data_3TH8 # _model_server_result.job_id tp6WxsWAVvZEjiPivle3mA _model_server_result.datetime_utc '2024-11-26 03:42:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3th8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":289}' # _entry.id 3TH8 # _exptl.entry_id 3TH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2Z)-4-({3-[3-(hexyloxy)phenyl]propyl}amino)-2-hydroxy-4-oxobut-2-enoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TH8 _cell.length_a 62.603 _cell.length_b 68.862 _cell.length_c 112.297 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H27 N O5' _chem_comp.formula_weight 349.421 _chem_comp.id TH9 _chem_comp.mon_nstd_flag . _chem_comp.name '(2Z)-4-({3-[3-(hexyloxy)phenyl]propyl}amino)-2-hydroxy-4-oxobut-2-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BPH-1063 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAK TH9 sing 290 n n OAB CAU TH9 doub 291 n n CAF CAV TH9 sing 292 n n CAF CAW TH9 doub 293 z n CAG CAH TH9 doub 294 n y CAG CAI TH9 sing 295 n y CAH CAX TH9 sing 296 n y CAI CAY TH9 doub 297 n y CAL CAK TH9 sing 298 n n CAL CAM TH9 sing 299 n n CAM CAN TH9 sing 300 n n CAP CAO TH9 sing 301 n n CAQ CAN TH9 sing 302 n n CAR CAO TH9 sing 303 n n NAS CAP TH9 sing 304 n n NAS CAV TH9 sing 305 n n OAT CAQ TH9 sing 306 n n CAU OAD TH9 sing 307 n n CAU CAW TH9 sing 308 n n CAV OAC TH9 doub 309 n n CAW OAE TH9 sing 310 n n CAX CAJ TH9 doub 311 n y CAX CAR TH9 sing 312 n n CAY CAJ TH9 sing 313 n y CAY OAT TH9 sing 314 n n CAA H1 TH9 sing 315 n n CAA H2 TH9 sing 316 n n CAA H3 TH9 sing 317 n n OAD H4 TH9 sing 318 n n OAE H5 TH9 sing 319 n n CAF H6 TH9 sing 320 n n CAG H7 TH9 sing 321 n n CAH H8 TH9 sing 322 n n CAI H9 TH9 sing 323 n n CAJ H10 TH9 sing 324 n n CAK H11 TH9 sing 325 n n CAK H12 TH9 sing 326 n n CAL H13 TH9 sing 327 n n CAL H14 TH9 sing 328 n n CAM H15 TH9 sing 329 n n CAM H16 TH9 sing 330 n n CAN H17 TH9 sing 331 n n CAN H18 TH9 sing 332 n n CAO H19 TH9 sing 333 n n CAO H20 TH9 sing 334 n n CAP H21 TH9 sing 335 n n CAP H22 TH9 sing 336 n n CAQ H23 TH9 sing 337 n n CAQ H24 TH9 sing 338 n n CAR H25 TH9 sing 339 n n CAR H26 TH9 sing 340 n n NAS H27 TH9 sing 341 n n # _atom_sites.entry_id 3TH8 _atom_sites.fract_transf_matrix[1][1] 0.015974 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TH9 B 1 289 1 TH9 TH9 . D 3 HOH B 1 290 1 HOH HOH . D 3 HOH B 2 291 3 HOH HOH . D 3 HOH B 3 292 4 HOH HOH . D 3 HOH B 4 293 5 HOH HOH . D 3 HOH B 5 294 6 HOH HOH . D 3 HOH B 6 295 9 HOH HOH . D 3 HOH B 7 296 12 HOH HOH . D 3 HOH B 8 297 14 HOH HOH . D 3 HOH B 9 298 17 HOH HOH . D 3 HOH B 10 299 18 HOH HOH . D 3 HOH B 11 300 21 HOH HOH . D 3 HOH B 12 301 25 HOH HOH . D 3 HOH B 13 302 30 HOH HOH . D 3 HOH B 14 303 31 HOH HOH . D 3 HOH B 15 304 40 HOH HOH . D 3 HOH B 16 305 42 HOH HOH . D 3 HOH B 17 306 48 HOH HOH . D 3 HOH B 18 307 55 HOH HOH . D 3 HOH B 19 308 56 HOH HOH . D 3 HOH B 20 309 57 HOH HOH . D 3 HOH B 21 310 65 HOH HOH . D 3 HOH B 22 311 66 HOH HOH . D 3 HOH B 23 312 71 HOH HOH . D 3 HOH B 24 313 72 HOH HOH . D 3 HOH B 25 314 73 HOH HOH . D 3 HOH B 26 315 74 HOH HOH . D 3 HOH B 27 316 75 HOH HOH . D 3 HOH B 28 317 83 HOH HOH . D 3 HOH B 29 318 84 HOH HOH . D 3 HOH B 30 319 127 HOH HOH . D 3 HOH B 31 320 244 HOH HOH . D 3 HOH B 32 321 245 HOH HOH . D 3 HOH B 33 322 246 HOH HOH . D 3 HOH B 34 323 249 HOH HOH . E 3 HOH A 1 289 2 HOH HOH . E 3 HOH A 2 290 7 HOH HOH . E 3 HOH A 3 291 8 HOH HOH . E 3 HOH A 4 292 11 HOH HOH . E 3 HOH A 5 293 15 HOH HOH . E 3 HOH A 6 294 26 HOH HOH . E 3 HOH A 7 295 27 HOH HOH . E 3 HOH A 8 296 32 HOH HOH . E 3 HOH A 9 297 34 HOH HOH . E 3 HOH A 10 298 36 HOH HOH . E 3 HOH A 11 299 38 HOH HOH . E 3 HOH A 12 300 41 HOH HOH . E 3 HOH A 13 301 45 HOH HOH . E 3 HOH A 14 302 50 HOH HOH . E 3 HOH A 15 303 52 HOH HOH . E 3 HOH A 16 304 63 HOH HOH . E 3 HOH A 17 305 64 HOH HOH . E 3 HOH A 18 306 67 HOH HOH . E 3 HOH A 19 307 68 HOH HOH . E 3 HOH A 20 308 85 HOH HOH . E 3 HOH A 21 309 86 HOH HOH . E 3 HOH A 22 310 89 HOH HOH . E 3 HOH A 23 311 90 HOH HOH . E 3 HOH A 24 312 106 HOH HOH . E 3 HOH A 25 313 114 HOH HOH . E 3 HOH A 26 314 115 HOH HOH . E 3 HOH A 27 315 125 HOH HOH . E 3 HOH A 28 316 172 HOH HOH . E 3 HOH A 29 317 251 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA TH9 . . . C 2 -13.081 -4.1 -0.272 1 61.81 ? CAA TH9 289 B 1 HETATM 2 O OAB TH9 . . . C 2 -3.614 9.278 -2.007 1 49.24 ? OAB TH9 289 B 1 HETATM 3 O OAC TH9 . . . C 2 -6.62 6.611 0.677 1 55.88 ? OAC TH9 289 B 1 HETATM 4 O OAD TH9 . . . C 2 -2.909 10.188 -0.147 1 61.48 ? OAD TH9 289 B 1 HETATM 5 O OAE TH9 . . . C 2 -4.713 8.56 1.227 1 51.26 ? OAE TH9 289 B 1 HETATM 6 C CAF TH9 . . . C 2 -5.404 7.616 -1.069 1 56.16 ? CAF TH9 289 B 1 HETATM 7 C CAG TH9 . . . C 2 -10.867 2.485 -3.944 1 43.28 ? CAG TH9 289 B 1 HETATM 8 C CAH TH9 . . . C 2 -9.509 2.668 -3.694 1 39.94 ? CAH TH9 289 B 1 HETATM 9 C CAI TH9 . . . C 2 -11.669 1.908 -2.968 1 46.75 ? CAI TH9 289 B 1 HETATM 10 C CAJ TH9 . . . C 2 -9.726 1.72 -1.499 1 42.99 ? CAJ TH9 289 B 1 HETATM 11 C CAK TH9 . . . C 2 -13.914 -3.039 0.479 1 62.27 ? CAK TH9 289 B 1 HETATM 12 C CAL TH9 . . . C 2 -13.489 -1.604 0.118 1 60.53 ? CAL TH9 289 B 1 HETATM 13 C CAM TH9 . . . C 2 -12.184 -1.171 0.813 1 60.97 ? CAM TH9 289 B 1 HETATM 14 C CAN TH9 . . . C 2 -12.345 0.233 1.453 1 59.13 ? CAN TH9 289 B 1 HETATM 15 C CAO TH9 . . . C 2 -7.222 3.568 -1.182 1 43.49 ? CAO TH9 289 B 1 HETATM 16 C CAP TH9 . . . C 2 -8.026 4.903 -1.226 1 45.38 ? CAP TH9 289 B 1 HETATM 17 C CAQ TH9 . . . C 2 -11.699 1.308 0.565 1 56.56 ? CAQ TH9 289 B 1 HETATM 18 C CAR TH9 . . . C 2 -7.555 2.528 -2.303 1 41.84 ? CAR TH9 289 B 1 HETATM 19 N NAS TH9 . . . C 2 -7.063 5.983 -1.466 1 50.61 ? NAS TH9 289 B 1 HETATM 20 O OAT TH9 . . . C 2 -11.94 0.972 -0.813 1 53.99 ? OAT TH9 289 B 1 HETATM 21 C CAU TH9 . . . C 2 -3.646 9.378 -0.79 1 54.76 ? CAU TH9 289 B 1 HETATM 22 C CAV TH9 . . . C 2 -6.451 6.698 -0.524 1 52.68 ? CAV TH9 289 B 1 HETATM 23 C CAW TH9 . . . C 2 -4.597 8.497 -0.118 1 53.38 ? CAW TH9 289 B 1 HETATM 24 C CAX TH9 . . . C 2 -8.932 2.306 -2.488 1 40.58 ? CAX TH9 289 B 1 HETATM 25 C CAY TH9 . . . C 2 -11.1 1.532 -1.743 1 48.56 ? CAY TH9 289 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #