117 -1.174 -22.232 0.25 12.44 ? CAN 3MI 128 B 1 HETATM 25 C CAO 3MI . A . D 2 -0.215 -1.152 -22.189 0.25 12.37 ? CAO 3MI 128 B 1 HETATM 26 C CAO 3MI . B . D 2 0.215 1.152 -22.189 0.25 12.37 ? CAO 3MI 128 B 1 HETATM 27 C CAP 3MI . A . D 2 0.655 0.858 -30.049 0.25 18.14 ? CAP 3MI 128 B 1 HETATM 28 C CAP 3MI . B . D 2 -0.655 -0.858 -30.049 0.25 18.14 ? CAP 3MI 128 B 1 HETATM 29 C CAQ 3MI . A . D 2 -0.03 -0.003 -24.276 0.25 13.21 ? CAQ 3MI 128 B 1 HETATM 30 C CAQ 3MI . B . D 2 0.03 0.003 -24.276 0.25 13.21 ? CAQ 3MI 128 B 1 HETATM 31 C CAR 3MI . A . D 2 0.017 0.004 -25.665 0.25 14.13 ? CAR 3MI 128 B 1 HETATM 32 C CAR 3MI . B . D 2 -0.017 -0.004 -25.665 0.25 14.13 ? CAR 3MI 128 B 1 HETATM 33 C CAS 3MI . A . D 2 -0.093 -0.498 -27.777 0.25 15.75 ? CAS 3MI 128 B 1 HETATM 34 C CAS 3MI . B . D 2 0.093 0.498 -27.777 0.25 15.75 ? CAS 3MI 128 B 1 HETATM 35 C CAT 3MI . A . D 2 0.477 0.761 -27.688 0.25 16.31 ? CAT 3MI 128 B 1 HETATM 36 C CAT 3MI . B . D 2 -0.477 -0.761 -27.688 0.25 16.31 ? CAT 3MI 128 B 1 HETATM 37 CL CLC 3MI . A . D 2 0.281 2.67 -21.381 0.25 13.97 ? CLC 3MI 128 B 1 HETATM 38 CL CLC 3MI . B . D 2 -0.281 -2.67 -21.381 0.25 13.97 ? CLC 3MI 128 B 1 HETATM 39 CL CLD 3MI . A . D 2 -0.396 -2.66 -21.342 0.25 14.37 ? CLD 3MI 128 B 1 HETATM 40 CL CLD 3MI . B . D 2 0.396 2.66 -21.342 0.25 14.37 ? CLD 3MI 128 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #