data_3TEI # _model_server_result.job_id TUAfU_G-02zuWDKcW3CvxA _model_server_result.datetime_utc '2024-11-23 04:40:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tei # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 3TEI # _exptl.entry_id 3TEI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TEI _cell.length_a 41.7 _cell.length_b 58.98 _cell.length_c 155.73 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TEI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 3TEI _atom_sites.fract_transf_matrix[1][1] 0.023981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016955 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ANP A 1 401 1 ANP ANP . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 5 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 7 HOH HOH . D 4 HOH A 8 508 8 HOH HOH . D 4 HOH A 9 509 9 HOH HOH . D 4 HOH A 10 510 10 HOH HOH . D 4 HOH A 11 511 11 HOH HOH . D 4 HOH A 12 512 12 HOH HOH . D 4 HOH A 13 513 13 HOH HOH . D 4 HOH A 14 514 14 HOH HOH . D 4 HOH A 15 515 15 HOH HOH . D 4 HOH A 16 516 16 HOH HOH . D 4 HOH A 17 517 17 HOH HOH . D 4 HOH A 18 518 18 HOH HOH . D 4 HOH A 19 519 19 HOH HOH . D 4 HOH A 20 520 20 HOH HOH . D 4 HOH A 21 521 21 HOH HOH . D 4 HOH A 22 522 22 HOH HOH . D 4 HOH A 23 523 23 HOH HOH . D 4 HOH A 24 524 24 HOH HOH . D 4 HOH A 25 525 25 HOH HOH . D 4 HOH A 26 526 26 HOH HOH . D 4 HOH A 27 527 27 HOH HOH . D 4 HOH A 28 528 28 HOH HOH . D 4 HOH A 29 529 29 HOH HOH . D 4 HOH A 30 530 30 HOH HOH . D 4 HOH A 31 531 31 HOH HOH . D 4 HOH A 32 532 32 HOH HOH . D 4 HOH A 33 533 33 HOH HOH . D 4 HOH A 34 534 34 HOH HOH . D 4 HOH A 35 535 35 HOH HOH . D 4 HOH A 36 536 36 HOH HOH . D 4 HOH A 37 537 37 HOH HOH . D 4 HOH A 38 538 38 HOH HOH . D 4 HOH A 39 539 39 HOH HOH . D 4 HOH A 40 540 40 HOH HOH . D 4 HOH A 41 541 41 HOH HOH . D 4 HOH A 42 542 42 HOH HOH . D 4 HOH A 43 543 43 HOH HOH . D 4 HOH A 44 544 44 HOH HOH . D 4 HOH A 45 545 45 HOH HOH . D 4 HOH A 46 546 46 HOH HOH . D 4 HOH A 47 547 47 HOH HOH . D 4 HOH A 48 548 48 HOH HOH . D 4 HOH A 49 549 49 HOH HOH . D 4 HOH A 50 550 50 HOH HOH . D 4 HOH A 51 551 51 HOH HOH . D 4 HOH A 52 552 52 HOH HOH . D 4 HOH A 53 553 53 HOH HOH . D 4 HOH A 54 554 54 HOH HOH . D 4 HOH A 55 555 55 HOH HOH . D 4 HOH A 56 556 56 HOH HOH . D 4 HOH A 57 557 57 HOH HOH . D 4 HOH A 58 558 58 HOH HOH . D 4 HOH A 59 559 59 HOH HOH . D 4 HOH A 60 560 60 HOH HOH . D 4 HOH A 61 561 61 HOH HOH . D 4 HOH A 62 562 63 HOH HOH . D 4 HOH A 63 563 64 HOH HOH . D 4 HOH A 64 564 65 HOH HOH . D 4 HOH A 65 565 66 HOH HOH . D 4 HOH A 66 566 67 HOH HOH . D 4 HOH A 67 567 68 HOH HOH . D 4 HOH A 68 568 69 HOH HOH . D 4 HOH A 69 569 70 HOH HOH . D 4 HOH A 70 570 71 HOH HOH . D 4 HOH A 71 571 72 HOH HOH . D 4 HOH A 72 572 73 HOH HOH . D 4 HOH A 73 573 74 HOH HOH . D 4 HOH A 74 574 75 HOH HOH . D 4 HOH A 75 575 76 HOH HOH . D 4 HOH A 76 576 77 HOH HOH . D 4 HOH A 77 577 78 HOH HOH . D 4 HOH A 78 578 79 HOH HOH . D 4 HOH A 79 579 80 HOH HOH . D 4 HOH A 80 580 81 HOH HOH . D 4 HOH A 81 581 82 HOH HOH . D 4 HOH A 82 582 83 HOH HOH . D 4 HOH A 83 583 84 HOH HOH . D 4 HOH A 84 584 85 HOH HOH . D 4 HOH A 85 585 86 HOH HOH . D 4 HOH A 86 586 87 HOH HOH . D 4 HOH A 87 587 88 HOH HOH . D 4 HOH A 88 588 89 HOH HOH . D 4 HOH A 89 589 91 HOH HOH . D 4 HOH A 90 590 92 HOH HOH . D 4 HOH A 91 591 93 HOH HOH . D 4 HOH A 92 592 94 HOH HOH . D 4 HOH A 93 593 95 HOH HOH . D 4 HOH A 94 594 96 HOH HOH . D 4 HOH A 95 595 97 HOH HOH . D 4 HOH A 96 596 98 HOH HOH . D 4 HOH A 97 597 99 HOH HOH . D 4 HOH A 98 598 100 HOH HOH . D 4 HOH A 99 599 101 HOH HOH . D 4 HOH A 100 600 102 HOH HOH . D 4 HOH A 101 601 103 HOH HOH . D 4 HOH A 102 602 104 HOH HOH . D 4 HOH A 103 603 105 HOH HOH . D 4 HOH A 104 604 107 HOH HOH . D 4 HOH A 105 605 108 HOH HOH . D 4 HOH A 106 606 109 HOH HOH . D 4 HOH A 107 607 110 HOH HOH . D 4 HOH A 108 608 111 HOH HOH . D 4 HOH A 109 609 112 HOH HOH . D 4 HOH A 110 610 113 HOH HOH . D 4 HOH A 111 611 114 HOH HOH . D 4 HOH A 112 612 115 HOH HOH . E 4 HOH B 1 801 62 HOH HOH . E 4 HOH B 2 802 90 HOH HOH . E 4 HOH B 3 803 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . C 3 -2.302 -2.987 9.574 1 122.89 ? PG ANP 401 A 1 HETATM 2 O O1G ANP . . . C 3 -0.899 -2.864 9.015 1 122.69 ? O1G ANP 401 A 1 HETATM 3 O O2G ANP . . . C 3 -2.455 -2.178 10.914 1 95.26 ? O2G ANP 401 A 1 HETATM 4 O O3G ANP . . . C 3 -2.685 -4.527 9.875 1 191.33 ? O3G ANP 401 A 1 HETATM 5 P PB ANP . . . C 3 -2.944 -2.956 6.912 1 365.28 ? PB ANP 401 A 1 HETATM 6 O O1B ANP . . . C 3 -4.403 -2.917 6.254 1 46.43 ? O1B ANP 401 A 1 HETATM 7 O O2B ANP . . . C 3 -2.042 -4.256 6.803 1 101.61 ? O2B ANP 401 A 1 HETATM 8 N N3B ANP . . . C 3 -3.41 -2.394 8.5 1 257.7 ? N3B ANP 401 A 1 HETATM 9 P PA ANP . . . C 3 -2.751 -0.219 6.977 1 79.53 ? PA ANP 401 A 1 HETATM 10 O O1A ANP . . . C 3 -4.098 -0.2 7.745 1 40.3 ? O1A ANP 401 A 1 HETATM 11 O O2A ANP . . . C 3 -2.827 0.741 5.838 1 81.04 ? O2A ANP 401 A 1 HETATM 12 O O3A ANP . . . C 3 -2.429 -1.594 6.296 1 271.16 ? O3A ANP 401 A 1 HETATM 13 O O5' ANP . . . C 3 -1.543 0.226 7.884 1 50.88 ? O5' ANP 401 A 1 HETATM 14 C C5' ANP . . . C 3 -0.285 0.526 7.291 1 51 ? C5' ANP 401 A 1 HETATM 15 C C4' ANP . . . C 3 0.367 1.804 7.596 1 49.95 ? C4' ANP 401 A 1 HETATM 16 O O4' ANP . . . C 3 -0.453 2.853 7.216 1 48.27 ? O4' ANP 401 A 1 HETATM 17 C C3' ANP . . . C 3 0.589 1.918 9.064 1 49.38 ? C3' ANP 401 A 1 HETATM 18 O O3' ANP . . . C 3 1.862 2.419 9.322 1 48.66 ? O3' ANP 401 A 1 HETATM 19 C C2' ANP . . . C 3 -0.434 2.789 9.541 1 47.42 ? C2' ANP 401 A 1 HETATM 20 O O2' ANP . . . C 3 0.011 3.573 10.586 1 46.28 ? O2' ANP 401 A 1 HETATM 21 C C1' ANP . . . C 3 -0.749 3.623 8.377 1 46.29 ? C1' ANP 401 A 1 HETATM 22 N N9 ANP . . . C 3 -2.101 4.223 8.281 1 44.37 ? N9 ANP 401 A 1 HETATM 23 C C8 ANP . . . C 3 -3.233 3.588 7.917 1 42.66 ? C8 ANP 401 A 1 HETATM 24 N N7 ANP . . . C 3 -4.239 4.465 7.938 1 41.91 ? N7 ANP 401 A 1 HETATM 25 C C5 ANP . . . C 3 -3.76 5.679 8.321 1 41.09 ? C5 ANP 401 A 1 HETATM 26 C C6 ANP . . . C 3 -4.323 6.952 8.517 1 38.68 ? C6 ANP 401 A 1 HETATM 27 N N6 ANP . . . C 3 -5.73 7.159 8.302 1 36.81 ? N6 ANP 401 A 1 HETATM 28 N N1 ANP . . . C 3 -3.555 7.979 8.905 1 38.35 ? N1 ANP 401 A 1 HETATM 29 C C2 ANP . . . C 3 -2.245 7.798 9.097 1 39.06 ? C2 ANP 401 A 1 HETATM 30 N N3 ANP . . . C 3 -1.66 6.602 8.922 1 40.03 ? N3 ANP 401 A 1 HETATM 31 C C4 ANP . . . C 3 -2.391 5.53 8.536 1 42.08 ? C4 ANP 401 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #