data_3TF6
#
_model_server_result.job_id            JYHfyn0scHeR6eNYG5Jwyg 
_model_server_result.datetime_utc      '2024-11-28 17:27:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tf6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":201}' 
#
_entry.id    3TF6 
#
_exptl.entry_id    3TF6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TF6 
_cell.length_a            114.09 
_cell.length_b            114.09 
_cell.length_c            118.19 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TF6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,V 1 1 
B,I,J,K,L,W 2 1 
C,M,N,O,P,Q,R,S,T,U,X 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 M N N 
? 2 Q N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 77 A CYS 76 1_555 A SG CYS 176 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf2 B SG CYS 77 B CYS 76 1_555 B SG CYS 176 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf3 C SG CYS 77 C CYS 76 1_555 C SG CYS 176 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc1 E EU EU . A EU 206 1_555 F O6 DBH . A DBH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 E EU EU . A EU 206 1_555 F O3 DBH . A DBH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? 
metalc ? metalc3 I EU EU . B EU 206 1_555 J O3 DBH . B DBH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc4 I EU EU . B EU 206 1_555 J O6 DBH . B DBH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.033 ? 
metalc ? metalc5 N EU EU . C EU 206 1_555 O O3 DBH . C DBH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 146 n n 
C1 C2 GOL sing 147 n n 
C1 H11 GOL sing 148 n n 
C1 H12 GOL sing 149 n n 
O1 HO1 GOL sing 150 n n 
C2 O2 GOL sing 151 n n 
C2 C3 GOL sing 152 n n 
C2 H2 GOL sing 153 n n 
O2 HO2 GOL sing 154 n n 
C3 O3 GOL sing 155 n n 
C3 H31 GOL sing 156 n n 
C3 H32 GOL sing 157 n n 
O3 HO3 GOL sing 158 n n 
#
_atom_sites.entry_id                     3TF6 
_atom_sites.fract_transf_matrix[1][1]    0.008765 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008765 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008461 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 GOL A 1 201 201 GOL GOL . 
E 3 EU A 1 206 206 EU EU . 
F 4 DBH A 1 216 216 DBH DBH . 
G 5 SO4 A 1 221 221 SO4 SO4 . 
H 6 CL A 1 183 1 CL CL . 
I 3 EU B 1 206 206 EU EU . 
J 4 DBH B 1 216 216 DBH DBH . 
K 5 SO4 B 1 221 221 SO4 SO4 . 
L 6 CL B 1 183 1 CL CL . 
M 2 GOL C 1 201 201 GOL GOL . 
N 3 EU C 1 206 206 EU EU . 
O 4 DBH C 1 216 216 DBH DBH . 
P 5 SO4 C 1 221 221 SO4 SO4 . 
Q 2 GOL C 1 183 1 GOL GOL . 
R 2 GOL C 1 184 1 GOL GOL . 
S 6 CL C 1 185 1 CL CL . 
T 6 CL C 1 186 1 CL CL . 
U 6 CL C 1 187 1 CL CL . 
V 7 HOH A 1 184 1 HOH HOH . 
V 7 HOH A 2 185 3 HOH HOH . 
V 7 HOH A 3 186 6 HOH HOH . 
V 7 HOH A 4 187 8 HOH HOH . 
V 7 HOH A 5 188 9 HOH HOH . 
V 7 HOH A 6 189 13 HOH HOH . 
V 7 HOH A 7 190 18 HOH HOH . 
V 7 HOH A 8 191 23 HOH HOH . 
V 7 HOH A 9 192 24 HOH HOH . 
V 7 HOH A 10 193 25 HOH HOH . 
V 7 HOH A 11 194 26 HOH HOH . 
V 7 HOH A 12 195 29 HOH HOH . 
V 7 HOH A 13 196 31 HOH HOH . 
V 7 HOH A 14 197 32 HOH HOH . 
V 7 HOH A 15 198 35 HOH HOH . 
V 7 HOH A 16 199 36 HOH HOH . 
V 7 HOH A 17 200 43 HOH HOH . 
V 7 HOH A 18 202 44 HOH HOH . 
V 7 HOH A 19 203 45 HOH HOH . 
V 7 HOH A 20 204 54 HOH HOH . 
V 7 HOH A 21 205 60 HOH HOH . 
V 7 HOH A 22 207 61 HOH HOH . 
V 7 HOH A 23 208 62 HOH HOH . 
V 7 HOH A 24 209 70 HOH HOH . 
V 7 HOH A 25 210 71 HOH HOH . 
V 7 HOH A 26 211 79 HOH HOH . 
V 7 HOH A 27 212 80 HOH HOH . 
V 7 HOH A 28 213 81 HOH HOH . 
V 7 HOH A 29 214 82 HOH HOH . 
V 7 HOH A 30 215 84 HOH HOH . 
V 7 HOH A 31 217 85 HOH HOH . 
V 7 HOH A 32 218 87 HOH HOH . 
V 7 HOH A 33 219 88 HOH HOH . 
V 7 HOH A 34 220 89 HOH HOH . 
V 7 HOH A 35 222 90 HOH HOH . 
V 7 HOH A 36 223 91 HOH HOH . 
V 7 HOH A 37 224 111 HOH HOH . 
V 7 HOH A 38 225 114 HOH HOH . 
V 7 HOH A 39 226 115 HOH HOH . 
V 7 HOH A 40 227 116 HOH HOH . 
V 7 HOH A 41 228 119 HOH HOH . 
V 7 HOH A 42 229 120 HOH HOH . 
V 7 HOH A 43 230 121 HOH HOH . 
V 7 HOH A 44 231 122 HOH HOH . 
V 7 HOH A 45 232 123 HOH HOH . 
W 7 HOH B 1 184 20 HOH HOH . 
W 7 HOH B 2 185 34 HOH HOH . 
W 7 HOH B 3 186 38 HOH HOH . 
W 7 HOH B 4 187 58 HOH HOH . 
W 7 HOH B 5 188 64 HOH HOH . 
W 7 HOH B 6 189 65 HOH HOH . 
W 7 HOH B 7 190 72 HOH HOH . 
W 7 HOH B 8 191 83 HOH HOH . 
W 7 HOH B 9 192 92 HOH HOH . 
W 7 HOH B 10 193 93 HOH HOH . 
W 7 HOH B 11 194 94 HOH HOH . 
W 7 HOH B 12 195 95 HOH HOH . 
W 7 HOH B 13 196 96 HOH HOH . 
W 7 HOH B 14 197 97 HOH HOH . 
W 7 HOH B 15 198 98 HOH HOH . 
X 7 HOH C 1 188 2 HOH HOH . 
X 7 HOH C 2 189 4 HOH HOH . 
X 7 HOH C 3 190 7 HOH HOH . 
X 7 HOH C 4 191 10 HOH HOH . 
X 7 HOH C 5 192 11 HOH HOH . 
X 7 HOH C 6 193 12 HOH HOH . 
X 7 HOH C 7 194 14 HOH HOH . 
X 7 HOH C 8 195 15 HOH HOH . 
X 7 HOH C 9 196 16 HOH HOH . 
X 7 HOH C 10 197 17 HOH HOH . 
X 7 HOH C 11 198 19 HOH HOH . 
X 7 HOH C 12 199 21 HOH HOH . 
X 7 HOH C 13 200 22 HOH HOH . 
X 7 HOH C 14 202 27 HOH HOH . 
X 7 HOH C 15 203 28 HOH HOH . 
X 7 HOH C 16 204 30 HOH HOH . 
X 7 HOH C 17 205 33 HOH HOH . 
X 7 HOH C 18 207 37 HOH HOH . 
X 7 HOH C 19 208 39 HOH HOH . 
X 7 HOH C 20 209 40 HOH HOH . 
X 7 HOH C 21 210 41 HOH HOH . 
X 7 HOH C 22 211 42 HOH HOH . 
X 7 HOH C 23 212 47 HOH HOH . 
X 7 HOH C 24 213 48 HOH HOH . 
X 7 HOH C 25 214 50 HOH HOH . 
X 7 HOH C 26 215 51 HOH HOH . 
X 7 HOH C 27 217 52 HOH HOH . 
X 7 HOH C 28 218 53 HOH HOH . 
X 7 HOH C 29 219 55 HOH HOH . 
X 7 HOH C 30 220 56 HOH HOH . 
X 7 HOH C 31 222 59 HOH HOH . 
X 7 HOH C 32 223 63 HOH HOH . 
X 7 HOH C 33 224 67 HOH HOH . 
X 7 HOH C 34 225 69 HOH HOH . 
X 7 HOH C 35 226 73 HOH HOH . 
X 7 HOH C 36 227 74 HOH HOH . 
X 7 HOH C 37 228 75 HOH HOH . 
X 7 HOH C 38 229 76 HOH HOH . 
X 7 HOH C 39 230 77 HOH HOH . 
X 7 HOH C 40 231 78 HOH HOH . 
X 7 HOH C 41 232 86 HOH HOH . 
X 7 HOH C 42 233 99 HOH HOH . 
X 7 HOH C 43 234 100 HOH HOH . 
X 7 HOH C 44 235 101 HOH HOH . 
X 7 HOH C 45 236 102 HOH HOH . 
X 7 HOH C 46 237 103 HOH HOH . 
X 7 HOH C 47 238 104 HOH HOH . 
X 7 HOH C 48 239 105 HOH HOH . 
X 7 HOH C 49 240 106 HOH HOH . 
X 7 HOH C 50 241 107 HOH HOH . 
X 7 HOH C 51 242 108 HOH HOH . 
X 7 HOH C 52 243 109 HOH HOH . 
X 7 HOH C 53 244 110 HOH HOH . 
X 7 HOH C 54 245 112 HOH HOH . 
X 7 HOH C 55 246 113 HOH HOH . 
X 7 HOH C 56 247 117 HOH HOH . 
X 7 HOH C 57 248 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . M 2 67.055 44.275 36.18 1 50.66 ? C1 GOL 201 C 1 
HETATM 2 O O1 GOL . . . M 2 66.59 45.496 36.719 1 50.3 ? O1 GOL 201 C 1 
HETATM 3 C C2 GOL . . . M 2 65.825 43.553 35.739 1 52 ? C2 GOL 201 C 1 
HETATM 4 O O2 GOL . . . M 2 65.244 44.365 34.74 1 58.95 ? O2 GOL 201 C 1 
HETATM 5 C C3 GOL . . . M 2 66.134 42.19 35.146 1 57.46 ? C3 GOL 201 C 1 
HETATM 6 O O3 GOL . . . M 2 64.941 41.645 34.557 1 55.87 ? O3 GOL 201 C 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#