data_3TFL # _model_server_result.job_id Tj-pd-PRXcKWiWBAx4054Q _model_server_result.datetime_utc '2024-11-22 09:07:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":500}' # _entry.id 3TFL # _exptl.entry_id 3TFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TFL _cell.length_a 73.348 _cell.length_b 73.348 _cell.length_c 163.869 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3TFL _atom_sites.fract_transf_matrix[1][1] 0.013634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1 1 EDO EDO . C 3 ZTP A 1 495 1 ZTP OTP . D 2 EDO A 1 496 1 EDO EDO . E 2 EDO A 1 497 1 EDO EDO . F 2 EDO A 1 498 1 EDO EDO . G 2 EDO A 1 499 1 EDO EDO . H 2 EDO A 1 500 1 EDO EDO . I 4 HOH A 1 2 2 HOH HOH . I 4 HOH A 2 4 4 HOH HOH . I 4 HOH A 3 5 5 HOH HOH . I 4 HOH A 4 6 6 HOH HOH . I 4 HOH A 5 7 7 HOH HOH . I 4 HOH A 6 8 8 HOH HOH . I 4 HOH A 7 10 10 HOH HOH . I 4 HOH A 8 11 11 HOH HOH . I 4 HOH A 9 13 13 HOH HOH . I 4 HOH A 10 14 14 HOH HOH . I 4 HOH A 11 15 15 HOH HOH . I 4 HOH A 12 16 16 HOH HOH . I 4 HOH A 13 17 17 HOH HOH . I 4 HOH A 14 18 18 HOH HOH . I 4 HOH A 15 19 19 HOH HOH . I 4 HOH A 16 20 20 HOH HOH . I 4 HOH A 17 21 21 HOH HOH . I 4 HOH A 18 22 22 HOH HOH . I 4 HOH A 19 23 23 HOH HOH . I 4 HOH A 20 25 25 HOH HOH . I 4 HOH A 21 26 26 HOH HOH . I 4 HOH A 22 27 27 HOH HOH . I 4 HOH A 23 28 28 HOH HOH . I 4 HOH A 24 29 29 HOH HOH . I 4 HOH A 25 30 30 HOH HOH . I 4 HOH A 26 31 31 HOH HOH . I 4 HOH A 27 32 32 HOH HOH . I 4 HOH A 28 33 33 HOH HOH . I 4 HOH A 29 34 34 HOH HOH . I 4 HOH A 30 35 35 HOH HOH . I 4 HOH A 31 36 36 HOH HOH . I 4 HOH A 32 37 37 HOH HOH . I 4 HOH A 33 38 38 HOH HOH . I 4 HOH A 34 39 39 HOH HOH . I 4 HOH A 35 40 40 HOH HOH . I 4 HOH A 36 41 41 HOH HOH . I 4 HOH A 37 42 42 HOH HOH . I 4 HOH A 38 43 43 HOH HOH . I 4 HOH A 39 44 44 HOH HOH . I 4 HOH A 40 45 45 HOH HOH . I 4 HOH A 41 46 46 HOH HOH . I 4 HOH A 42 47 47 HOH HOH . I 4 HOH A 43 48 48 HOH HOH . I 4 HOH A 44 49 49 HOH HOH . I 4 HOH A 45 50 50 HOH HOH . I 4 HOH A 46 51 51 HOH HOH . I 4 HOH A 47 52 52 HOH HOH . I 4 HOH A 48 53 53 HOH HOH . I 4 HOH A 49 54 54 HOH HOH . I 4 HOH A 50 55 55 HOH HOH . I 4 HOH A 51 56 56 HOH HOH . I 4 HOH A 52 57 57 HOH HOH . I 4 HOH A 53 58 58 HOH HOH . I 4 HOH A 54 59 59 HOH HOH . I 4 HOH A 55 60 60 HOH HOH . I 4 HOH A 56 62 62 HOH HOH . I 4 HOH A 57 65 65 HOH HOH . I 4 HOH A 58 66 66 HOH HOH . I 4 HOH A 59 67 67 HOH HOH . I 4 HOH A 60 68 68 HOH HOH . I 4 HOH A 61 69 69 HOH HOH . I 4 HOH A 62 70 70 HOH HOH . I 4 HOH A 63 71 71 HOH HOH . I 4 HOH A 64 72 72 HOH HOH . I 4 HOH A 65 73 73 HOH HOH . I 4 HOH A 66 74 74 HOH HOH . I 4 HOH A 67 75 75 HOH HOH . I 4 HOH A 68 76 76 HOH HOH . I 4 HOH A 69 77 77 HOH HOH . I 4 HOH A 70 79 79 HOH HOH . I 4 HOH A 71 80 80 HOH HOH . I 4 HOH A 72 81 81 HOH HOH . I 4 HOH A 73 82 82 HOH HOH . I 4 HOH A 74 83 83 HOH HOH . I 4 HOH A 75 84 84 HOH HOH . I 4 HOH A 76 85 85 HOH HOH . I 4 HOH A 77 86 86 HOH HOH . I 4 HOH A 78 87 87 HOH HOH . I 4 HOH A 79 88 88 HOH HOH . I 4 HOH A 80 89 89 HOH HOH . I 4 HOH A 81 91 91 HOH HOH . I 4 HOH A 82 92 92 HOH HOH . I 4 HOH A 83 94 94 HOH HOH . I 4 HOH A 84 95 95 HOH HOH . I 4 HOH A 85 96 96 HOH HOH . I 4 HOH A 86 501 1 HOH HOH . I 4 HOH A 87 502 97 HOH HOH . I 4 HOH A 88 503 98 HOH HOH . I 4 HOH A 89 504 99 HOH HOH . I 4 HOH A 90 505 100 HOH HOH . I 4 HOH A 91 506 104 HOH HOH . I 4 HOH A 92 507 105 HOH HOH . I 4 HOH A 93 508 106 HOH HOH . I 4 HOH A 94 509 107 HOH HOH . I 4 HOH A 95 510 108 HOH HOH . I 4 HOH A 96 511 109 HOH HOH . I 4 HOH A 97 512 110 HOH HOH . I 4 HOH A 98 513 111 HOH HOH . I 4 HOH A 99 514 112 HOH HOH . I 4 HOH A 100 515 113 HOH HOH . I 4 HOH A 101 516 114 HOH HOH . I 4 HOH A 102 517 115 HOH HOH . I 4 HOH A 103 518 116 HOH HOH . I 4 HOH A 104 519 117 HOH HOH . I 4 HOH A 105 520 118 HOH HOH . I 4 HOH A 106 521 119 HOH HOH . I 4 HOH A 107 522 120 HOH HOH . I 4 HOH A 108 523 121 HOH HOH . I 4 HOH A 109 524 122 HOH HOH . I 4 HOH A 110 525 123 HOH HOH . I 4 HOH A 111 526 124 HOH HOH . I 4 HOH A 112 527 125 HOH HOH . I 4 HOH A 113 528 126 HOH HOH . I 4 HOH A 114 529 127 HOH HOH . I 4 HOH A 115 530 128 HOH HOH . I 4 HOH A 116 531 129 HOH HOH . I 4 HOH A 117 532 130 HOH HOH . I 4 HOH A 118 533 132 HOH HOH . I 4 HOH A 119 534 133 HOH HOH . I 4 HOH A 120 535 134 HOH HOH . I 4 HOH A 121 536 135 HOH HOH . I 4 HOH A 122 537 136 HOH HOH . I 4 HOH A 123 538 137 HOH HOH . I 4 HOH A 124 539 138 HOH HOH . I 4 HOH A 125 540 139 HOH HOH . I 4 HOH A 126 541 140 HOH HOH . I 4 HOH A 127 542 141 HOH HOH . I 4 HOH A 128 543 142 HOH HOH . I 4 HOH A 129 544 144 HOH HOH . I 4 HOH A 130 545 145 HOH HOH . I 4 HOH A 131 546 146 HOH HOH . I 4 HOH A 132 547 149 HOH HOH . I 4 HOH A 133 548 150 HOH HOH . I 4 HOH A 134 549 153 HOH HOH . I 4 HOH A 135 550 154 HOH HOH . I 4 HOH A 136 551 155 HOH HOH . I 4 HOH A 137 552 156 HOH HOH . I 4 HOH A 138 553 157 HOH HOH . I 4 HOH A 139 554 158 HOH HOH . I 4 HOH A 140 555 159 HOH HOH . I 4 HOH A 141 556 160 HOH HOH . I 4 HOH A 142 557 161 HOH HOH . I 4 HOH A 143 558 162 HOH HOH . I 4 HOH A 144 559 163 HOH HOH . I 4 HOH A 145 560 164 HOH HOH . I 4 HOH A 146 561 166 HOH HOH . I 4 HOH A 147 562 167 HOH HOH . I 4 HOH A 148 563 168 HOH HOH . I 4 HOH A 149 564 169 HOH HOH . I 4 HOH A 150 565 170 HOH HOH . I 4 HOH A 151 566 171 HOH HOH . I 4 HOH A 152 567 172 HOH HOH . I 4 HOH A 153 568 173 HOH HOH . I 4 HOH A 154 569 174 HOH HOH . I 4 HOH A 155 570 175 HOH HOH . I 4 HOH A 156 571 176 HOH HOH . I 4 HOH A 157 572 177 HOH HOH . I 4 HOH A 158 573 178 HOH HOH . I 4 HOH A 159 574 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 2 5.623 -37.94 -5.268 1 36.43 ? C1 EDO 500 A 1 HETATM 2 O O1 EDO . . . H 2 4.453 -38.414 -4.572 1 37.68 ? O1 EDO 500 A 1 HETATM 3 C C2 EDO . . . H 2 6.904 -38.3 -4.517 1 36.87 ? C2 EDO 500 A 1 HETATM 4 O O2 EDO . . . H 2 7.514 -37.103 -3.999 1 38.59 ? O2 EDO 500 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #