data_3TCZ
#
_model_server_result.job_id            4WaD_XNNpAYv1uGqG2oInw 
_model_server_result.datetime_utc      '2025-01-10 11:33:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tcz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    3TCZ 
#
_exptl.entry_id    3TCZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N~2~-({(1R,2Z)-2-[(2R)-2-(formylamino)-3-(phosphonooxy)propylidene]cyclopentyl}carbonyl)-L-argininamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3TCZ 
_cell.length_a            69.389 
_cell.length_b            69.389 
_cell.length_c            79.607 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TCZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C16 H29 N6 O7 P' 
_chem_comp.formula_weight    448.411 
_chem_comp.id                R2Z 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N~2~-({(1R,2Z)-2-[(2R)-2-(formylamino)-3-(phosphonooxy)propylidene]cyclopentyl}carbonyl)-L-argininamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4P P R2Z sing 334 n n 
O2P P R2Z doub 335 n n 
O1P P R2Z sing 336 n n 
P O3P R2Z sing 337 n n 
C22 N0 R2Z sing 338 n n 
N0 C20 R2Z sing 339 n n 
N0 HN0 R2Z sing 340 n n 
O0 C22 R2Z doub 341 n n 
C1 C20 R2Z sing 342 n n 
C1 C2 R2Z doub 343 z n 
C1 H1 R2Z sing 344 n n 
C9 N1 R2Z sing 345 n n 
N1 C7 R2Z sing 346 n n 
N1 HN1 R2Z sing 347 n n 
C6 C2 R2Z sing 348 n n 
C2 C3 R2Z sing 349 n n 
C10 N2 R2Z sing 350 n n 
N2 HN2 R2Z sing 351 n n 
N2 HN2A R2Z sing 352 n n 
C7 O2 R2Z doub 353 n n 
C7 C3 R2Z sing 354 n n 
C3 C4 R2Z sing 355 n n 
C3 H3 R2Z sing 356 n n 
C14 N3 R2Z sing 357 n n 
N3 C13 R2Z sing 358 n n 
N3 HN3 R2Z sing 359 n n 
C10 O3 R2Z doub 360 n n 
C5 C4 R2Z sing 361 n n 
C4 H4 R2Z sing 362 n n 
C4 H4A R2Z sing 363 n n 
N4 C14 R2Z doub 364 n n 
N4 HN4 R2Z sing 365 n n 
C6 C5 R2Z sing 366 n n 
C5 H5 R2Z sing 367 n n 
C5 H5A R2Z sing 368 n n 
N5 C14 R2Z sing 369 n n 
N5 HN5 R2Z sing 370 n n 
N5 HN5A R2Z sing 371 n n 
C6 H6 R2Z sing 372 n n 
C6 H6A R2Z sing 373 n n 
C11 C9 R2Z sing 374 n n 
C9 C10 R2Z sing 375 n n 
C9 H9 R2Z sing 376 n n 
C12 C11 R2Z sing 377 n n 
C11 H11 R2Z sing 378 n n 
C11 H11A R2Z sing 379 n n 
C13 C12 R2Z sing 380 n n 
C12 H12 R2Z sing 381 n n 
C12 H12A R2Z sing 382 n n 
C13 H13 R2Z sing 383 n n 
C13 H13A R2Z sing 384 n n 
O1P HO1P R2Z sing 385 n n 
C20 C21 R2Z sing 386 n n 
C20 H20 R2Z sing 387 n n 
O4P C21 R2Z sing 388 n n 
C21 H21 R2Z sing 389 n n 
C21 H21A R2Z sing 390 n n 
C22 H22 R2Z sing 391 n n 
O3P HO3P R2Z sing 392 n n 
#
_atom_sites.entry_id                     3TCZ 
_atom_sites.fract_transf_matrix[1][1]    0.014412 
_atom_sites.fract_transf_matrix[1][2]    0.00832 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016641 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012562 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 R2Z A 1 1 1 R2Z R2Z . 
C 3 PE4 A 1 300 300 PE4 PE4 . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 164 1 HOH HOH . 
D 4 HOH A 6 165 6 HOH HOH . 
D 4 HOH A 7 166 7 HOH HOH . 
D 4 HOH A 8 167 8 HOH HOH . 
D 4 HOH A 9 168 9 HOH HOH . 
D 4 HOH A 10 169 10 HOH HOH . 
D 4 HOH A 11 170 11 HOH HOH . 
D 4 HOH A 12 171 12 HOH HOH . 
D 4 HOH A 13 172 13 HOH HOH . 
D 4 HOH A 14 173 14 HOH HOH . 
D 4 HOH A 15 174 15 HOH HOH . 
D 4 HOH A 16 175 16 HOH HOH . 
D 4 HOH A 17 176 17 HOH HOH . 
D 4 HOH A 18 177 18 HOH HOH . 
D 4 HOH A 19 178 19 HOH HOH . 
D 4 HOH A 20 179 20 HOH HOH . 
D 4 HOH A 21 180 21 HOH HOH . 
D 4 HOH A 22 181 22 HOH HOH . 
D 4 HOH A 23 182 23 HOH HOH . 
D 4 HOH A 24 183 24 HOH HOH . 
D 4 HOH A 25 184 25 HOH HOH . 
D 4 HOH A 26 185 26 HOH HOH . 
D 4 HOH A 27 186 27 HOH HOH . 
D 4 HOH A 28 187 28 HOH HOH . 
D 4 HOH A 29 188 29 HOH HOH . 
D 4 HOH A 30 189 30 HOH HOH . 
D 4 HOH A 31 190 31 HOH HOH . 
D 4 HOH A 32 191 32 HOH HOH . 
D 4 HOH A 33 192 33 HOH HOH . 
D 4 HOH A 34 193 34 HOH HOH . 
D 4 HOH A 35 194 35 HOH HOH . 
D 4 HOH A 36 195 36 HOH HOH . 
D 4 HOH A 37 196 37 HOH HOH . 
D 4 HOH A 38 197 38 HOH HOH . 
D 4 HOH A 39 198 39 HOH HOH . 
D 4 HOH A 40 199 40 HOH HOH . 
D 4 HOH A 41 200 41 HOH HOH . 
D 4 HOH A 42 201 42 HOH HOH . 
D 4 HOH A 43 202 43 HOH HOH . 
D 4 HOH A 44 203 44 HOH HOH . 
D 4 HOH A 45 204 45 HOH HOH . 
D 4 HOH A 46 205 46 HOH HOH . 
D 4 HOH A 47 206 47 HOH HOH . 
D 4 HOH A 48 207 48 HOH HOH . 
D 4 HOH A 49 208 49 HOH HOH . 
D 4 HOH A 50 209 50 HOH HOH . 
D 4 HOH A 51 210 51 HOH HOH . 
D 4 HOH A 52 211 52 HOH HOH . 
D 4 HOH A 53 212 53 HOH HOH . 
D 4 HOH A 54 213 54 HOH HOH . 
D 4 HOH A 55 214 55 HOH HOH . 
D 4 HOH A 56 215 56 HOH HOH . 
D 4 HOH A 57 216 57 HOH HOH . 
D 4 HOH A 58 217 58 HOH HOH . 
D 4 HOH A 59 218 59 HOH HOH . 
D 4 HOH A 60 219 60 HOH HOH . 
D 4 HOH A 61 220 61 HOH HOH . 
D 4 HOH A 62 221 62 HOH HOH . 
D 4 HOH A 63 222 63 HOH HOH . 
D 4 HOH A 64 223 64 HOH HOH . 
D 4 HOH A 65 224 65 HOH HOH . 
D 4 HOH A 66 225 66 HOH HOH . 
D 4 HOH A 67 226 67 HOH HOH . 
D 4 HOH A 68 227 68 HOH HOH . 
D 4 HOH A 69 228 69 HOH HOH . 
D 4 HOH A 70 229 70 HOH HOH . 
D 4 HOH A 71 230 71 HOH HOH . 
D 4 HOH A 72 231 72 HOH HOH . 
D 4 HOH A 73 232 73 HOH HOH . 
D 4 HOH A 74 233 74 HOH HOH . 
D 4 HOH A 75 234 75 HOH HOH . 
D 4 HOH A 76 235 76 HOH HOH . 
D 4 HOH A 77 236 77 HOH HOH . 
D 4 HOH A 78 237 78 HOH HOH . 
D 4 HOH A 79 238 79 HOH HOH . 
D 4 HOH A 80 239 80 HOH HOH . 
D 4 HOH A 81 240 81 HOH HOH . 
D 4 HOH A 82 241 82 HOH HOH . 
D 4 HOH A 83 242 83 HOH HOH . 
D 4 HOH A 84 243 84 HOH HOH . 
D 4 HOH A 85 244 85 HOH HOH . 
D 4 HOH A 86 245 86 HOH HOH . 
D 4 HOH A 87 246 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P R2Z . . . B 2 5.702 47.237 12.759 1 41.31 ? P R2Z 1 A 1 
HETATM 2 N N0 R2Z . . . B 2 6.29 44.713 10.229 1 46.85 ? N0 R2Z 1 A 1 
HETATM 3 O O0 R2Z . . . B 2 8.183 45.519 9.268 1 50.38 ? O0 R2Z 1 A 1 
HETATM 4 C C1 R2Z . . . B 2 4.969 42.837 11.088 1 43.47 ? C1 R2Z 1 A 1 
HETATM 5 N N1 R2Z . . . B 2 8.045 41.59 12.234 1 44.37 ? N1 R2Z 1 A 1 
HETATM 6 C C2 R2Z . . . B 2 5.044 41.74 11.85 1 44.3 ? C2 R2Z 1 A 1 
HETATM 7 N N2 R2Z . . . B 2 11.18 40.417 13.749 1 44.57 ? N2 R2Z 1 A 1 
HETATM 8 O O2 R2Z . . . B 2 7.479 40.192 13.854 1 41.03 ? O2 R2Z 1 A 1 
HETATM 9 C C3 R2Z . . . B 2 5.731 41.617 13.183 1 44.82 ? C3 R2Z 1 A 1 
HETATM 10 N N3 R2Z . . . B 2 10.813 39.411 8.178 1 57.85 ? N3 R2Z 1 A 1 
HETATM 11 O O3 R2Z . . . B 2 10.002 42.256 14.048 1 43.98 ? O3 R2Z 1 A 1 
HETATM 12 C C4 R2Z . . . B 2 4.92 40.5 13.839 1 44.82 ? C4 R2Z 1 A 1 
HETATM 13 N N4 R2Z . . . B 2 9.145 38.758 6.692 1 59.05 ? N4 R2Z 1 A 1 
HETATM 14 C C5 R2Z . . . B 2 4.346 39.641 12.713 1 45.47 ? C5 R2Z 1 A 1 
HETATM 15 N N5 R2Z . . . B 2 10.868 37.308 7.213 1 57.78 ? N5 R2Z 1 A 1 
HETATM 16 C C6 R2Z . . . B 2 4.352 40.471 11.434 1 45.46 ? C6 R2Z 1 A 1 
HETATM 17 C C7 R2Z . . . B 2 7.143 41.11 13.102 1 43.09 ? C7 R2Z 1 A 1 
HETATM 18 C C9 R2Z . . . B 2 9.359 40.933 12.118 1 46.19 ? C9 R2Z 1 A 1 
HETATM 19 C C10 R2Z . . . B 2 10.211 41.243 13.361 1 45.43 ? C10 R2Z 1 A 1 
HETATM 20 C C11 R2Z . . . B 2 10.033 41.46 10.867 1 49.13 ? C11 R2Z 1 A 1 
HETATM 21 C C12 R2Z . . . B 2 11.138 40.535 10.35 1 52.6 ? C12 R2Z 1 A 1 
HETATM 22 C C13 R2Z . . . B 2 10.563 39.33 9.614 1 55.38 ? C13 R2Z 1 A 1 
HETATM 23 C C14 R2Z . . . B 2 10.279 38.496 7.357 1 58.83 ? C14 R2Z 1 A 1 
HETATM 24 O O1P R2Z . . . B 2 7.113 46.722 12.629 1 40.93 ? O1P R2Z 1 A 1 
HETATM 25 C C20 R2Z . . . B 2 5.643 44.183 11.449 1 45.22 ? C20 R2Z 1 A 1 
HETATM 26 C C21 R2Z . . . B 2 4.518 45.123 11.945 1 43.18 ? C21 R2Z 1 A 1 
HETATM 27 C C22 R2Z . . . B 2 7.609 44.7 10.059 1 49.68 ? C22 R2Z 1 A 1 
HETATM 28 O O2P R2Z . . . B 2 5.581 48.725 12.566 1 39.08 ? O2P R2Z 1 A 1 
HETATM 29 O O3P R2Z . . . B 2 5.19 46.933 14.154 1 43.48 ? O3P R2Z 1 A 1 
HETATM 30 O O4P R2Z . . . B 2 4.833 46.576 11.693 1 41.99 ? O4P R2Z 1 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           30 
#