data_3TJ9 # _model_server_result.job_id 0RFe0ces2JtDv22i16yCJg _model_server_result.datetime_utc '2024-11-09 23:17:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tj9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":172}' # _entry.id 3TJ9 # _exptl.entry_id 3TJ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TJ9 _cell.length_a 109.343 _cell.length_b 109.343 _cell.length_c 280.343 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TJ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,H,I 1 1 C,D,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 102 A HIS 102 1_555 E ZN ZN . A ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc2 A NE2 HIS 152 A HIS 152 1_555 G ZN ZN . C ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc3 A OE2 GLU 154 A GLU 154 1_555 E ZN ZN . A ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc4 A OE1 GLU 154 A GLU 154 1_555 E ZN ZN . A ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc5 E ZN ZN . A ZN 171 1_555 B NE2 HIS 102 B HIS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc6 E ZN ZN . A ZN 171 1_555 B NE2 HIS 152 B HIS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? metalc ? metalc7 E ZN ZN . A ZN 171 1_555 D NE2 HIS 152 D HIS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc8 C NE2 HIS 102 C HIS 102 1_555 G ZN ZN . C ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc9 C ND1 HIS 152 C HIS 152 1_555 G ZN ZN . C ZN 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc10 G ZN ZN . C ZN 171 1_555 D NE2 HIS 102 D HIS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc11 G ZN ZN . C ZN 171 1_555 D OE1 GLU 154 D GLU 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 3TJ9 _atom_sites.fract_transf_matrix[1][1] 0.009146 _atom_sites.fract_transf_matrix[1][2] 0.00528 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 171 2 ZN ZN . F 3 FMT A 1 172 1 FMT FMT . G 2 ZN C 1 171 1 ZN ZN . H 4 HOH A 1 173 5 HOH HOH . H 4 HOH A 2 174 6 HOH HOH . H 4 HOH A 3 175 7 HOH HOH . H 4 HOH A 4 176 176 HOH HOH . H 4 HOH A 5 177 8 HOH HOH . H 4 HOH A 6 178 9 HOH HOH . H 4 HOH A 7 179 10 HOH HOH . H 4 HOH A 8 180 11 HOH HOH . H 4 HOH A 9 181 181 HOH HOH . H 4 HOH A 10 182 182 HOH HOH . H 4 HOH A 11 183 12 HOH HOH . H 4 HOH A 12 184 13 HOH HOH . H 4 HOH A 13 185 185 HOH HOH . H 4 HOH A 14 186 186 HOH HOH . H 4 HOH A 15 187 15 HOH HOH . H 4 HOH A 16 188 17 HOH HOH . H 4 HOH A 17 189 18 HOH HOH . H 4 HOH A 18 190 19 HOH HOH . H 4 HOH A 19 191 20 HOH HOH . H 4 HOH A 20 192 34 HOH HOH . H 4 HOH A 21 193 35 HOH HOH . H 4 HOH A 22 194 36 HOH HOH . H 4 HOH A 23 195 37 HOH HOH . H 4 HOH A 24 196 38 HOH HOH . H 4 HOH A 25 197 40 HOH HOH . H 4 HOH A 26 198 41 HOH HOH . H 4 HOH A 27 199 42 HOH HOH . H 4 HOH A 28 200 43 HOH HOH . H 4 HOH A 29 201 44 HOH HOH . H 4 HOH A 30 202 76 HOH HOH . H 4 HOH A 31 203 77 HOH HOH . H 4 HOH A 32 204 78 HOH HOH . H 4 HOH A 33 205 80 HOH HOH . H 4 HOH A 34 206 93 HOH HOH . H 4 HOH A 35 207 94 HOH HOH . H 4 HOH A 36 208 95 HOH HOH . H 4 HOH A 37 209 97 HOH HOH . H 4 HOH A 38 210 98 HOH HOH . H 4 HOH A 39 211 99 HOH HOH . H 4 HOH A 40 212 212 HOH HOH . H 4 HOH A 41 213 100 HOH HOH . H 4 HOH A 42 214 214 HOH HOH . H 4 HOH A 43 215 215 HOH HOH . H 4 HOH A 44 216 101 HOH HOH . H 4 HOH A 45 217 111 HOH HOH . H 4 HOH A 46 218 112 HOH HOH . H 4 HOH A 47 219 219 HOH HOH . H 4 HOH A 48 220 113 HOH HOH . H 4 HOH A 49 221 114 HOH HOH . H 4 HOH A 50 222 115 HOH HOH . H 4 HOH A 51 223 117 HOH HOH . H 4 HOH A 52 224 135 HOH HOH . H 4 HOH A 53 225 137 HOH HOH . H 4 HOH A 54 226 138 HOH HOH . H 4 HOH A 55 227 139 HOH HOH . H 4 HOH A 56 228 140 HOH HOH . H 4 HOH A 57 229 141 HOH HOH . H 4 HOH A 58 230 142 HOH HOH . H 4 HOH A 59 231 143 HOH HOH . H 4 HOH A 60 232 144 HOH HOH . H 4 HOH A 61 233 145 HOH HOH . H 4 HOH A 62 234 146 HOH HOH . H 4 HOH A 63 235 147 HOH HOH . I 4 HOH B 1 171 65 HOH HOH . I 4 HOH B 2 172 172 HOH HOH . I 4 HOH B 3 173 66 HOH HOH . I 4 HOH B 4 174 67 HOH HOH . I 4 HOH B 5 175 68 HOH HOH . I 4 HOH B 6 176 69 HOH HOH . I 4 HOH B 7 177 70 HOH HOH . I 4 HOH B 8 178 71 HOH HOH . I 4 HOH B 9 179 72 HOH HOH . I 4 HOH B 10 180 180 HOH HOH . I 4 HOH B 11 181 73 HOH HOH . I 4 HOH B 12 182 74 HOH HOH . I 4 HOH B 13 183 75 HOH HOH . I 4 HOH B 14 184 91 HOH HOH . I 4 HOH B 15 185 92 HOH HOH . I 4 HOH B 16 186 123 HOH HOH . I 4 HOH B 17 187 124 HOH HOH . I 4 HOH B 18 188 125 HOH HOH . I 4 HOH B 19 189 126 HOH HOH . I 4 HOH B 20 190 127 HOH HOH . I 4 HOH B 21 191 128 HOH HOH . I 4 HOH B 22 192 129 HOH HOH . I 4 HOH B 23 193 169 HOH HOH . I 4 HOH B 24 198 198 HOH HOH . I 4 HOH B 25 199 199 HOH HOH . I 4 HOH B 26 200 200 HOH HOH . I 4 HOH B 27 201 201 HOH HOH . I 4 HOH B 28 202 202 HOH HOH . I 4 HOH B 29 203 203 HOH HOH . I 4 HOH B 30 205 205 HOH HOH . I 4 HOH B 31 206 206 HOH HOH . I 4 HOH B 32 207 207 HOH HOH . I 4 HOH B 33 208 208 HOH HOH . I 4 HOH B 34 209 209 HOH HOH . I 4 HOH B 35 210 210 HOH HOH . I 4 HOH B 36 221 221 HOH HOH . I 4 HOH B 37 226 226 HOH HOH . J 4 HOH C 1 172 21 HOH HOH . J 4 HOH C 2 173 22 HOH HOH . J 4 HOH C 3 174 23 HOH HOH . J 4 HOH C 4 175 24 HOH HOH . J 4 HOH C 5 176 25 HOH HOH . J 4 HOH C 6 177 177 HOH HOH . J 4 HOH C 7 178 26 HOH HOH . J 4 HOH C 8 179 27 HOH HOH . J 4 HOH C 9 180 29 HOH HOH . J 4 HOH C 10 181 30 HOH HOH . J 4 HOH C 11 182 31 HOH HOH . J 4 HOH C 12 183 32 HOH HOH . J 4 HOH C 13 184 33 HOH HOH . J 4 HOH C 14 185 45 HOH HOH . J 4 HOH C 15 186 46 HOH HOH . J 4 HOH C 16 187 47 HOH HOH . J 4 HOH C 17 188 50 HOH HOH . J 4 HOH C 18 189 189 HOH HOH . J 4 HOH C 19 190 190 HOH HOH . J 4 HOH C 20 191 191 HOH HOH . J 4 HOH C 21 192 192 HOH HOH . J 4 HOH C 22 193 193 HOH HOH . J 4 HOH C 23 194 51 HOH HOH . J 4 HOH C 24 195 52 HOH HOH . J 4 HOH C 25 196 53 HOH HOH . J 4 HOH C 26 197 81 HOH HOH . J 4 HOH C 27 198 102 HOH HOH . J 4 HOH C 28 199 120 HOH HOH . J 4 HOH C 29 200 130 HOH HOH . J 4 HOH C 30 201 131 HOH HOH . J 4 HOH C 31 202 134 HOH HOH . J 4 HOH C 32 203 149 HOH HOH . J 4 HOH C 33 204 150 HOH HOH . J 4 HOH C 34 205 151 HOH HOH . J 4 HOH C 35 206 152 HOH HOH . J 4 HOH C 36 207 153 HOH HOH . J 4 HOH C 37 208 154 HOH HOH . J 4 HOH C 38 209 156 HOH HOH . J 4 HOH C 39 210 157 HOH HOH . J 4 HOH C 40 211 158 HOH HOH . J 4 HOH C 41 212 160 HOH HOH . J 4 HOH C 42 213 213 HOH HOH . J 4 HOH C 43 214 161 HOH HOH . J 4 HOH C 44 217 217 HOH HOH . J 4 HOH C 45 224 224 HOH HOH . J 4 HOH C 46 225 225 HOH HOH . J 4 HOH C 47 227 227 HOH HOH . J 4 HOH C 48 228 228 HOH HOH . K 4 HOH D 1 171 28 HOH HOH . K 4 HOH D 2 172 54 HOH HOH . K 4 HOH D 3 173 55 HOH HOH . K 4 HOH D 4 174 174 HOH HOH . K 4 HOH D 5 175 175 HOH HOH . K 4 HOH D 6 176 56 HOH HOH . K 4 HOH D 7 177 57 HOH HOH . K 4 HOH D 8 178 58 HOH HOH . K 4 HOH D 9 179 179 HOH HOH . K 4 HOH D 10 180 59 HOH HOH . K 4 HOH D 11 181 61 HOH HOH . K 4 HOH D 12 182 62 HOH HOH . K 4 HOH D 13 183 63 HOH HOH . K 4 HOH D 14 184 64 HOH HOH . K 4 HOH D 15 185 79 HOH HOH . K 4 HOH D 16 186 84 HOH HOH . K 4 HOH D 17 187 187 HOH HOH . K 4 HOH D 18 188 85 HOH HOH . K 4 HOH D 19 189 86 HOH HOH . K 4 HOH D 20 190 87 HOH HOH . K 4 HOH D 21 191 88 HOH HOH . K 4 HOH D 22 192 89 HOH HOH . K 4 HOH D 23 193 90 HOH HOH . K 4 HOH D 24 194 194 HOH HOH . K 4 HOH D 25 195 195 HOH HOH . K 4 HOH D 26 196 196 HOH HOH . K 4 HOH D 27 197 103 HOH HOH . K 4 HOH D 28 198 104 HOH HOH . K 4 HOH D 29 199 106 HOH HOH . K 4 HOH D 30 200 107 HOH HOH . K 4 HOH D 31 201 108 HOH HOH . K 4 HOH D 32 202 110 HOH HOH . K 4 HOH D 33 203 119 HOH HOH . K 4 HOH D 34 204 132 HOH HOH . K 4 HOH D 35 205 133 HOH HOH . K 4 HOH D 36 206 163 HOH HOH . K 4 HOH D 37 207 165 HOH HOH . K 4 HOH D 38 208 167 HOH HOH . K 4 HOH D 39 218 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 3 36.735 -60.487 -13.962 1 72.27 ? C FMT 172 A 1 HETATM 2 O O1 FMT . . . F 3 36.729 -61.24 -12.982 1 72.45 ? O1 FMT 172 A 1 HETATM 3 O O2 FMT . . . F 3 35.736 -59.933 -14.438 1 71.39 ? O2 FMT 172 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #