data_3THQ # _model_server_result.job_id nLXatEw8c2SDRZ9kiTxD9A _model_server_result.datetime_utc '2024-11-26 10:20:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3thq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3380}' # _entry.id 3THQ # _exptl.entry_id 3THQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.32 _cell.angle_gamma 90 _cell.entry_id 3THQ _cell.length_a 59.621 _cell.length_b 64.343 _cell.length_c 61.255 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3THQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 3THQ _atom_sites.fract_transf_matrix[1][1] 0.016773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007935 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NUP A 1 1000 1000 NUP NUP . D 2 NUP B 1 1000 1000 NUP NUP . E 3 EPE B 1 3380 3380 EPE EPE . F 4 HOH A 1 248 3 HOH HOH . F 4 HOH A 2 249 7 HOH HOH . F 4 HOH A 3 250 8 HOH HOH . F 4 HOH A 4 251 12 HOH HOH . F 4 HOH A 5 252 13 HOH HOH . F 4 HOH A 6 253 14 HOH HOH . F 4 HOH A 7 254 15 HOH HOH . F 4 HOH A 8 255 16 HOH HOH . F 4 HOH A 9 256 18 HOH HOH . F 4 HOH A 10 257 23 HOH HOH . F 4 HOH A 11 258 27 HOH HOH . F 4 HOH A 12 259 30 HOH HOH . F 4 HOH A 13 260 31 HOH HOH . F 4 HOH A 14 261 32 HOH HOH . F 4 HOH A 15 262 33 HOH HOH . F 4 HOH A 16 263 35 HOH HOH . F 4 HOH A 17 264 36 HOH HOH . F 4 HOH A 18 265 37 HOH HOH . F 4 HOH A 19 266 40 HOH HOH . F 4 HOH A 20 267 43 HOH HOH . F 4 HOH A 21 268 50 HOH HOH . F 4 HOH A 22 269 52 HOH HOH . F 4 HOH A 23 270 53 HOH HOH . F 4 HOH A 24 271 58 HOH HOH . F 4 HOH A 25 272 59 HOH HOH . F 4 HOH A 26 273 60 HOH HOH . F 4 HOH A 27 274 62 HOH HOH . F 4 HOH A 28 275 65 HOH HOH . F 4 HOH A 29 276 66 HOH HOH . F 4 HOH A 30 277 68 HOH HOH . F 4 HOH A 31 278 70 HOH HOH . F 4 HOH A 32 279 71 HOH HOH . F 4 HOH A 33 280 72 HOH HOH . F 4 HOH A 34 281 73 HOH HOH . F 4 HOH A 35 282 75 HOH HOH . F 4 HOH A 36 283 76 HOH HOH . F 4 HOH A 37 284 77 HOH HOH . F 4 HOH A 38 285 80 HOH HOH . F 4 HOH A 39 286 81 HOH HOH . F 4 HOH A 40 287 83 HOH HOH . F 4 HOH A 41 288 84 HOH HOH . F 4 HOH A 42 289 87 HOH HOH . F 4 HOH A 43 290 88 HOH HOH . F 4 HOH A 44 291 90 HOH HOH . F 4 HOH A 45 292 92 HOH HOH . F 4 HOH A 46 293 94 HOH HOH . F 4 HOH A 47 294 95 HOH HOH . F 4 HOH A 48 295 96 HOH HOH . F 4 HOH A 49 296 97 HOH HOH . F 4 HOH A 50 297 99 HOH HOH . F 4 HOH A 51 298 100 HOH HOH . F 4 HOH A 52 299 101 HOH HOH . F 4 HOH A 53 300 102 HOH HOH . F 4 HOH A 54 301 104 HOH HOH . F 4 HOH A 55 302 105 HOH HOH . F 4 HOH A 56 303 106 HOH HOH . F 4 HOH A 57 304 109 HOH HOH . F 4 HOH A 58 305 111 HOH HOH . F 4 HOH A 59 306 113 HOH HOH . F 4 HOH A 60 307 115 HOH HOH . F 4 HOH A 61 308 122 HOH HOH . F 4 HOH A 62 309 124 HOH HOH . F 4 HOH A 63 310 128 HOH HOH . F 4 HOH A 64 311 129 HOH HOH . F 4 HOH A 65 312 130 HOH HOH . F 4 HOH A 66 313 132 HOH HOH . F 4 HOH A 67 314 133 HOH HOH . F 4 HOH A 68 315 134 HOH HOH . F 4 HOH A 69 316 138 HOH HOH . F 4 HOH A 70 317 139 HOH HOH . F 4 HOH A 71 318 141 HOH HOH . F 4 HOH A 72 319 146 HOH HOH . F 4 HOH A 73 320 147 HOH HOH . F 4 HOH A 74 321 149 HOH HOH . F 4 HOH A 75 322 152 HOH HOH . F 4 HOH A 76 323 153 HOH HOH . F 4 HOH A 77 324 155 HOH HOH . F 4 HOH A 78 325 156 HOH HOH . F 4 HOH A 79 326 161 HOH HOH . F 4 HOH A 80 327 162 HOH HOH . F 4 HOH A 81 328 163 HOH HOH . F 4 HOH A 82 329 166 HOH HOH . F 4 HOH A 83 330 167 HOH HOH . F 4 HOH A 84 331 169 HOH HOH . F 4 HOH A 85 332 170 HOH HOH . F 4 HOH A 86 333 172 HOH HOH . F 4 HOH A 87 334 174 HOH HOH . F 4 HOH A 88 335 175 HOH HOH . F 4 HOH A 89 336 176 HOH HOH . F 4 HOH A 90 337 178 HOH HOH . F 4 HOH A 91 338 179 HOH HOH . F 4 HOH A 92 339 180 HOH HOH . F 4 HOH A 93 340 181 HOH HOH . F 4 HOH A 94 341 185 HOH HOH . F 4 HOH A 95 342 186 HOH HOH . F 4 HOH A 96 343 187 HOH HOH . F 4 HOH A 97 344 188 HOH HOH . F 4 HOH A 98 345 189 HOH HOH . F 4 HOH A 99 346 190 HOH HOH . F 4 HOH A 100 347 191 HOH HOH . F 4 HOH A 101 348 195 HOH HOH . F 4 HOH A 102 349 196 HOH HOH . F 4 HOH A 103 350 197 HOH HOH . F 4 HOH A 104 351 198 HOH HOH . F 4 HOH A 105 352 199 HOH HOH . F 4 HOH A 106 353 202 HOH HOH . F 4 HOH A 107 354 203 HOH HOH . F 4 HOH A 108 355 207 HOH HOH . F 4 HOH A 109 356 211 HOH HOH . F 4 HOH A 110 357 212 HOH HOH . G 4 HOH B 1 248 1 HOH HOH . G 4 HOH B 2 249 2 HOH HOH . G 4 HOH B 3 250 4 HOH HOH . G 4 HOH B 4 251 5 HOH HOH . G 4 HOH B 5 252 6 HOH HOH . G 4 HOH B 6 253 9 HOH HOH . G 4 HOH B 7 254 10 HOH HOH . G 4 HOH B 8 255 11 HOH HOH . G 4 HOH B 9 256 17 HOH HOH . G 4 HOH B 10 257 19 HOH HOH . G 4 HOH B 11 258 20 HOH HOH . G 4 HOH B 12 259 21 HOH HOH . G 4 HOH B 13 260 22 HOH HOH . G 4 HOH B 14 261 24 HOH HOH . G 4 HOH B 15 262 25 HOH HOH . G 4 HOH B 16 263 26 HOH HOH . G 4 HOH B 17 264 28 HOH HOH . G 4 HOH B 18 265 29 HOH HOH . G 4 HOH B 19 266 34 HOH HOH . G 4 HOH B 20 267 38 HOH HOH . G 4 HOH B 21 268 39 HOH HOH . G 4 HOH B 22 269 41 HOH HOH . G 4 HOH B 23 270 42 HOH HOH . G 4 HOH B 24 271 44 HOH HOH . G 4 HOH B 25 272 45 HOH HOH . G 4 HOH B 26 273 46 HOH HOH . G 4 HOH B 27 274 47 HOH HOH . G 4 HOH B 28 275 48 HOH HOH . G 4 HOH B 29 276 49 HOH HOH . G 4 HOH B 30 277 51 HOH HOH . G 4 HOH B 31 278 54 HOH HOH . G 4 HOH B 32 279 55 HOH HOH . G 4 HOH B 33 280 56 HOH HOH . G 4 HOH B 34 281 57 HOH HOH . G 4 HOH B 35 282 61 HOH HOH . G 4 HOH B 36 283 63 HOH HOH . G 4 HOH B 37 284 64 HOH HOH . G 4 HOH B 38 285 67 HOH HOH . G 4 HOH B 39 286 69 HOH HOH . G 4 HOH B 40 287 74 HOH HOH . G 4 HOH B 41 288 78 HOH HOH . G 4 HOH B 42 289 79 HOH HOH . G 4 HOH B 43 290 82 HOH HOH . G 4 HOH B 44 291 85 HOH HOH . G 4 HOH B 45 292 86 HOH HOH . G 4 HOH B 46 293 89 HOH HOH . G 4 HOH B 47 294 91 HOH HOH . G 4 HOH B 48 295 93 HOH HOH . G 4 HOH B 49 296 98 HOH HOH . G 4 HOH B 50 297 103 HOH HOH . G 4 HOH B 51 298 107 HOH HOH . G 4 HOH B 52 299 108 HOH HOH . G 4 HOH B 53 300 110 HOH HOH . G 4 HOH B 54 301 112 HOH HOH . G 4 HOH B 55 302 114 HOH HOH . G 4 HOH B 56 303 116 HOH HOH . G 4 HOH B 57 304 117 HOH HOH . G 4 HOH B 58 305 118 HOH HOH . G 4 HOH B 59 306 119 HOH HOH . G 4 HOH B 60 307 120 HOH HOH . G 4 HOH B 61 308 121 HOH HOH . G 4 HOH B 62 309 123 HOH HOH . G 4 HOH B 63 310 125 HOH HOH . G 4 HOH B 64 311 126 HOH HOH . G 4 HOH B 65 312 127 HOH HOH . G 4 HOH B 66 313 131 HOH HOH . G 4 HOH B 67 314 135 HOH HOH . G 4 HOH B 68 315 136 HOH HOH . G 4 HOH B 69 316 137 HOH HOH . G 4 HOH B 70 317 140 HOH HOH . G 4 HOH B 71 318 142 HOH HOH . G 4 HOH B 72 319 143 HOH HOH . G 4 HOH B 73 320 144 HOH HOH . G 4 HOH B 74 321 145 HOH HOH . G 4 HOH B 75 322 148 HOH HOH . G 4 HOH B 76 323 150 HOH HOH . G 4 HOH B 77 324 151 HOH HOH . G 4 HOH B 78 325 154 HOH HOH . G 4 HOH B 79 326 157 HOH HOH . G 4 HOH B 80 327 158 HOH HOH . G 4 HOH B 81 328 159 HOH HOH . G 4 HOH B 82 329 160 HOH HOH . G 4 HOH B 83 330 164 HOH HOH . G 4 HOH B 84 331 165 HOH HOH . G 4 HOH B 85 332 168 HOH HOH . G 4 HOH B 86 333 171 HOH HOH . G 4 HOH B 87 334 173 HOH HOH . G 4 HOH B 88 335 177 HOH HOH . G 4 HOH B 89 336 182 HOH HOH . G 4 HOH B 90 337 183 HOH HOH . G 4 HOH B 91 338 184 HOH HOH . G 4 HOH B 92 339 192 HOH HOH . G 4 HOH B 93 340 193 HOH HOH . G 4 HOH B 94 341 194 HOH HOH . G 4 HOH B 95 342 200 HOH HOH . G 4 HOH B 96 343 201 HOH HOH . G 4 HOH B 97 344 204 HOH HOH . G 4 HOH B 98 345 205 HOH HOH . G 4 HOH B 99 346 206 HOH HOH . G 4 HOH B 100 347 208 HOH HOH . G 4 HOH B 101 348 209 HOH HOH . G 4 HOH B 102 349 210 HOH HOH . G 4 HOH B 103 350 213 HOH HOH . G 4 HOH B 104 351 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 3 -13.473 -3.47 15.737 0.6 14.88 ? N1 EPE 3380 B 1 HETATM 2 C C2 EPE . . . E 3 -13.698 -4.306 14.546 0.6 11.65 ? C2 EPE 3380 B 1 HETATM 3 C C3 EPE . . . E 3 -14.929 -5.178 14.757 0.6 13.02 ? C3 EPE 3380 B 1 HETATM 4 N N4 EPE . . . E 3 -14.851 -5.942 15.994 0.6 11.12 ? N4 EPE 3380 B 1 HETATM 5 C C5 EPE . . . E 3 -14.439 -5.21 17.184 0.6 12.55 ? C5 EPE 3380 B 1 HETATM 6 C C6 EPE . . . E 3 -13.242 -4.29 16.94 0.6 13.35 ? C6 EPE 3380 B 1 HETATM 7 C C7 EPE . . . E 3 -15.973 -6.86 16.095 0.6 11.11 ? C7 EPE 3380 B 1 HETATM 8 C C8 EPE . . . E 3 -16.001 -7.728 17.341 0.6 10.8 ? C8 EPE 3380 B 1 HETATM 9 O O8 EPE . . . E 3 -14.748 -8.352 17.492 0.6 10.94 ? O8 EPE 3380 B 1 HETATM 10 C C9 EPE . . . E 3 -12.315 -2.601 15.465 0.6 20.23 ? C9 EPE 3380 B 1 HETATM 11 C C10 EPE . . . E 3 -12.313 -1.393 16.395 0.6 27.16 ? C10 EPE 3380 B 1 HETATM 12 S S EPE . . . E 3 -12.121 0.147 15.469 0.6 31.68 ? S EPE 3380 B 1 HETATM 13 O O1S EPE . . . E 3 -12.865 0.036 14.217 0.6 32.67 ? O1S EPE 3380 B 1 HETATM 14 O O2S EPE . . . E 3 -12.655 1.252 16.261 0.6 32.69 ? O2S EPE 3380 B 1 HETATM 15 O O3S EPE . . . E 3 -10.715 0.371 15.135 0.6 30.36 ? O3S EPE 3380 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #