data_3THS # _model_server_result.job_id 1lZVDkixWtv9OjvwQ1Uwpw _model_server_result.datetime_utc '2025-03-04 23:26:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ths # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":400}' # _entry.id 3THS # _exptl.entry_id 3THS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 128.92 _cell.angle_gamma 90 _cell.entry_id 3THS _cell.length_a 193.036 _cell.length_b 61.047 _cell.length_c 146.352 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3THS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,G,H,I,J,K,L 1 1 E 2 1 F 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N VAL 2 A VAL 1 1_555 A C ACE 1 A ACE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? covale ? covale2 B N VAL 2 B VAL 1 1_555 B C ACE 1 B ACE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 B SG CYS 186 B CYS 185 1_555 G S2 BME . B BME 400 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.081 ? covale ? covale4 B SG CYS 186 B CYS 185 1_555 G S2 BME . B BME 400 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.046 ? covale ? covale5 C N VAL 2 C VAL 1 1_555 C C ACE 1 C ACE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale6 D N VAL 2 D VAL 1 1_555 D C ACE 1 D ACE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale7 E C 03O 1 E 03O 1 1_555 E N GGL 2 E GGL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 E CD GGL 2 E GGL 2 1_555 E N GGL 3 E GGL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale9 F C 03O 1 F 03O 1 1_555 F N GGL 2 F GGL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale10 F CD GGL 2 F GGL 2 1_555 F N GGL 3 F GGL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 120 n n C1 O1 BME sing 121 n n C1 H11 BME sing 122 n n C1 H12 BME sing 123 n n C2 S2 BME sing 124 n n C2 H21 BME sing 125 n n C2 H22 BME sing 126 n n O1 HO1 BME sing 127 n n S2 HS2 BME sing 128 n n # _atom_sites.entry_id 3THS _atom_sites.fract_transf_matrix[1][1] 0.00518 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004183 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016381 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 BME B 1 400 400 BME BME . H 4 TAM B 1 293 293 TAM TAM . I 5 HOH A 1 293 293 HOH HOH . I 5 HOH A 2 294 294 HOH HOH . I 5 HOH A 3 295 295 HOH HOH . I 5 HOH A 4 296 296 HOH HOH . I 5 HOH A 5 297 297 HOH HOH . I 5 HOH A 6 298 298 HOH HOH . I 5 HOH A 7 299 299 HOH HOH . I 5 HOH A 8 301 301 HOH HOH . I 5 HOH A 9 302 302 HOH HOH . I 5 HOH A 10 303 303 HOH HOH . I 5 HOH A 11 304 304 HOH HOH . I 5 HOH A 12 305 305 HOH HOH . I 5 HOH A 13 306 306 HOH HOH . I 5 HOH A 14 307 307 HOH HOH . I 5 HOH A 15 308 308 HOH HOH . I 5 HOH A 16 309 309 HOH HOH . I 5 HOH A 17 310 310 HOH HOH . I 5 HOH A 18 311 311 HOH HOH . I 5 HOH A 19 312 312 HOH HOH . I 5 HOH A 20 313 313 HOH HOH . I 5 HOH A 21 314 314 HOH HOH . I 5 HOH A 22 315 315 HOH HOH . I 5 HOH A 23 316 316 HOH HOH . I 5 HOH A 24 317 317 HOH HOH . I 5 HOH A 25 318 318 HOH HOH . I 5 HOH A 26 319 319 HOH HOH . I 5 HOH A 27 320 320 HOH HOH . I 5 HOH A 28 321 321 HOH HOH . I 5 HOH A 29 322 322 HOH HOH . I 5 HOH A 30 323 323 HOH HOH . I 5 HOH A 31 324 324 HOH HOH . J 5 HOH B 1 294 294 HOH HOH . J 5 HOH B 2 295 295 HOH HOH . J 5 HOH B 3 296 296 HOH HOH . J 5 HOH B 4 297 297 HOH HOH . J 5 HOH B 5 298 298 HOH HOH . J 5 HOH B 6 299 299 HOH HOH . J 5 HOH B 7 301 301 HOH HOH . J 5 HOH B 8 302 302 HOH HOH . J 5 HOH B 9 303 303 HOH HOH . J 5 HOH B 10 304 304 HOH HOH . J 5 HOH B 11 305 305 HOH HOH . J 5 HOH B 12 306 306 HOH HOH . J 5 HOH B 13 307 307 HOH HOH . J 5 HOH B 14 308 308 HOH HOH . J 5 HOH B 15 309 309 HOH HOH . J 5 HOH B 16 310 310 HOH HOH . J 5 HOH B 17 311 311 HOH HOH . J 5 HOH B 18 312 312 HOH HOH . J 5 HOH B 19 313 313 HOH HOH . J 5 HOH B 20 314 314 HOH HOH . J 5 HOH B 21 315 315 HOH HOH . J 5 HOH B 22 316 316 HOH HOH . J 5 HOH B 23 317 317 HOH HOH . J 5 HOH B 24 318 318 HOH HOH . J 5 HOH B 25 319 319 HOH HOH . J 5 HOH B 26 320 320 HOH HOH . J 5 HOH B 27 321 321 HOH HOH . J 5 HOH B 28 322 322 HOH HOH . J 5 HOH B 29 323 323 HOH HOH . J 5 HOH B 30 324 324 HOH HOH . K 5 HOH C 1 293 293 HOH HOH . K 5 HOH C 2 294 294 HOH HOH . K 5 HOH C 3 295 295 HOH HOH . K 5 HOH C 4 296 296 HOH HOH . K 5 HOH C 5 297 297 HOH HOH . K 5 HOH C 6 298 298 HOH HOH . K 5 HOH C 7 299 299 HOH HOH . K 5 HOH C 8 301 301 HOH HOH . K 5 HOH C 9 302 302 HOH HOH . K 5 HOH C 10 303 303 HOH HOH . K 5 HOH C 11 304 304 HOH HOH . K 5 HOH C 12 305 305 HOH HOH . K 5 HOH C 13 306 306 HOH HOH . L 5 HOH D 1 293 293 HOH HOH . L 5 HOH D 2 294 294 HOH HOH . L 5 HOH D 3 295 295 HOH HOH . L 5 HOH D 4 296 296 HOH HOH . L 5 HOH D 5 297 297 HOH HOH . L 5 HOH D 6 298 298 HOH HOH . L 5 HOH D 7 299 299 HOH HOH . L 5 HOH D 8 301 301 HOH HOH . L 5 HOH D 9 302 302 HOH HOH . L 5 HOH D 10 303 303 HOH HOH . L 5 HOH D 11 304 304 HOH HOH . L 5 HOH D 12 305 305 HOH HOH . L 5 HOH D 13 306 306 HOH HOH . L 5 HOH D 14 307 307 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . A . G 3 -18.317 34.779 -0.227 0.5 45.51 ? C1 BME 400 B 1 HETATM 2 C C1 BME . B . G 3 -19.2 33.278 0.223 0.5 40.33 ? C1 BME 400 B 1 HETATM 3 C C2 BME . A . G 3 -16.844 34.988 -0.64 0.5 45.18 ? C2 BME 400 B 1 HETATM 4 C C2 BME . B . G 3 -17.865 32.553 0.088 0.5 45.3 ? C2 BME 400 B 1 HETATM 5 O O1 BME . A . G 3 -18.972 35.863 0.486 0.5 43.51 ? O1 BME 400 B 1 HETATM 6 O O1 BME . B . G 3 -19.818 32.776 1.393 0.5 33.41 ? O1 BME 400 B 1 HETATM 7 S S2 BME . A . G 3 -15.818 33.491 -0.281 0.5 50.42 ? S2 BME 400 B 1 HETATM 8 S S2 BME . B . G 3 -16.9 33.232 -1.288 0.5 52.63 ? S2 BME 400 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #