data_3THE # _model_server_result.job_id -J0zfsh79vju18ZibwYAFg _model_server_result.datetime_utc '2024-12-03 14:18:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3the # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 3THE # _exptl.entry_id 3THE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3THE _cell.length_a 87.418 _cell.length_b 87.418 _cell.length_c 67.253 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3THE _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1,2,3 B,F,G,H,J 2 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 43.709 75.706209 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -43.709 75.706209 0 4 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -43.709 75.706209 0 5 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -87.418 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 101 A HIS 101 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc2 A OD1 ASP 124 A ASP 124 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc3 A OD2 ASP 124 A ASP 124 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc4 A ND1 HIS 126 A HIS 126 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc5 A OD2 ASP 128 A ASP 128 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc6 A OD2 ASP 232 A ASP 232 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 A OD2 ASP 232 A ASP 232 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc8 A OD1 ASP 234 A ASP 234 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc9 A OD2 ASP 234 A ASP 234 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc10 I O HOH . A HOH 323 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc11 I O HOH . A HOH 324 1_555 C CO CO . A CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc12 I O HOH . A HOH 324 1_555 D CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc13 B ND1 HIS 101 B HIS 101 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc14 B OD1 ASP 124 B ASP 124 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc15 B OD2 ASP 124 B ASP 124 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc16 B ND1 HIS 126 B HIS 126 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc17 B OD2 ASP 128 B ASP 128 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc18 B OD2 ASP 232 B ASP 232 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc19 B OD2 ASP 232 B ASP 232 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc20 B OD1 ASP 234 B ASP 234 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc21 B OD2 ASP 234 B ASP 234 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc22 J O HOH . B HOH 323 1_555 F CO CO . B CO 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc23 J O HOH . B HOH 323 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc24 J O HOH . B HOH 324 1_555 G CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3THE _atom_sites.fract_transf_matrix[1][1] 0.011439 _atom_sites.fract_transf_matrix[1][2] 0.006604 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013209 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014869 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 400 400 CO CO . D 2 CO A 1 401 401 CO CO . E 3 BCN A 1 500 500 BCN BCN . F 2 CO B 1 400 400 CO CO . G 2 CO B 1 401 401 CO CO . H 3 BCN B 1 500 500 BCN BCN . I 4 HOH A 1 323 1 HOH HOH . I 4 HOH A 2 324 2 HOH HOH . I 4 HOH A 3 325 7 HOH HOH . I 4 HOH A 4 326 9 HOH HOH . I 4 HOH A 5 327 10 HOH HOH . I 4 HOH A 6 328 13 HOH HOH . I 4 HOH A 7 329 14 HOH HOH . I 4 HOH A 8 330 16 HOH HOH . I 4 HOH A 9 331 17 HOH HOH . I 4 HOH A 10 332 18 HOH HOH . I 4 HOH A 11 333 19 HOH HOH . I 4 HOH A 12 334 20 HOH HOH . I 4 HOH A 13 335 22 HOH HOH . I 4 HOH A 14 336 24 HOH HOH . I 4 HOH A 15 337 26 HOH HOH . I 4 HOH A 16 338 29 HOH HOH . I 4 HOH A 17 339 30 HOH HOH . I 4 HOH A 18 340 34 HOH HOH . I 4 HOH A 19 341 36 HOH HOH . I 4 HOH A 20 342 37 HOH HOH . I 4 HOH A 21 343 39 HOH HOH . I 4 HOH A 22 344 41 HOH HOH . I 4 HOH A 23 345 43 HOH HOH . I 4 HOH A 24 346 44 HOH HOH . I 4 HOH A 25 347 47 HOH HOH . I 4 HOH A 26 348 51 HOH HOH . I 4 HOH A 27 349 53 HOH HOH . I 4 HOH A 28 350 54 HOH HOH . I 4 HOH A 29 351 55 HOH HOH . I 4 HOH A 30 352 57 HOH HOH . I 4 HOH A 31 353 60 HOH HOH . I 4 HOH A 32 354 61 HOH HOH . I 4 HOH A 33 355 62 HOH HOH . I 4 HOH A 34 356 65 HOH HOH . I 4 HOH A 35 357 69 HOH HOH . I 4 HOH A 36 358 70 HOH HOH . I 4 HOH A 37 359 72 HOH HOH . I 4 HOH A 38 360 74 HOH HOH . I 4 HOH A 39 361 76 HOH HOH . I 4 HOH A 40 362 79 HOH HOH . I 4 HOH A 41 363 80 HOH HOH . I 4 HOH A 42 364 81 HOH HOH . I 4 HOH A 43 365 83 HOH HOH . I 4 HOH A 44 366 85 HOH HOH . I 4 HOH A 45 367 86 HOH HOH . I 4 HOH A 46 368 88 HOH HOH . I 4 HOH A 47 369 89 HOH HOH . I 4 HOH A 48 370 92 HOH HOH . I 4 HOH A 49 371 95 HOH HOH . I 4 HOH A 50 372 96 HOH HOH . I 4 HOH A 51 373 98 HOH HOH . I 4 HOH A 52 374 99 HOH HOH . I 4 HOH A 53 375 106 HOH HOH . I 4 HOH A 54 376 107 HOH HOH . I 4 HOH A 55 377 109 HOH HOH . I 4 HOH A 56 378 111 HOH HOH . I 4 HOH A 57 379 112 HOH HOH . I 4 HOH A 58 380 113 HOH HOH . I 4 HOH A 59 381 114 HOH HOH . I 4 HOH A 60 382 115 HOH HOH . I 4 HOH A 61 383 117 HOH HOH . I 4 HOH A 62 384 119 HOH HOH . I 4 HOH A 63 385 120 HOH HOH . I 4 HOH A 64 386 121 HOH HOH . I 4 HOH A 65 387 123 HOH HOH . I 4 HOH A 66 388 125 HOH HOH . I 4 HOH A 67 389 126 HOH HOH . I 4 HOH A 68 390 127 HOH HOH . I 4 HOH A 69 391 128 HOH HOH . I 4 HOH A 70 392 130 HOH HOH . I 4 HOH A 71 393 132 HOH HOH . I 4 HOH A 72 394 133 HOH HOH . I 4 HOH A 73 395 139 HOH HOH . I 4 HOH A 74 396 141 HOH HOH . I 4 HOH A 75 397 142 HOH HOH . I 4 HOH A 76 398 146 HOH HOH . I 4 HOH A 77 399 149 HOH HOH . I 4 HOH A 78 402 150 HOH HOH . I 4 HOH A 79 403 152 HOH HOH . I 4 HOH A 80 404 155 HOH HOH . I 4 HOH A 81 405 156 HOH HOH . I 4 HOH A 82 406 158 HOH HOH . I 4 HOH A 83 407 159 HOH HOH . I 4 HOH A 84 408 161 HOH HOH . I 4 HOH A 85 409 164 HOH HOH . I 4 HOH A 86 410 165 HOH HOH . I 4 HOH A 87 411 166 HOH HOH . I 4 HOH A 88 412 168 HOH HOH . I 4 HOH A 89 413 169 HOH HOH . I 4 HOH A 90 414 171 HOH HOH . I 4 HOH A 91 415 172 HOH HOH . I 4 HOH A 92 416 173 HOH HOH . I 4 HOH A 93 417 174 HOH HOH . I 4 HOH A 94 418 175 HOH HOH . I 4 HOH A 95 419 176 HOH HOH . I 4 HOH A 96 420 177 HOH HOH . I 4 HOH A 97 421 178 HOH HOH . I 4 HOH A 98 422 180 HOH HOH . I 4 HOH A 99 423 181 HOH HOH . I 4 HOH A 100 424 182 HOH HOH . I 4 HOH A 101 425 183 HOH HOH . I 4 HOH A 102 426 184 HOH HOH . I 4 HOH A 103 427 185 HOH HOH . I 4 HOH A 104 428 186 HOH HOH . I 4 HOH A 105 429 187 HOH HOH . I 4 HOH A 106 430 188 HOH HOH . I 4 HOH A 107 431 189 HOH HOH . I 4 HOH A 108 432 190 HOH HOH . I 4 HOH A 109 433 191 HOH HOH . I 4 HOH A 110 434 192 HOH HOH . I 4 HOH A 111 435 193 HOH HOH . I 4 HOH A 112 436 195 HOH HOH . I 4 HOH A 113 437 196 HOH HOH . I 4 HOH A 114 438 211 HOH HOH . I 4 HOH A 115 439 212 HOH HOH . J 4 HOH B 1 323 3 HOH HOH . J 4 HOH B 2 324 4 HOH HOH . J 4 HOH B 3 325 5 HOH HOH . J 4 HOH B 4 326 6 HOH HOH . J 4 HOH B 5 327 8 HOH HOH . J 4 HOH B 6 328 11 HOH HOH . J 4 HOH B 7 329 12 HOH HOH . J 4 HOH B 8 330 15 HOH HOH . J 4 HOH B 9 331 21 HOH HOH . J 4 HOH B 10 332 23 HOH HOH . J 4 HOH B 11 333 25 HOH HOH . J 4 HOH B 12 334 27 HOH HOH . J 4 HOH B 13 335 28 HOH HOH . J 4 HOH B 14 336 31 HOH HOH . J 4 HOH B 15 337 32 HOH HOH . J 4 HOH B 16 338 33 HOH HOH . J 4 HOH B 17 339 35 HOH HOH . J 4 HOH B 18 340 38 HOH HOH . J 4 HOH B 19 341 40 HOH HOH . J 4 HOH B 20 342 42 HOH HOH . J 4 HOH B 21 343 45 HOH HOH . J 4 HOH B 22 344 46 HOH HOH . J 4 HOH B 23 345 48 HOH HOH . J 4 HOH B 24 346 49 HOH HOH . J 4 HOH B 25 347 50 HOH HOH . J 4 HOH B 26 348 52 HOH HOH . J 4 HOH B 27 349 56 HOH HOH . J 4 HOH B 28 350 58 HOH HOH . J 4 HOH B 29 351 59 HOH HOH . J 4 HOH B 30 352 63 HOH HOH . J 4 HOH B 31 353 64 HOH HOH . J 4 HOH B 32 354 66 HOH HOH . J 4 HOH B 33 355 67 HOH HOH . J 4 HOH B 34 356 68 HOH HOH . J 4 HOH B 35 357 71 HOH HOH . J 4 HOH B 36 358 73 HOH HOH . J 4 HOH B 37 359 75 HOH HOH . J 4 HOH B 38 360 77 HOH HOH . J 4 HOH B 39 361 78 HOH HOH . J 4 HOH B 40 362 82 HOH HOH . J 4 HOH B 41 363 84 HOH HOH . J 4 HOH B 42 364 87 HOH HOH . J 4 HOH B 43 365 90 HOH HOH . J 4 HOH B 44 366 91 HOH HOH . J 4 HOH B 45 367 93 HOH HOH . J 4 HOH B 46 368 94 HOH HOH . J 4 HOH B 47 369 97 HOH HOH . J 4 HOH B 48 370 100 HOH HOH . J 4 HOH B 49 371 101 HOH HOH . J 4 HOH B 50 372 102 HOH HOH . J 4 HOH B 51 373 103 HOH HOH . J 4 HOH B 52 374 104 HOH HOH . J 4 HOH B 53 375 105 HOH HOH . J 4 HOH B 54 376 108 HOH HOH . J 4 HOH B 55 377 110 HOH HOH . J 4 HOH B 56 378 116 HOH HOH . J 4 HOH B 57 379 118 HOH HOH . J 4 HOH B 58 380 122 HOH HOH . J 4 HOH B 59 381 124 HOH HOH . J 4 HOH B 60 382 129 HOH HOH . J 4 HOH B 61 383 131 HOH HOH . J 4 HOH B 62 384 134 HOH HOH . J 4 HOH B 63 385 135 HOH HOH . J 4 HOH B 64 386 136 HOH HOH . J 4 HOH B 65 387 137 HOH HOH . J 4 HOH B 66 388 138 HOH HOH . J 4 HOH B 67 389 140 HOH HOH . J 4 HOH B 68 390 143 HOH HOH . J 4 HOH B 69 391 144 HOH HOH . J 4 HOH B 70 392 145 HOH HOH . J 4 HOH B 71 393 147 HOH HOH . J 4 HOH B 72 394 148 HOH HOH . J 4 HOH B 73 395 151 HOH HOH . J 4 HOH B 74 396 153 HOH HOH . J 4 HOH B 75 397 154 HOH HOH . J 4 HOH B 76 398 157 HOH HOH . J 4 HOH B 77 399 160 HOH HOH . J 4 HOH B 78 402 162 HOH HOH . J 4 HOH B 79 403 163 HOH HOH . J 4 HOH B 80 404 167 HOH HOH . J 4 HOH B 81 405 170 HOH HOH . J 4 HOH B 82 406 179 HOH HOH . J 4 HOH B 83 407 194 HOH HOH . J 4 HOH B 84 408 197 HOH HOH . J 4 HOH B 85 409 198 HOH HOH . J 4 HOH B 86 410 199 HOH HOH . J 4 HOH B 87 411 200 HOH HOH . J 4 HOH B 88 412 201 HOH HOH . J 4 HOH B 89 413 202 HOH HOH . J 4 HOH B 90 414 203 HOH HOH . J 4 HOH B 91 415 204 HOH HOH . J 4 HOH B 92 416 205 HOH HOH . J 4 HOH B 93 417 206 HOH HOH . J 4 HOH B 94 418 207 HOH HOH . J 4 HOH B 95 419 208 HOH HOH . J 4 HOH B 96 420 209 HOH HOH . J 4 HOH B 97 421 210 HOH HOH . J 4 HOH B 98 422 213 HOH HOH . J 4 HOH B 99 423 214 HOH HOH . J 4 HOH B 100 424 215 HOH HOH . J 4 HOH B 101 425 216 HOH HOH . J 4 HOH B 102 426 217 HOH HOH . J 4 HOH B 103 427 218 HOH HOH . J 4 HOH B 104 428 219 HOH HOH . J 4 HOH B 105 429 220 HOH HOH . J 4 HOH B 106 430 221 HOH HOH . J 4 HOH B 107 431 222 HOH HOH . J 4 HOH B 108 432 223 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -26.551 _atom_site.Cartn_y 39.793 _atom_site.Cartn_z -37.535 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #