data_3TDW
#
_model_server_result.job_id            ybvYuLN7xjJAIrRmYBnthA 
_model_server_result.datetime_utc      '2024-12-22 05:57:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tdw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":500}' 
#
_entry.id    3TDW 
#
_exptl.entry_id    3TDW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.201 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.49 
_cell.angle_gamma         90 
_cell.entry_id            3TDW 
_cell.length_a            83.06 
_cell.length_b            54.69 
_cell.length_c            77.81 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TDW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 55 A GLU 55 1_555 E MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc2 A OD2 ASP 218 A ASP 218 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc3 A OD1 ASP 218 A ASP 218 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc4 A OD2 ASP 218 A ASP 218 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc5 B O2A GDP . A GDP 500 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc6 B O2B GDP . A GDP 500 1_555 C MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc7 B O3B GDP . A GDP 500 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc8 C MG MG . A MG 501 1_555 G O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc9 C MG MG . A MG 501 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc10 D MG MG . A MG 502 1_555 G O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc11 D MG MG . A MG 502 1_555 G O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc12 D MG MG . A MG 502 1_555 G O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc13 E MG MG . A MG 503 1_555 G O HOH . A HOH 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc14 E MG MG . A MG 503 1_555 G O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc15 E MG MG . A MG 503 1_555 G O HOH . A HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? 
metalc ? metalc16 F MG MG . A MG 504 1_555 G O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc17 F MG MG . A MG 504 1_555 G O HOH . A HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc18 F MG MG . A MG 504 1_555 G O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc19 F MG MG . A MG 504 1_555 G O HOH . A HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
#
_chem_comp.formula           'C10 H15 N5 O11 P2' 
_chem_comp.formula_weight    443.201 
_chem_comp.id                GDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              'rna linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B GDP doub 83 n n 
PB O2B GDP sing 84 n n 
PB O3B GDP sing 85 n n 
PB O3A GDP sing 86 n n 
O2B HOB2 GDP sing 87 n n 
O3B HOB3 GDP sing 88 n n 
O3A PA GDP sing 89 n n 
PA O1A GDP doub 90 n n 
PA O2A GDP sing 91 n n 
PA O5' GDP sing 92 n n 
O2A HOA2 GDP sing 93 n n 
O5' C5' GDP sing 94 n n 
C5' C4' GDP sing 95 n n 
C5' H5' GDP sing 96 n n 
C5' "H5''" GDP sing 97 n n 
C4' O4' GDP sing 98 n n 
C4' C3' GDP sing 99 n n 
C4' H4' GDP sing 100 n n 
O4' C1' GDP sing 101 n n 
C3' O3' GDP sing 102 n n 
C3' C2' GDP sing 103 n n 
C3' H3' GDP sing 104 n n 
O3' HO3' GDP sing 105 n n 
C2' O2' GDP sing 106 n n 
C2' C1' GDP sing 107 n n 
C2' H2' GDP sing 108 n n 
O2' HO2' GDP sing 109 n n 
C1' N9 GDP sing 110 n n 
C1' H1' GDP sing 111 n n 
N9 C8 GDP sing 112 n y 
N9 C4 GDP sing 113 n y 
C8 N7 GDP doub 114 n y 
C8 H8 GDP sing 115 n n 
N7 C5 GDP sing 116 n y 
C5 C6 GDP sing 117 n n 
C5 C4 GDP doub 118 n y 
C6 O6 GDP doub 119 n n 
C6 N1 GDP sing 120 n n 
N1 C2 GDP sing 121 n n 
N1 HN1 GDP sing 122 n n 
C2 N2 GDP sing 123 n n 
C2 N3 GDP doub 124 n n 
N2 HN21 GDP sing 125 n n 
N2 HN22 GDP sing 126 n n 
N3 C4 GDP sing 127 n n 
#
_atom_sites.entry_id                     3TDW 
_atom_sites.fract_transf_matrix[1][1]    0.012039 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004026 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018285 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013552 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 500 500 GDP GDP . 
C 3 MG A 1 501 501 MG MG . 
D 3 MG A 1 502 502 MG MG . 
E 3 MG A 1 503 503 MG MG . 
F 3 MG A 1 504 504 MG MG . 
G 4 HOH A 1 307 307 HOH HOH . 
G 4 HOH A 2 308 308 HOH HOH . 
G 4 HOH A 3 309 309 HOH HOH . 
G 4 HOH A 4 310 310 HOH HOH . 
G 4 HOH A 5 311 311 HOH HOH . 
G 4 HOH A 6 312 312 HOH HOH . 
G 4 HOH A 7 313 313 HOH HOH . 
G 4 HOH A 8 314 314 HOH HOH . 
G 4 HOH A 9 315 315 HOH HOH . 
G 4 HOH A 10 316 316 HOH HOH . 
G 4 HOH A 11 317 317 HOH HOH . 
G 4 HOH A 12 318 318 HOH HOH . 
G 4 HOH A 13 319 319 HOH HOH . 
G 4 HOH A 14 320 320 HOH HOH . 
G 4 HOH A 15 321 321 HOH HOH . 
G 4 HOH A 16 322 322 HOH HOH . 
G 4 HOH A 17 323 323 HOH HOH . 
G 4 HOH A 18 324 324 HOH HOH . 
G 4 HOH A 19 325 325 HOH HOH . 
G 4 HOH A 20 326 326 HOH HOH . 
G 4 HOH A 21 327 327 HOH HOH . 
G 4 HOH A 22 328 328 HOH HOH . 
G 4 HOH A 23 329 329 HOH HOH . 
G 4 HOH A 24 330 330 HOH HOH . 
G 4 HOH A 25 331 331 HOH HOH . 
G 4 HOH A 26 332 332 HOH HOH . 
G 4 HOH A 27 333 333 HOH HOH . 
G 4 HOH A 28 334 334 HOH HOH . 
G 4 HOH A 29 335 335 HOH HOH . 
G 4 HOH A 30 336 336 HOH HOH . 
G 4 HOH A 31 337 337 HOH HOH . 
G 4 HOH A 32 338 338 HOH HOH . 
G 4 HOH A 33 339 339 HOH HOH . 
G 4 HOH A 34 340 340 HOH HOH . 
G 4 HOH A 35 341 341 HOH HOH . 
G 4 HOH A 36 342 342 HOH HOH . 
G 4 HOH A 37 343 343 HOH HOH . 
G 4 HOH A 38 344 344 HOH HOH . 
G 4 HOH A 39 345 345 HOH HOH . 
G 4 HOH A 40 346 346 HOH HOH . 
G 4 HOH A 41 347 347 HOH HOH . 
G 4 HOH A 42 348 348 HOH HOH . 
G 4 HOH A 43 349 349 HOH HOH . 
G 4 HOH A 44 350 350 HOH HOH . 
G 4 HOH A 45 351 351 HOH HOH . 
G 4 HOH A 46 352 352 HOH HOH . 
G 4 HOH A 47 353 353 HOH HOH . 
G 4 HOH A 48 354 354 HOH HOH . 
G 4 HOH A 49 355 355 HOH HOH . 
G 4 HOH A 50 356 356 HOH HOH . 
G 4 HOH A 51 357 357 HOH HOH . 
G 4 HOH A 52 358 358 HOH HOH . 
G 4 HOH A 53 359 359 HOH HOH . 
G 4 HOH A 54 360 360 HOH HOH . 
G 4 HOH A 55 361 361 HOH HOH . 
G 4 HOH A 56 362 362 HOH HOH . 
G 4 HOH A 57 363 363 HOH HOH . 
G 4 HOH A 58 364 364 HOH HOH . 
G 4 HOH A 59 365 365 HOH HOH . 
G 4 HOH A 60 366 366 HOH HOH . 
G 4 HOH A 61 367 367 HOH HOH . 
G 4 HOH A 62 368 368 HOH HOH . 
G 4 HOH A 63 369 369 HOH HOH . 
G 4 HOH A 64 370 370 HOH HOH . 
G 4 HOH A 65 371 371 HOH HOH . 
G 4 HOH A 66 372 372 HOH HOH . 
G 4 HOH A 67 373 373 HOH HOH . 
G 4 HOH A 68 374 374 HOH HOH . 
G 4 HOH A 69 375 375 HOH HOH . 
G 4 HOH A 70 376 376 HOH HOH . 
G 4 HOH A 71 377 377 HOH HOH . 
G 4 HOH A 72 378 378 HOH HOH . 
G 4 HOH A 73 379 379 HOH HOH . 
G 4 HOH A 74 380 380 HOH HOH . 
G 4 HOH A 75 381 381 HOH HOH . 
G 4 HOH A 76 382 382 HOH HOH . 
G 4 HOH A 77 383 383 HOH HOH . 
G 4 HOH A 78 384 384 HOH HOH . 
G 4 HOH A 79 385 385 HOH HOH . 
G 4 HOH A 80 386 386 HOH HOH . 
G 4 HOH A 81 387 387 HOH HOH . 
G 4 HOH A 82 388 388 HOH HOH . 
G 4 HOH A 83 389 389 HOH HOH . 
G 4 HOH A 84 390 390 HOH HOH . 
G 4 HOH A 85 391 391 HOH HOH . 
G 4 HOH A 86 511 511 HOH HOH . 
G 4 HOH A 87 512 512 HOH HOH . 
G 4 HOH A 88 513 1 HOH HOH . 
G 4 HOH A 89 514 2 HOH HOH . 
G 4 HOH A 90 515 3 HOH HOH . 
G 4 HOH A 91 516 4 HOH HOH . 
G 4 HOH A 92 517 5 HOH HOH . 
G 4 HOH A 93 518 6 HOH HOH . 
G 4 HOH A 94 519 7 HOH HOH . 
G 4 HOH A 95 520 8 HOH HOH . 
G 4 HOH A 96 521 521 HOH HOH . 
G 4 HOH A 97 522 522 HOH HOH . 
G 4 HOH A 98 523 523 HOH HOH . 
G 4 HOH A 99 524 9 HOH HOH . 
G 4 HOH A 100 525 10 HOH HOH . 
G 4 HOH A 101 526 11 HOH HOH . 
G 4 HOH A 102 527 12 HOH HOH . 
G 4 HOH A 103 528 13 HOH HOH . 
G 4 HOH A 104 529 14 HOH HOH . 
G 4 HOH A 105 530 15 HOH HOH . 
G 4 HOH A 106 531 531 HOH HOH . 
G 4 HOH A 107 532 532 HOH HOH . 
G 4 HOH A 108 533 533 HOH HOH . 
G 4 HOH A 109 534 16 HOH HOH . 
G 4 HOH A 110 535 17 HOH HOH . 
G 4 HOH A 111 536 18 HOH HOH . 
G 4 HOH A 112 537 19 HOH HOH . 
G 4 HOH A 113 538 20 HOH HOH . 
G 4 HOH A 114 539 21 HOH HOH . 
G 4 HOH A 115 540 22 HOH HOH . 
G 4 HOH A 116 541 541 HOH HOH . 
G 4 HOH A 117 542 542 HOH HOH . 
G 4 HOH A 118 543 543 HOH HOH . 
G 4 HOH A 119 544 544 HOH HOH . 
G 4 HOH A 120 545 23 HOH HOH . 
G 4 HOH A 121 546 24 HOH HOH . 
G 4 HOH A 122 547 25 HOH HOH . 
G 4 HOH A 123 548 26 HOH HOH . 
G 4 HOH A 124 549 27 HOH HOH . 
G 4 HOH A 125 550 28 HOH HOH . 
G 4 HOH A 126 551 29 HOH HOH . 
G 4 HOH A 127 552 30 HOH HOH . 
G 4 HOH A 128 553 31 HOH HOH . 
G 4 HOH A 129 554 32 HOH HOH . 
G 4 HOH A 130 555 33 HOH HOH . 
G 4 HOH A 131 556 34 HOH HOH . 
G 4 HOH A 132 557 35 HOH HOH . 
G 4 HOH A 133 558 36 HOH HOH . 
G 4 HOH A 134 559 37 HOH HOH . 
G 4 HOH A 135 560 38 HOH HOH . 
G 4 HOH A 136 561 39 HOH HOH . 
G 4 HOH A 137 562 40 HOH HOH . 
G 4 HOH A 138 563 41 HOH HOH . 
G 4 HOH A 139 564 42 HOH HOH . 
G 4 HOH A 140 565 43 HOH HOH . 
G 4 HOH A 141 566 44 HOH HOH . 
G 4 HOH A 142 567 45 HOH HOH . 
G 4 HOH A 143 568 46 HOH HOH . 
G 4 HOH A 144 569 47 HOH HOH . 
G 4 HOH A 145 570 48 HOH HOH . 
G 4 HOH A 146 571 49 HOH HOH . 
G 4 HOH A 147 572 50 HOH HOH . 
G 4 HOH A 148 573 51 HOH HOH . 
G 4 HOH A 149 574 52 HOH HOH . 
G 4 HOH A 150 575 53 HOH HOH . 
G 4 HOH A 151 576 54 HOH HOH . 
G 4 HOH A 152 577 55 HOH HOH . 
G 4 HOH A 153 578 56 HOH HOH . 
G 4 HOH A 154 579 57 HOH HOH . 
G 4 HOH A 155 580 58 HOH HOH . 
G 4 HOH A 156 581 59 HOH HOH . 
G 4 HOH A 157 582 60 HOH HOH . 
G 4 HOH A 158 583 61 HOH HOH . 
G 4 HOH A 159 584 62 HOH HOH . 
G 4 HOH A 160 585 63 HOH HOH . 
G 4 HOH A 161 586 64 HOH HOH . 
G 4 HOH A 162 587 65 HOH HOH . 
G 4 HOH A 163 588 66 HOH HOH . 
G 4 HOH A 164 589 67 HOH HOH . 
G 4 HOH A 165 590 68 HOH HOH . 
G 4 HOH A 166 591 69 HOH HOH . 
G 4 HOH A 167 592 70 HOH HOH . 
G 4 HOH A 168 593 71 HOH HOH . 
G 4 HOH A 169 594 72 HOH HOH . 
G 4 HOH A 170 595 73 HOH HOH . 
G 4 HOH A 171 596 74 HOH HOH . 
G 4 HOH A 172 597 75 HOH HOH . 
G 4 HOH A 173 598 76 HOH HOH . 
G 4 HOH A 174 599 77 HOH HOH . 
G 4 HOH A 175 600 78 HOH HOH . 
G 4 HOH A 176 601 79 HOH HOH . 
G 4 HOH A 177 602 80 HOH HOH . 
G 4 HOH A 178 603 81 HOH HOH . 
G 4 HOH A 179 604 82 HOH HOH . 
G 4 HOH A 180 605 83 HOH HOH . 
G 4 HOH A 181 606 84 HOH HOH . 
G 4 HOH A 182 607 85 HOH HOH . 
G 4 HOH A 183 608 86 HOH HOH . 
G 4 HOH A 184 609 87 HOH HOH . 
G 4 HOH A 185 610 88 HOH HOH . 
G 4 HOH A 186 611 89 HOH HOH . 
G 4 HOH A 187 612 90 HOH HOH . 
G 4 HOH A 188 613 91 HOH HOH . 
G 4 HOH A 189 614 92 HOH HOH . 
G 4 HOH A 190 615 93 HOH HOH . 
G 4 HOH A 191 616 94 HOH HOH . 
G 4 HOH A 192 617 95 HOH HOH . 
G 4 HOH A 193 618 96 HOH HOH . 
G 4 HOH A 194 619 97 HOH HOH . 
G 4 HOH A 195 620 98 HOH HOH . 
G 4 HOH A 196 621 99 HOH HOH . 
G 4 HOH A 197 622 100 HOH HOH . 
G 4 HOH A 198 623 101 HOH HOH . 
G 4 HOH A 199 624 102 HOH HOH . 
G 4 HOH A 200 625 103 HOH HOH . 
G 4 HOH A 201 626 104 HOH HOH . 
G 4 HOH A 202 627 105 HOH HOH . 
G 4 HOH A 203 628 106 HOH HOH . 
G 4 HOH A 204 629 107 HOH HOH . 
G 4 HOH A 205 630 108 HOH HOH . 
G 4 HOH A 206 631 109 HOH HOH . 
G 4 HOH A 207 632 110 HOH HOH . 
G 4 HOH A 208 633 111 HOH HOH . 
G 4 HOH A 209 634 112 HOH HOH . 
G 4 HOH A 210 635 113 HOH HOH . 
G 4 HOH A 211 636 114 HOH HOH . 
G 4 HOH A 212 637 115 HOH HOH . 
G 4 HOH A 213 638 116 HOH HOH . 
G 4 HOH A 214 639 117 HOH HOH . 
G 4 HOH A 215 640 118 HOH HOH . 
G 4 HOH A 216 641 119 HOH HOH . 
G 4 HOH A 217 642 120 HOH HOH . 
G 4 HOH A 218 643 121 HOH HOH . 
G 4 HOH A 219 644 122 HOH HOH . 
G 4 HOH A 220 645 123 HOH HOH . 
G 4 HOH A 221 646 124 HOH HOH . 
G 4 HOH A 222 647 125 HOH HOH . 
G 4 HOH A 223 648 126 HOH HOH . 
G 4 HOH A 224 649 127 HOH HOH . 
G 4 HOH A 225 650 128 HOH HOH . 
G 4 HOH A 226 651 129 HOH HOH . 
G 4 HOH A 227 652 130 HOH HOH . 
G 4 HOH A 228 653 131 HOH HOH . 
G 4 HOH A 229 654 132 HOH HOH . 
G 4 HOH A 230 655 133 HOH HOH . 
G 4 HOH A 231 656 134 HOH HOH . 
G 4 HOH A 232 657 135 HOH HOH . 
G 4 HOH A 233 658 136 HOH HOH . 
G 4 HOH A 234 659 137 HOH HOH . 
G 4 HOH A 235 660 138 HOH HOH . 
G 4 HOH A 236 661 139 HOH HOH . 
G 4 HOH A 237 662 140 HOH HOH . 
G 4 HOH A 238 663 141 HOH HOH . 
G 4 HOH A 239 664 142 HOH HOH . 
G 4 HOH A 240 665 143 HOH HOH . 
G 4 HOH A 241 666 144 HOH HOH . 
G 4 HOH A 242 667 145 HOH HOH . 
G 4 HOH A 243 668 146 HOH HOH . 
G 4 HOH A 244 669 147 HOH HOH . 
G 4 HOH A 245 670 148 HOH HOH . 
G 4 HOH A 246 671 149 HOH HOH . 
G 4 HOH A 247 672 150 HOH HOH . 
G 4 HOH A 248 673 151 HOH HOH . 
G 4 HOH A 249 674 152 HOH HOH . 
G 4 HOH A 250 675 153 HOH HOH . 
G 4 HOH A 251 676 154 HOH HOH . 
G 4 HOH A 252 677 155 HOH HOH . 
G 4 HOH A 253 678 156 HOH HOH . 
G 4 HOH A 254 679 157 HOH HOH . 
G 4 HOH A 255 680 158 HOH HOH . 
G 4 HOH A 256 681 159 HOH HOH . 
G 4 HOH A 257 682 160 HOH HOH . 
G 4 HOH A 258 683 161 HOH HOH . 
G 4 HOH A 259 684 162 HOH HOH . 
G 4 HOH A 260 685 163 HOH HOH . 
G 4 HOH A 261 686 164 HOH HOH . 
G 4 HOH A 262 687 165 HOH HOH . 
G 4 HOH A 263 688 166 HOH HOH . 
G 4 HOH A 264 689 167 HOH HOH . 
G 4 HOH A 265 690 168 HOH HOH . 
G 4 HOH A 266 691 169 HOH HOH . 
G 4 HOH A 267 692 170 HOH HOH . 
G 4 HOH A 268 693 171 HOH HOH . 
G 4 HOH A 269 694 172 HOH HOH . 
G 4 HOH A 270 695 173 HOH HOH . 
G 4 HOH A 271 696 174 HOH HOH . 
G 4 HOH A 272 697 175 HOH HOH . 
G 4 HOH A 273 698 176 HOH HOH . 
G 4 HOH A 274 699 177 HOH HOH . 
G 4 HOH A 275 700 178 HOH HOH . 
G 4 HOH A 276 701 179 HOH HOH . 
G 4 HOH A 277 702 180 HOH HOH . 
G 4 HOH A 278 703 181 HOH HOH . 
G 4 HOH A 279 704 182 HOH HOH . 
G 4 HOH A 280 705 183 HOH HOH . 
G 4 HOH A 281 706 184 HOH HOH . 
G 4 HOH A 282 707 185 HOH HOH . 
G 4 HOH A 283 708 186 HOH HOH . 
G 4 HOH A 284 709 187 HOH HOH . 
G 4 HOH A 285 710 188 HOH HOH . 
G 4 HOH A 286 711 189 HOH HOH . 
G 4 HOH A 287 712 190 HOH HOH . 
G 4 HOH A 288 713 191 HOH HOH . 
G 4 HOH A 289 714 192 HOH HOH . 
G 4 HOH A 290 715 193 HOH HOH . 
G 4 HOH A 291 716 194 HOH HOH . 
G 4 HOH A 292 717 195 HOH HOH . 
G 4 HOH A 293 718 196 HOH HOH . 
G 4 HOH A 294 719 197 HOH HOH . 
G 4 HOH A 295 720 198 HOH HOH . 
G 4 HOH A 296 721 199 HOH HOH . 
G 4 HOH A 297 722 200 HOH HOH . 
G 4 HOH A 298 723 201 HOH HOH . 
G 4 HOH A 299 724 202 HOH HOH . 
G 4 HOH A 300 725 203 HOH HOH . 
G 4 HOH A 301 726 204 HOH HOH . 
G 4 HOH A 302 727 205 HOH HOH . 
G 4 HOH A 303 728 206 HOH HOH . 
G 4 HOH A 304 729 207 HOH HOH . 
G 4 HOH A 305 730 208 HOH HOH . 
G 4 HOH A 306 731 209 HOH HOH . 
G 4 HOH A 307 732 210 HOH HOH . 
G 4 HOH A 308 733 211 HOH HOH . 
G 4 HOH A 309 734 212 HOH HOH . 
G 4 HOH A 310 735 213 HOH HOH . 
G 4 HOH A 311 736 214 HOH HOH . 
G 4 HOH A 312 737 215 HOH HOH . 
G 4 HOH A 313 738 216 HOH HOH . 
G 4 HOH A 314 739 217 HOH HOH . 
G 4 HOH A 315 740 218 HOH HOH . 
G 4 HOH A 316 741 219 HOH HOH . 
G 4 HOH A 317 742 220 HOH HOH . 
G 4 HOH A 318 743 221 HOH HOH . 
G 4 HOH A 319 744 222 HOH HOH . 
G 4 HOH A 320 745 223 HOH HOH . 
G 4 HOH A 321 746 224 HOH HOH . 
G 4 HOH A 322 747 225 HOH HOH . 
G 4 HOH A 323 748 226 HOH HOH . 
G 4 HOH A 324 749 227 HOH HOH . 
G 4 HOH A 325 750 228 HOH HOH . 
G 4 HOH A 326 751 229 HOH HOH . 
G 4 HOH A 327 752 230 HOH HOH . 
G 4 HOH A 328 753 231 HOH HOH . 
G 4 HOH A 329 754 232 HOH HOH . 
G 4 HOH A 330 755 233 HOH HOH . 
G 4 HOH A 331 756 234 HOH HOH . 
G 4 HOH A 332 757 235 HOH HOH . 
G 4 HOH A 333 758 236 HOH HOH . 
G 4 HOH A 334 759 237 HOH HOH . 
G 4 HOH A 335 760 238 HOH HOH . 
G 4 HOH A 336 761 239 HOH HOH . 
G 4 HOH A 337 762 240 HOH HOH . 
G 4 HOH A 338 763 241 HOH HOH . 
G 4 HOH A 339 764 242 HOH HOH . 
G 4 HOH A 340 765 243 HOH HOH . 
G 4 HOH A 341 766 244 HOH HOH . 
G 4 HOH A 342 767 245 HOH HOH . 
G 4 HOH A 343 768 246 HOH HOH . 
G 4 HOH A 344 769 247 HOH HOH . 
G 4 HOH A 345 770 248 HOH HOH . 
G 4 HOH A 346 771 249 HOH HOH . 
G 4 HOH A 347 772 250 HOH HOH . 
G 4 HOH A 348 773 251 HOH HOH . 
G 4 HOH A 349 774 252 HOH HOH . 
G 4 HOH A 350 775 253 HOH HOH . 
G 4 HOH A 351 776 254 HOH HOH . 
G 4 HOH A 352 777 255 HOH HOH . 
G 4 HOH A 353 778 256 HOH HOH . 
G 4 HOH A 354 779 257 HOH HOH . 
G 4 HOH A 355 780 258 HOH HOH . 
G 4 HOH A 356 781 259 HOH HOH . 
G 4 HOH A 357 782 260 HOH HOH . 
G 4 HOH A 358 783 261 HOH HOH . 
G 4 HOH A 359 784 262 HOH HOH . 
G 4 HOH A 360 785 263 HOH HOH . 
G 4 HOH A 361 786 264 HOH HOH . 
G 4 HOH A 362 787 265 HOH HOH . 
G 4 HOH A 363 788 266 HOH HOH . 
G 4 HOH A 364 789 267 HOH HOH . 
G 4 HOH A 365 790 268 HOH HOH . 
G 4 HOH A 366 791 269 HOH HOH . 
G 4 HOH A 367 792 270 HOH HOH . 
G 4 HOH A 368 793 271 HOH HOH . 
G 4 HOH A 369 794 272 HOH HOH . 
G 4 HOH A 370 795 273 HOH HOH . 
G 4 HOH A 371 796 274 HOH HOH . 
G 4 HOH A 372 797 275 HOH HOH . 
G 4 HOH A 373 798 276 HOH HOH . 
G 4 HOH A 374 799 277 HOH HOH . 
G 4 HOH A 375 800 278 HOH HOH . 
G 4 HOH A 376 801 279 HOH HOH . 
G 4 HOH A 377 802 280 HOH HOH . 
G 4 HOH A 378 803 281 HOH HOH . 
G 4 HOH A 379 804 282 HOH HOH . 
G 4 HOH A 380 805 283 HOH HOH . 
G 4 HOH A 381 806 284 HOH HOH . 
G 4 HOH A 382 807 285 HOH HOH . 
G 4 HOH A 383 808 286 HOH HOH . 
G 4 HOH A 384 809 287 HOH HOH . 
G 4 HOH A 385 810 288 HOH HOH . 
G 4 HOH A 386 811 289 HOH HOH . 
G 4 HOH A 387 812 290 HOH HOH . 
G 4 HOH A 388 813 291 HOH HOH . 
G 4 HOH A 389 814 292 HOH HOH . 
G 4 HOH A 390 815 293 HOH HOH . 
G 4 HOH A 391 816 294 HOH HOH . 
G 4 HOH A 392 817 295 HOH HOH . 
G 4 HOH A 393 818 296 HOH HOH . 
G 4 HOH A 394 819 297 HOH HOH . 
G 4 HOH A 395 820 298 HOH HOH . 
G 4 HOH A 396 821 299 HOH HOH . 
G 4 HOH A 397 822 300 HOH HOH . 
G 4 HOH A 398 823 301 HOH HOH . 
G 4 HOH A 399 824 302 HOH HOH . 
G 4 HOH A 400 825 303 HOH HOH . 
G 4 HOH A 401 826 304 HOH HOH . 
G 4 HOH A 402 827 305 HOH HOH . 
G 4 HOH A 403 828 306 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB GDP . . . B 2 -16.637 2.103 12.196 1 13.37 ? PB GDP 500 A 1 
HETATM 2 O O1B GDP . . . B 2 -15.618 1.229 11.515 1 13.34 ? O1B GDP 500 A 1 
HETATM 3 O O2B GDP . . . B 2 -16.541 1.851 13.672 1 11.24 ? O2B GDP 500 A 1 
HETATM 4 O O3B GDP . . . B 2 -17.998 1.858 11.662 1 12.3 ? O3B GDP 500 A 1 
HETATM 5 O O3A GDP . . . B 2 -16.222 3.638 11.858 1 12.12 ? O3A GDP 500 A 1 
HETATM 6 P PA GDP . . . B 2 -16.795 4.989 12.523 1 13.36 ? PA GDP 500 A 1 
HETATM 7 O O1A GDP . . . B 2 -18.012 5.563 11.86 1 13.93 ? O1A GDP 500 A 1 
HETATM 8 O O2A GDP . . . B 2 -16.987 4.798 14.009 1 12.62 ? O2A GDP 500 A 1 
HETATM 9 O O5' GDP . . . B 2 -15.559 5.993 12.3 1 12.93 ? O5' GDP 500 A 1 
HETATM 10 C C5' GDP . . . B 2 -14.259 5.553 12.681 1 15.94 ? C5' GDP 500 A 1 
HETATM 11 C C4' GDP . . . B 2 -13.621 6.577 13.61 1 17.93 ? C4' GDP 500 A 1 
HETATM 12 O O4' GDP . . . B 2 -13.39 7.804 12.918 1 16.49 ? O4' GDP 500 A 1 
HETATM 13 C C3' GDP . . . B 2 -14.498 6.958 14.791 1 16.09 ? C3' GDP 500 A 1 
HETATM 14 O O3' GDP . . . B 2 -14.393 5.985 15.833 1 17.95 ? O3' GDP 500 A 1 
HETATM 15 C C2' GDP . . . B 2 -13.905 8.292 15.183 1 17.84 ? C2' GDP 500 A 1 
HETATM 16 O O2' GDP . . . B 2 -12.713 8.027 15.927 1 22.61 ? O2' GDP 500 A 1 
HETATM 17 C C1' GDP . . . B 2 -13.518 8.889 13.835 1 15.97 ? C1' GDP 500 A 1 
HETATM 18 N N9 GDP . . . B 2 -14.612 9.77 13.375 1 17.05 ? N9 GDP 500 A 1 
HETATM 19 C C8 GDP . . . B 2 -15.572 9.48 12.473 1 16 ? C8 GDP 500 A 1 
HETATM 20 N N7 GDP . . . B 2 -16.412 10.532 12.297 1 12.35 ? N7 GDP 500 A 1 
HETATM 21 C C5 GDP . . . B 2 -15.983 11.51 13.126 1 12.47 ? C5 GDP 500 A 1 
HETATM 22 C C6 GDP . . . B 2 -16.385 12.897 13.421 1 14.38 ? C6 GDP 500 A 1 
HETATM 23 O O6 GDP . . . B 2 -17.38 13.404 12.869 1 15.06 ? O6 GDP 500 A 1 
HETATM 24 N N1 GDP . . . B 2 -15.672 13.579 14.333 1 17.32 ? N1 GDP 500 A 1 
HETATM 25 C C2 GDP . . . B 2 -14.589 13.043 14.931 1 15.48 ? C2 GDP 500 A 1 
HETATM 26 N N2 GDP . . . B 2 -13.899 13.792 15.827 1 18.71 ? N2 GDP 500 A 1 
HETATM 27 N N3 GDP . . . B 2 -14.146 11.791 14.69 1 18.13 ? N3 GDP 500 A 1 
HETATM 28 C C4 GDP . . . B 2 -14.797 10.999 13.813 1 16.53 ? C4 GDP 500 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           28 
#