data_3TGV # _model_server_result.job_id DyQuyKfGj6VBpHLjv315hA _model_server_result.datetime_utc '2025-02-27 01:53:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tgv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":160}' # _entry.id 3TGV # _exptl.entry_id 3TGV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.121 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZOIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TGV _cell.length_a 80.063 _cell.length_b 80.063 _cell.length_c 125.835 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TGV _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C7 H6 O2' _chem_comp.formula_weight 122.121 _chem_comp.id BEZ _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 BEZ doub 70 n n C O2 BEZ sing 71 n n C C1 BEZ sing 72 n n O2 HO2 BEZ sing 73 n n C1 C2 BEZ doub 74 n y C1 C6 BEZ sing 75 n y C2 C3 BEZ sing 76 n y C2 H2 BEZ sing 77 n n C3 C4 BEZ doub 78 n y C3 H3 BEZ sing 79 n n C4 C5 BEZ sing 80 n y C4 H4 BEZ sing 81 n n C5 C6 BEZ doub 82 n y C5 H5 BEZ sing 83 n n C6 H6 BEZ sing 84 n n # _atom_sites.entry_id 3TGV _atom_sites.fract_transf_matrix[1][1] 0.01249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01249 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BEZ B 1 1 1 BEZ BEZ . F 2 BEZ B 1 160 1 BEZ BEZ . G 2 BEZ C 1 1 1 BEZ BEZ . H 2 BEZ D 1 1 1 BEZ BEZ . I 3 HOH A 1 5 5 HOH HOH . I 3 HOH A 2 7 7 HOH HOH . I 3 HOH A 3 160 14 HOH HOH . I 3 HOH A 4 161 161 HOH HOH . I 3 HOH A 5 162 17 HOH HOH . I 3 HOH A 6 163 25 HOH HOH . I 3 HOH A 7 164 164 HOH HOH . I 3 HOH A 8 165 27 HOH HOH . I 3 HOH A 9 166 28 HOH HOH . I 3 HOH A 10 167 36 HOH HOH . I 3 HOH A 11 168 40 HOH HOH . I 3 HOH A 12 169 43 HOH HOH . I 3 HOH A 13 170 170 HOH HOH . I 3 HOH A 14 171 45 HOH HOH . I 3 HOH A 15 172 47 HOH HOH . I 3 HOH A 16 173 50 HOH HOH . I 3 HOH A 17 174 174 HOH HOH . I 3 HOH A 18 175 175 HOH HOH . I 3 HOH A 19 176 176 HOH HOH . I 3 HOH A 20 177 177 HOH HOH . I 3 HOH A 21 178 52 HOH HOH . I 3 HOH A 22 179 68 HOH HOH . I 3 HOH A 23 180 69 HOH HOH . I 3 HOH A 24 181 70 HOH HOH . I 3 HOH A 25 182 76 HOH HOH . I 3 HOH A 26 183 78 HOH HOH . I 3 HOH A 27 184 79 HOH HOH . I 3 HOH A 28 185 82 HOH HOH . I 3 HOH A 29 186 186 HOH HOH . I 3 HOH A 30 187 85 HOH HOH . I 3 HOH A 31 188 87 HOH HOH . I 3 HOH A 32 189 95 HOH HOH . I 3 HOH A 33 190 99 HOH HOH . I 3 HOH A 34 191 104 HOH HOH . I 3 HOH A 35 192 112 HOH HOH . I 3 HOH A 36 193 114 HOH HOH . I 3 HOH A 37 194 115 HOH HOH . I 3 HOH A 38 195 195 HOH HOH . I 3 HOH A 39 196 116 HOH HOH . I 3 HOH A 40 197 122 HOH HOH . I 3 HOH A 41 198 144 HOH HOH . I 3 HOH A 42 199 199 HOH HOH . I 3 HOH A 43 200 151 HOH HOH . I 3 HOH A 44 202 202 HOH HOH . I 3 HOH A 45 218 218 HOH HOH . I 3 HOH A 46 220 220 HOH HOH . I 3 HOH A 47 221 221 HOH HOH . I 3 HOH A 48 230 230 HOH HOH . I 3 HOH A 49 240 240 HOH HOH . I 3 HOH A 50 243 243 HOH HOH . I 3 HOH A 51 247 247 HOH HOH . I 3 HOH A 52 251 251 HOH HOH . I 3 HOH A 53 253 253 HOH HOH . I 3 HOH A 54 254 254 HOH HOH . I 3 HOH A 55 259 259 HOH HOH . I 3 HOH A 56 264 264 HOH HOH . I 3 HOH A 57 267 267 HOH HOH . J 3 HOH B 1 3 3 HOH HOH . J 3 HOH B 2 161 1 HOH HOH . J 3 HOH B 3 162 162 HOH HOH . J 3 HOH B 4 163 13 HOH HOH . J 3 HOH B 5 164 19 HOH HOH . J 3 HOH B 6 165 165 HOH HOH . J 3 HOH B 7 166 166 HOH HOH . J 3 HOH B 8 167 167 HOH HOH . J 3 HOH B 9 168 168 HOH HOH . J 3 HOH B 10 169 169 HOH HOH . J 3 HOH B 11 170 20 HOH HOH . J 3 HOH B 12 171 21 HOH HOH . J 3 HOH B 13 172 23 HOH HOH . J 3 HOH B 14 173 29 HOH HOH . J 3 HOH B 15 174 34 HOH HOH . J 3 HOH B 16 175 37 HOH HOH . J 3 HOH B 17 176 39 HOH HOH . J 3 HOH B 18 177 49 HOH HOH . J 3 HOH B 19 178 178 HOH HOH . J 3 HOH B 20 179 54 HOH HOH . J 3 HOH B 21 180 59 HOH HOH . J 3 HOH B 22 181 61 HOH HOH . J 3 HOH B 23 182 182 HOH HOH . J 3 HOH B 24 183 64 HOH HOH . J 3 HOH B 25 184 71 HOH HOH . J 3 HOH B 26 185 72 HOH HOH . J 3 HOH B 27 186 77 HOH HOH . J 3 HOH B 28 187 81 HOH HOH . J 3 HOH B 29 188 188 HOH HOH . J 3 HOH B 30 189 84 HOH HOH . J 3 HOH B 31 190 88 HOH HOH . J 3 HOH B 32 191 191 HOH HOH . J 3 HOH B 33 192 89 HOH HOH . J 3 HOH B 34 193 97 HOH HOH . J 3 HOH B 35 194 98 HOH HOH . J 3 HOH B 36 195 101 HOH HOH . J 3 HOH B 37 196 196 HOH HOH . J 3 HOH B 38 197 106 HOH HOH . J 3 HOH B 39 198 108 HOH HOH . J 3 HOH B 40 199 109 HOH HOH . J 3 HOH B 41 200 110 HOH HOH . J 3 HOH B 42 201 201 HOH HOH . J 3 HOH B 43 202 111 HOH HOH . J 3 HOH B 44 203 203 HOH HOH . J 3 HOH B 45 204 204 HOH HOH . J 3 HOH B 46 205 117 HOH HOH . J 3 HOH B 47 206 118 HOH HOH . J 3 HOH B 48 207 123 HOH HOH . J 3 HOH B 49 208 124 HOH HOH . J 3 HOH B 50 209 209 HOH HOH . J 3 HOH B 51 210 210 HOH HOH . J 3 HOH B 52 211 135 HOH HOH . J 3 HOH B 53 212 140 HOH HOH . J 3 HOH B 54 213 142 HOH HOH . J 3 HOH B 55 214 149 HOH HOH . J 3 HOH B 56 215 152 HOH HOH . J 3 HOH B 57 216 153 HOH HOH . J 3 HOH B 58 217 158 HOH HOH . J 3 HOH B 59 218 159 HOH HOH . J 3 HOH B 60 219 219 HOH HOH . J 3 HOH B 61 222 222 HOH HOH . J 3 HOH B 62 225 225 HOH HOH . J 3 HOH B 63 229 229 HOH HOH . J 3 HOH B 64 231 231 HOH HOH . J 3 HOH B 65 232 232 HOH HOH . J 3 HOH B 66 233 233 HOH HOH . J 3 HOH B 67 234 234 HOH HOH . J 3 HOH B 68 236 236 HOH HOH . J 3 HOH B 69 237 237 HOH HOH . J 3 HOH B 70 238 238 HOH HOH . J 3 HOH B 71 245 245 HOH HOH . J 3 HOH B 72 246 246 HOH HOH . J 3 HOH B 73 250 250 HOH HOH . J 3 HOH B 74 257 257 HOH HOH . J 3 HOH B 75 260 260 HOH HOH . J 3 HOH B 76 265 265 HOH HOH . J 3 HOH B 77 270 270 HOH HOH . K 3 HOH C 1 2 2 HOH HOH . K 3 HOH C 2 8 8 HOH HOH . K 3 HOH C 3 10 10 HOH HOH . K 3 HOH C 4 160 12 HOH HOH . K 3 HOH C 5 161 16 HOH HOH . K 3 HOH C 6 162 26 HOH HOH . K 3 HOH C 7 163 163 HOH HOH . K 3 HOH C 8 164 30 HOH HOH . K 3 HOH C 9 165 32 HOH HOH . K 3 HOH C 10 166 42 HOH HOH . K 3 HOH C 11 167 44 HOH HOH . K 3 HOH C 12 168 46 HOH HOH . K 3 HOH C 13 169 55 HOH HOH . K 3 HOH C 14 170 56 HOH HOH . K 3 HOH C 15 171 67 HOH HOH . K 3 HOH C 16 172 172 HOH HOH . K 3 HOH C 17 173 173 HOH HOH . K 3 HOH C 18 174 75 HOH HOH . K 3 HOH C 19 175 80 HOH HOH . K 3 HOH C 20 176 86 HOH HOH . K 3 HOH C 21 177 90 HOH HOH . K 3 HOH C 22 178 91 HOH HOH . K 3 HOH C 23 179 179 HOH HOH . K 3 HOH C 24 180 92 HOH HOH . K 3 HOH C 25 181 100 HOH HOH . K 3 HOH C 26 182 103 HOH HOH . K 3 HOH C 27 183 183 HOH HOH . K 3 HOH C 28 184 105 HOH HOH . K 3 HOH C 29 185 185 HOH HOH . K 3 HOH C 30 186 113 HOH HOH . K 3 HOH C 31 187 125 HOH HOH . K 3 HOH C 32 188 126 HOH HOH . K 3 HOH C 33 189 189 HOH HOH . K 3 HOH C 34 190 127 HOH HOH . K 3 HOH C 35 191 128 HOH HOH . K 3 HOH C 36 192 192 HOH HOH . K 3 HOH C 37 193 193 HOH HOH . K 3 HOH C 38 194 131 HOH HOH . K 3 HOH C 39 195 133 HOH HOH . K 3 HOH C 40 196 139 HOH HOH . K 3 HOH C 41 197 141 HOH HOH . K 3 HOH C 42 198 198 HOH HOH . K 3 HOH C 43 199 143 HOH HOH . K 3 HOH C 44 200 145 HOH HOH . K 3 HOH C 45 201 146 HOH HOH . K 3 HOH C 46 202 150 HOH HOH . K 3 HOH C 47 206 206 HOH HOH . K 3 HOH C 48 207 207 HOH HOH . K 3 HOH C 49 211 211 HOH HOH . K 3 HOH C 50 212 212 HOH HOH . K 3 HOH C 51 214 214 HOH HOH . K 3 HOH C 52 216 216 HOH HOH . K 3 HOH C 53 224 224 HOH HOH . K 3 HOH C 54 235 235 HOH HOH . K 3 HOH C 55 241 241 HOH HOH . K 3 HOH C 56 242 242 HOH HOH . K 3 HOH C 57 249 249 HOH HOH . K 3 HOH C 58 256 256 HOH HOH . K 3 HOH C 59 261 261 HOH HOH . K 3 HOH C 60 263 263 HOH HOH . K 3 HOH C 61 266 266 HOH HOH . K 3 HOH C 62 268 268 HOH HOH . K 3 HOH C 63 269 269 HOH HOH . K 3 HOH C 64 271 271 HOH HOH . L 3 HOH D 1 4 4 HOH HOH . L 3 HOH D 2 6 6 HOH HOH . L 3 HOH D 3 9 9 HOH HOH . L 3 HOH D 4 11 11 HOH HOH . L 3 HOH D 5 160 160 HOH HOH . L 3 HOH D 6 161 15 HOH HOH . L 3 HOH D 7 162 18 HOH HOH . L 3 HOH D 8 163 22 HOH HOH . L 3 HOH D 9 164 24 HOH HOH . L 3 HOH D 10 165 31 HOH HOH . L 3 HOH D 11 166 33 HOH HOH . L 3 HOH D 12 167 35 HOH HOH . L 3 HOH D 13 168 38 HOH HOH . L 3 HOH D 14 169 41 HOH HOH . L 3 HOH D 15 170 48 HOH HOH . L 3 HOH D 16 171 171 HOH HOH . L 3 HOH D 17 172 51 HOH HOH . L 3 HOH D 18 173 53 HOH HOH . L 3 HOH D 19 174 57 HOH HOH . L 3 HOH D 20 175 58 HOH HOH . L 3 HOH D 21 176 60 HOH HOH . L 3 HOH D 22 177 62 HOH HOH . L 3 HOH D 23 178 63 HOH HOH . L 3 HOH D 24 179 65 HOH HOH . L 3 HOH D 25 180 180 HOH HOH . L 3 HOH D 26 181 181 HOH HOH . L 3 HOH D 27 182 66 HOH HOH . L 3 HOH D 28 183 73 HOH HOH . L 3 HOH D 29 184 184 HOH HOH . L 3 HOH D 30 185 74 HOH HOH . L 3 HOH D 31 186 83 HOH HOH . L 3 HOH D 32 187 187 HOH HOH . L 3 HOH D 33 188 93 HOH HOH . L 3 HOH D 34 189 94 HOH HOH . L 3 HOH D 35 190 190 HOH HOH . L 3 HOH D 36 191 96 HOH HOH . L 3 HOH D 37 192 102 HOH HOH . L 3 HOH D 38 193 107 HOH HOH . L 3 HOH D 39 194 194 HOH HOH . L 3 HOH D 40 195 119 HOH HOH . L 3 HOH D 41 196 120 HOH HOH . L 3 HOH D 42 197 197 HOH HOH . L 3 HOH D 43 198 121 HOH HOH . L 3 HOH D 44 199 129 HOH HOH . L 3 HOH D 45 200 200 HOH HOH . L 3 HOH D 46 201 130 HOH HOH . L 3 HOH D 47 202 132 HOH HOH . L 3 HOH D 48 203 134 HOH HOH . L 3 HOH D 49 204 136 HOH HOH . L 3 HOH D 50 205 205 HOH HOH . L 3 HOH D 51 206 137 HOH HOH . L 3 HOH D 52 207 138 HOH HOH . L 3 HOH D 53 208 208 HOH HOH . L 3 HOH D 54 209 147 HOH HOH . L 3 HOH D 55 210 148 HOH HOH . L 3 HOH D 56 211 154 HOH HOH . L 3 HOH D 57 212 155 HOH HOH . L 3 HOH D 58 213 213 HOH HOH . L 3 HOH D 59 214 156 HOH HOH . L 3 HOH D 60 215 215 HOH HOH . L 3 HOH D 61 216 157 HOH HOH . L 3 HOH D 62 217 217 HOH HOH . L 3 HOH D 63 223 223 HOH HOH . L 3 HOH D 64 226 226 HOH HOH . L 3 HOH D 65 227 227 HOH HOH . L 3 HOH D 66 228 228 HOH HOH . L 3 HOH D 67 239 239 HOH HOH . L 3 HOH D 68 244 244 HOH HOH . L 3 HOH D 69 248 248 HOH HOH . L 3 HOH D 70 252 252 HOH HOH . L 3 HOH D 71 255 255 HOH HOH . L 3 HOH D 72 258 258 HOH HOH . L 3 HOH D 73 262 262 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C BEZ . . . F 2 17.943 -5.533 -13.912 1 34.62 ? C BEZ 160 B 1 HETATM 2 O O1 BEZ . . . F 2 17.798 -6.56 -14.987 1 41.52 ? O1 BEZ 160 B 1 HETATM 3 O O2 BEZ . . . F 2 19.149 -5.37 -13.274 1 38.36 ? O2 BEZ 160 B 1 HETATM 4 C C1 BEZ . . . F 2 16.788 -4.696 -13.55 1 35.2 ? C1 BEZ 160 B 1 HETATM 5 C C2 BEZ . . . F 2 16.821 -3.902 -12.354 1 33.15 ? C2 BEZ 160 B 1 HETATM 6 C C3 BEZ . . . F 2 15.744 -3.121 -12.011 1 36.13 ? C3 BEZ 160 B 1 HETATM 7 C C4 BEZ . . . F 2 14.578 -3.092 -12.867 1 34.37 ? C4 BEZ 160 B 1 HETATM 8 C C5 BEZ . . . F 2 14.549 -3.881 -14.041 1 31.14 ? C5 BEZ 160 B 1 HETATM 9 C C6 BEZ . . . F 2 15.664 -4.683 -14.376 1 30.74 ? C6 BEZ 160 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #