data_3TH1
#
_model_server_result.job_id            TZjBjvyioX86ZuzWjya6ng 
_model_server_result.datetime_utc      '2025-02-28 13:33:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3th1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":301}' 
#
_entry.id    3TH1 
#
_exptl.entry_id    3TH1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              152.235 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DITHIANE DIOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3TH1 
_cell.length_a            97.57 
_cell.length_b            97.57 
_cell.length_c            423.6 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TH1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,P 1 1,2 
B,J,K,L,M,N,Q 2 1 
C,O,R 2 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
3 'crystal symmetry operation' 5_554 y,-x+y,z-1/6 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -70.6 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 130 A TYR 130 1_555 D FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc2 A OH TYR 164 A TYR 164 1_555 D FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc3 A NE2 HIS 188 A HIS 188 1_555 D FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc4 A NE2 HIS 190 A HIS 190 1_555 D FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc5 B OH TYR 130 B TYR 130 1_555 K FE FE . B FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? 
metalc ? metalc6 B OH TYR 164 B TYR 164 1_555 K FE FE . B FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
metalc ? metalc7 B NE2 HIS 188 B HIS 188 1_555 K FE FE . B FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc8 C OH TYR 130 C TYR 130 1_555 O FE FE . C FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc9 C OH TYR 164 C TYR 164 1_555 O FE FE . C FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? 
metalc ? metalc10 C NE2 HIS 188 C HIS 188 1_555 O FE FE . C FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc11 C NE2 HIS 190 C HIS 190 1_555 O FE FE . C FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
#
_chem_comp.formula           'C4 H8 O2 S2' 
_chem_comp.formula_weight    152.235 
_chem_comp.id                DTD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DITHIANE DIOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTD sing 213 n n 
S1 S4 DTD sing 214 n n 
C1 C2 DTD sing 215 n n 
C1 H11 DTD sing 216 n n 
C1 H12 DTD sing 217 n n 
C2 O2 DTD sing 218 n n 
C2 C3 DTD sing 219 n n 
C2 H21 DTD sing 220 n n 
O2 HO2 DTD sing 221 n n 
C3 O3 DTD sing 222 n n 
C3 C4 DTD sing 223 n n 
C3 H31 DTD sing 224 n n 
O3 HO3 DTD sing 225 n n 
C4 S4 DTD sing 226 n n 
C4 H41 DTD sing 227 n n 
C4 H42 DTD sing 228 n n 
#
_atom_sites.entry_id                     3TH1 
_atom_sites.fract_transf_matrix[1][1]    0.010249 
_atom_sites.fract_transf_matrix[1][2]    0.005917 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011835 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002361 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FE A 1 300 300 FE FE . 
E 3 DTD A 1 301 301 DTD DTD . 
F 4 3PH A 1 302 302 3PH 3PH . 
G 5 MG A 1 303 303 MG MG . 
H 5 MG A 1 304 304 MG MG . 
I 6 ACT A 1 305 305 ACT ACT . 
J 7 GOL B 1 306 306 GOL GOL . 
K 2 FE B 1 300 300 FE FE . 
L 3 DTD B 1 301 301 DTD DTD . 
M 4 3PH B 1 302 302 3PH 3PH . 
N 7 GOL B 1 303 303 GOL GOL . 
O 2 FE C 1 300 300 FE FE . 
P 8 HOH A 1 261 261 HOH HOH . 
P 8 HOH A 2 262 262 HOH HOH . 
P 8 HOH A 3 263 263 HOH HOH . 
P 8 HOH A 4 264 264 HOH HOH . 
P 8 HOH A 5 265 265 HOH HOH . 
P 8 HOH A 6 266 266 HOH HOH . 
P 8 HOH A 7 267 267 HOH HOH . 
P 8 HOH A 8 268 268 HOH HOH . 
Q 8 HOH B 1 261 261 HOH HOH . 
Q 8 HOH B 2 262 262 HOH HOH . 
Q 8 HOH B 3 263 263 HOH HOH . 
R 8 HOH C 1 261 261 HOH HOH . 
R 8 HOH C 2 262 262 HOH HOH . 
R 8 HOH C 3 263 263 HOH HOH . 
R 8 HOH C 4 264 264 HOH HOH . 
R 8 HOH C 5 265 265 HOH HOH . 
R 8 HOH C 6 266 266 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTD . . . L 3 44.691 -31.902 -13.89 1 96.27 ? S1 DTD 301 B 1 
HETATM 2 C C1 DTD . . . L 3 46.34 -31.129 -13.716 1 70.48 ? C1 DTD 301 B 1 
HETATM 3 C C2 DTD . . . L 3 47.167 -31.733 -12.579 1 72.92 ? C2 DTD 301 B 1 
HETATM 4 O O2 DTD . . . L 3 48.333 -30.935 -12.36 1 73.66 ? O2 DTD 301 B 1 
HETATM 5 C C3 DTD . . . L 3 47.583 -33.168 -12.906 1 74.64 ? C3 DTD 301 B 1 
HETATM 6 O O3 DTD . . . L 3 48.664 -33.558 -12.055 1 75.28 ? O3 DTD 301 B 1 
HETATM 7 C C4 DTD . . . L 3 46.412 -34.135 -12.721 1 74.31 ? C4 DTD 301 B 1 
HETATM 8 S S4 DTD . . . L 3 45.088 -33.901 -13.962 1 188.53 ? S4 DTD 301 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#