data_3TJS
#
_model_server_result.job_id            P5DtDfMqVq-dwsbTJkNzow 
_model_server_result.datetime_utc      '2024-11-24 03:21:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tjs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":508}' 
#
_entry.id    3TJS 
#
_exptl.entry_id    3TJS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TJS 
_cell.length_a            78.79 
_cell.length_b            98.6 
_cell.length_c            125.07 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TJS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc2 B FE HEM . A HEM 508 1_555 C N11 D0R . A D0R 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 217 n n 
CHA C4D HEM doub 218 n n 
CHA HHA HEM sing 219 n n 
CHB C4A HEM sing 220 n n 
CHB C1B HEM doub 221 n n 
CHB HHB HEM sing 222 n n 
CHC C4B HEM sing 223 n n 
CHC C1C HEM doub 224 n n 
CHC HHC HEM sing 225 n n 
CHD C4C HEM doub 226 n n 
CHD C1D HEM sing 227 n n 
CHD HHD HEM sing 228 n n 
C1A C2A HEM doub 229 n y 
C1A NA HEM sing 230 n y 
C2A C3A HEM sing 231 n y 
C2A CAA HEM sing 232 n n 
C3A C4A HEM doub 233 n y 
C3A CMA HEM sing 234 n n 
C4A NA HEM sing 235 n y 
CMA HMA HEM sing 236 n n 
CMA HMAA HEM sing 237 n n 
CMA HMAB HEM sing 238 n n 
CAA CBA HEM sing 239 n n 
CAA HAA HEM sing 240 n n 
CAA HAAA HEM sing 241 n n 
CBA CGA HEM sing 242 n n 
CBA HBA HEM sing 243 n n 
CBA HBAA HEM sing 244 n n 
CGA O1A HEM doub 245 n n 
CGA O2A HEM sing 246 n n 
C1B C2B HEM sing 247 n n 
C1B NB HEM sing 248 n n 
C2B C3B HEM doub 249 n n 
C2B CMB HEM sing 250 n n 
C3B C4B HEM sing 251 n n 
C3B CAB HEM sing 252 n n 
C4B NB HEM doub 253 n n 
CMB HMB HEM sing 254 n n 
CMB HMBA HEM sing 255 n n 
CMB HMBB HEM sing 256 n n 
CAB CBB HEM doub 257 n n 
CAB HAB HEM sing 258 n n 
CBB HBB HEM sing 259 n n 
CBB HBBA HEM sing 260 n n 
C1C C2C HEM sing 261 n y 
C1C NC HEM sing 262 n y 
C2C C3C HEM doub 263 n y 
C2C CMC HEM sing 264 n n 
C3C C4C HEM sing 265 n y 
C3C CAC HEM sing 266 n n 
C4C NC HEM sing 267 n y 
CMC HMC HEM sing 268 n n 
CMC HMCA HEM sing 269 n n 
CMC HMCB HEM sing 270 n n 
CAC CBC HEM doub 271 n n 
CAC HAC HEM sing 272 n n 
CBC HBC HEM sing 273 n n 
CBC HBCA HEM sing 274 n n 
C1D C2D HEM sing 275 n n 
C1D ND HEM doub 276 n n 
C2D C3D HEM doub 277 n n 
C2D CMD HEM sing 278 n n 
C3D C4D HEM sing 279 n n 
C3D CAD HEM sing 280 n n 
C4D ND HEM sing 281 n n 
CMD HMD HEM sing 282 n n 
CMD HMDA HEM sing 283 n n 
CMD HMDB HEM sing 284 n n 
CAD CBD HEM sing 285 n n 
CAD HAD HEM sing 286 n n 
CAD HADA HEM sing 287 n n 
CBD CGD HEM sing 288 n n 
CBD HBD HEM sing 289 n n 
CBD HBDA HEM sing 290 n n 
CGD O1D HEM doub 291 n n 
CGD O2D HEM sing 292 n n 
O2A H2A HEM sing 293 n n 
O2D H2D HEM sing 294 n n 
FE NA HEM sing 295 n n 
FE NB HEM sing 296 n n 
FE NC HEM sing 297 n n 
FE ND HEM sing 298 n n 
#
_atom_sites.entry_id                     3TJS 
_atom_sites.fract_transf_matrix[1][1]    0.012692 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010142 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007996 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 508 500 HEM HEM . 
C 3 D0R A 1 600 600 D0R D0R . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 23.379 -19.695 -8.755 1 32.42 ? CHA HEM 508 A 1 
HETATM 2 C CHB HEM . . . B 2 22.701 -22.467 -12.674 1 28.09 ? CHB HEM 508 A 1 
HETATM 3 C CHC HEM . . . B 2 22.548 -26.284 -9.728 1 35.91 ? CHC HEM 508 A 1 
HETATM 4 C CHD HEM . . . B 2 23.131 -23.574 -5.857 1 38.71 ? CHD HEM 508 A 1 
HETATM 5 C C1A HEM . . . B 2 23.221 -20.132 -10.074 1 33.45 ? C1A HEM 508 A 1 
HETATM 6 C C2A HEM . . . B 2 23.163 -19.259 -11.248 1 32.19 ? C2A HEM 508 A 1 
HETATM 7 C C3A HEM . . . B 2 23.005 -20.051 -12.282 1 27.39 ? C3A HEM 508 A 1 
HETATM 8 C C4A HEM . . . B 2 22.855 -21.386 -11.833 1 28.44 ? C4A HEM 508 A 1 
HETATM 9 C CMA HEM . . . B 2 22.906 -19.638 -13.768 1 29.46 ? CMA HEM 508 A 1 
HETATM 10 C CAA HEM . . . B 2 23.393 -17.691 -11.273 1 29.57 ? CAA HEM 508 A 1 
HETATM 11 C CBA HEM . . . B 2 24.967 -17.532 -11.294 1 28.5 ? CBA HEM 508 A 1 
HETATM 12 C CGA HEM . . . B 2 25.34 -16.115 -11.69 1 35.15 ? CGA HEM 508 A 1 
HETATM 13 O O1A HEM . . . B 2 24.477 -15.24 -11.44 1 30.99 ? O1A HEM 508 A 1 
HETATM 14 O O2A HEM . . . B 2 26.439 -15.831 -12.276 1 36.64 ? O2A HEM 508 A 1 
HETATM 15 C C1B HEM . . . B 2 22.604 -23.747 -12.218 1 31.82 ? C1B HEM 508 A 1 
HETATM 16 C C2B HEM . . . B 2 22.433 -24.912 -13.053 1 30.92 ? C2B HEM 508 A 1 
HETATM 17 C C3B HEM . . . B 2 22.364 -25.981 -12.216 1 34.34 ? C3B HEM 508 A 1 
HETATM 18 C C4B HEM . . . B 2 22.508 -25.501 -10.849 1 34.66 ? C4B HEM 508 A 1 
HETATM 19 C CMB HEM . . . B 2 22.332 -24.859 -14.622 1 26.85 ? CMB HEM 508 A 1 
HETATM 20 C CAB HEM . . . B 2 22.134 -27.487 -12.571 1 37.77 ? CAB HEM 508 A 1 
HETATM 21 C CBB HEM . . . B 2 22.417 -27.959 -13.801 1 38.5 ? CBB HEM 508 A 1 
HETATM 22 C C1C HEM . . . B 2 22.731 -25.906 -8.428 1 36.39 ? C1C HEM 508 A 1 
HETATM 23 C C2C HEM . . . B 2 22.775 -26.805 -7.256 1 36.61 ? C2C HEM 508 A 1 
HETATM 24 C C3C HEM . . . B 2 22.907 -26.01 -6.207 1 37.67 ? C3C HEM 508 A 1 
HETATM 25 C C4C HEM . . . B 2 22.98 -24.65 -6.689 1 37.59 ? C4C HEM 508 A 1 
HETATM 26 C CMC HEM . . . B 2 22.64 -28.365 -7.24 1 29.45 ? CMC HEM 508 A 1 
HETATM 27 C CAC HEM . . . B 2 23.042 -26.364 -4.699 1 39.14 ? CAC HEM 508 A 1 
HETATM 28 C CBC HEM . . . B 2 23.551 -27.518 -4.273 1 43.24 ? CBC HEM 508 A 1 
HETATM 29 C C1D HEM . . . B 2 23.228 -22.267 -6.209 1 36.04 ? C1D HEM 508 A 1 
HETATM 30 C C2D HEM . . . B 2 23.365 -21.173 -5.297 1 37.57 ? C2D HEM 508 A 1 
HETATM 31 C C3D HEM . . . B 2 23.443 -19.952 -6.214 1 36.62 ? C3D HEM 508 A 1 
HETATM 32 C C4D HEM . . . B 2 23.323 -20.453 -7.586 1 35.39 ? C4D HEM 508 A 1 
HETATM 33 C CMD HEM . . . B 2 23.449 -21.215 -3.716 1 35.32 ? CMD HEM 508 A 1 
HETATM 34 C CAD HEM . . . B 2 23.642 -18.502 -5.735 1 32.95 ? CAD HEM 508 A 1 
HETATM 35 C CBD HEM . . . B 2 25.141 -18.409 -5.43 1 36.75 ? CBD HEM 508 A 1 
HETATM 36 C CGD HEM . . . B 2 25.427 -17.013 -4.807 1 40.88 ? CGD HEM 508 A 1 
HETATM 37 O O1D HEM . . . B 2 26.533 -16.756 -4.226 1 36.58 ? O1D HEM 508 A 1 
HETATM 38 O O2D HEM . . . B 2 24.496 -16.153 -4.912 1 39.29 ? O2D HEM 508 A 1 
HETATM 39 N NA HEM . . . B 2 23.072 -21.425 -10.5 1 29.3 ? NA HEM 508 A 1 
HETATM 40 N NB HEM . . . B 2 22.703 -24.136 -10.874 1 34.9 ? NB HEM 508 A 1 
HETATM 41 N NC HEM . . . B 2 22.882 -24.606 -8.046 1 33.51 ? NC HEM 508 A 1 
HETATM 42 N ND HEM . . . B 2 23.224 -21.841 -7.52 1 37.16 ? ND HEM 508 A 1 
HETATM 43 FE FE HEM . . . B 2 23.007 -23.073 -9.244 1 32.47 ? FE HEM 508 A 1 
#
_model_server_stats.io_time_ms              86 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#