data_3TJS
#
_model_server_result.job_id            Glotm6CIVAxbkpOicTVmDg 
_model_server_result.datetime_utc      '2024-11-21 18:01:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tjs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":600}' 
#
_entry.id    3TJS 
#
_exptl.entry_id    3TJS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              579.796 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(2S,4S,5S)-5-amino-4-hydroxy-1,6-diphenylhexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TJS 
_cell.length_a            78.79 
_cell.length_b            98.6 
_cell.length_c            125.07 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TJS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc2 B FE HEM . A HEM 508 1_555 C N11 D0R . A D0R 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
#
_chem_comp.formula           'C32 H45 N5 O3 S' 
_chem_comp.formula_weight    579.796 
_chem_comp.id                D0R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(2S,4S,5S)-5-amino-4-hydroxy-1,6-diphenylhexan-2-yl]-N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-L-valinamide 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     'desthiazolylmethyloxycarbonyl ritonavir' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N11 D0R sing 83 n n 
N11 HN11 D0R sing 84 n n 
N11 HN1A D0R sing 85 n n 
C26 C12 D0R sing 86 n n 
C12 C13 D0R sing 87 n n 
C12 H12 D0R sing 88 n n 
C13 C14 D0R sing 89 n n 
C13 O41 D0R sing 90 n n 
C13 H13 D0R sing 91 n n 
C14 C15 D0R sing 92 n n 
C14 H14 D0R sing 93 n n 
C14 H14A D0R sing 94 n n 
N58 C15 D0R sing 95 n n 
C15 C44 D0R sing 96 n n 
C15 H15 D0R sing 97 n n 
C19 C18 D0R sing 98 n n 
N58 C18 D0R sing 99 n n 
C18 O61 D0R doub 100 n n 
N20 C19 D0R sing 101 n n 
C19 C62 D0R sing 102 n n 
C19 H19 D0R sing 103 n n 
C21 N20 D0R sing 104 n n 
N20 HN20 D0R sing 105 n n 
N74 C21 D0R sing 106 n n 
C21 O76 D0R doub 107 n n 
C28 C26 D0R sing 108 n n 
C26 H26 D0R sing 109 n n 
C26 H26A D0R sing 110 n n 
C35 C28 D0R doub 111 n y 
C28 C31 D0R sing 112 n y 
C32 C31 D0R doub 113 n y 
C31 H31 D0R sing 114 n n 
C33 C32 D0R sing 115 n y 
C32 H32 D0R sing 116 n n 
C34 C33 D0R doub 117 n y 
C33 H33 D0R sing 118 n n 
C34 C35 D0R sing 119 n y 
C34 H34 D0R sing 120 n n 
C35 H35 D0R sing 121 n n 
O41 HO41 D0R sing 122 n n 
C44 C45 D0R sing 123 n n 
C44 H44 D0R sing 124 n n 
C44 H44A D0R sing 125 n n 
C52 C45 D0R doub 126 n y 
C45 C48 D0R sing 127 n y 
C48 C49 D0R doub 128 n y 
C48 H48 D0R sing 129 n n 
C50 C49 D0R sing 130 n y 
C49 H49 D0R sing 131 n n 
C51 C50 D0R doub 132 n y 
C50 H50 D0R sing 133 n n 
C52 C51 D0R sing 134 n y 
C51 H51 D0R sing 135 n n 
C52 H52 D0R sing 136 n n 
N58 HN58 D0R sing 137 n n 
C64 C62 D0R sing 138 n n 
C62 C68 D0R sing 139 n n 
C62 H62 D0R sing 140 n n 
C64 H64 D0R sing 141 n n 
C64 H64A D0R sing 142 n n 
C64 H64B D0R sing 143 n n 
C68 H68 D0R sing 144 n n 
C68 H68A D0R sing 145 n n 
C68 H68B D0R sing 146 n n 
C95 N74 D0R sing 147 n n 
C75 N74 D0R sing 148 n n 
C77 C75 D0R sing 149 n n 
C75 H75 D0R sing 150 n n 
C75 H75A D0R sing 151 n n 
N83 C77 D0R sing 152 n y 
C77 C80 D0R doub 153 n y 
S81 C80 D0R sing 154 n y 
C80 H80 D0R sing 155 n n 
C82 S81 D0R sing 156 n y 
C85 C82 D0R sing 157 n n 
C82 N83 D0R doub 158 n y 
C86 C85 D0R sing 159 n n 
C90 C85 D0R sing 160 n n 
C85 H85 D0R sing 161 n n 
C86 H86 D0R sing 162 n n 
C86 H86A D0R sing 163 n n 
C86 H86B D0R sing 164 n n 
C90 H90 D0R sing 165 n n 
C90 H90A D0R sing 166 n n 
C90 H90B D0R sing 167 n n 
C95 H95 D0R sing 168 n n 
C95 H95A D0R sing 169 n n 
C95 H95B D0R sing 170 n n 
#
_atom_sites.entry_id                     3TJS 
_atom_sites.fract_transf_matrix[1][1]    0.012692 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010142 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007996 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 508 500 HEM HEM . 
C 3 D0R A 1 600 600 D0R D0R . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C21 D0R . . . C 3 14.44 -18.585 -8.131 1 85.57 ? C21 D0R 600 A 1 
HETATM 2 N N74 D0R . . . C 3 13.228 -18.388 -8.673 1 91.49 ? N74 D0R 600 A 1 
HETATM 3 C C75 D0R . . . C 3 12.633 -17.077 -8.959 1 95.48 ? C75 D0R 600 A 1 
HETATM 4 O O76 D0R . . . C 3 14.816 -19.726 -7.968 1 88.06 ? O76 D0R 600 A 1 
HETATM 5 C C77 D0R . . . C 3 13.401 -16.369 -10.084 1 97.77 ? C77 D0R 600 A 1 
HETATM 6 C C80 D0R . . . C 3 13.709 -14.997 -10.003 1 99.05 ? C80 D0R 600 A 1 
HETATM 7 S S81 D0R . . . C 3 14.579 -14.566 -11.444 1 101.8 ? S81 D0R 600 A 1 
HETATM 8 C C82 D0R . . . C 3 14.533 -16.157 -12.135 1 97.85 ? C82 D0R 600 A 1 
HETATM 9 N N83 D0R . . . C 3 13.863 -16.974 -11.249 1 97.4 ? N83 D0R 600 A 1 
HETATM 10 C C85 D0R . . . C 3 15.191 -16.349 -13.477 1 95.97 ? C85 D0R 600 A 1 
HETATM 11 C C86 D0R . . . C 3 15.222 -15.099 -14.359 1 93.2 ? C86 D0R 600 A 1 
HETATM 12 C C90 D0R . . . C 3 14.513 -17.489 -14.235 1 96.93 ? C90 D0R 600 A 1 
HETATM 13 C C95 D0R . . . C 3 12.54 -19.414 -8.98 1 90.92 ? C95 D0R 600 A 1 
HETATM 14 N N20 D0R . . . C 3 15.186 -17.537 -7.755 1 78.97 ? N20 D0R 600 A 1 
HETATM 15 C C19 D0R . . . C 3 16.564 -17.5 -7.195 1 72.78 ? C19 D0R 600 A 1 
HETATM 16 C C18 D0R . . . C 3 17.111 -18.553 -6.238 1 69.36 ? C18 D0R 600 A 1 
HETATM 17 O O61 D0R . . . C 3 17.558 -18.376 -5.101 1 65.22 ? O61 D0R 600 A 1 
HETATM 18 C C62 D0R . . . C 3 16.887 -16.086 -6.819 1 71.17 ? C62 D0R 600 A 1 
HETATM 19 C C64 D0R . . . C 3 17.658 -15.511 -8 1 69.6 ? C64 D0R 600 A 1 
HETATM 20 C C68 D0R . . . C 3 15.61 -15.323 -6.503 1 72.32 ? C68 D0R 600 A 1 
HETATM 21 N N11 D0R . . . C 3 20.921 -23.098 -8.949 1 40.07 ? N11 D0R 600 A 1 
HETATM 22 C C12 D0R . . . C 3 20.114 -21.974 -9.243 1 53.42 ? C12 D0R 600 A 1 
HETATM 23 C C13 D0R . . . C 3 19.218 -22.22 -8.001 1 59.07 ? C13 D0R 600 A 1 
HETATM 24 C C14 D0R . . . C 3 17.84 -21.587 -7.962 1 63.34 ? C14 D0R 600 A 1 
HETATM 25 C C15 D0R . . . C 3 17.511 -21.016 -6.567 1 67.47 ? C15 D0R 600 A 1 
HETATM 26 C C26 D0R . . . C 3 18.98 -21.912 -10.254 1 53.21 ? C26 D0R 600 A 1 
HETATM 27 C C28 D0R . . . C 3 18.648 -20.594 -10.889 1 47.19 ? C28 D0R 600 A 1 
HETATM 28 C C31 D0R . . . C 3 19.492 -19.492 -10.671 1 45.35 ? C31 D0R 600 A 1 
HETATM 29 C C32 D0R . . . C 3 19.226 -18.254 -11.218 1 41.77 ? C32 D0R 600 A 1 
HETATM 30 C C33 D0R . . . C 3 18.062 -18.109 -12.006 1 46.41 ? C33 D0R 600 A 1 
HETATM 31 C C34 D0R . . . C 3 17.217 -19.201 -12.249 1 47.25 ? C34 D0R 600 A 1 
HETATM 32 C C35 D0R . . . C 3 17.506 -20.452 -11.664 1 47.48 ? C35 D0R 600 A 1 
HETATM 33 O O41 D0R . . . C 3 19.871 -21.906 -6.747 1 65.89 ? O41 D0R 600 A 1 
HETATM 34 C C44 D0R . . . C 3 16.579 -21.803 -5.639 1 71.45 ? C44 D0R 600 A 1 
HETATM 35 C C45 D0R . . . C 3 15.372 -21.342 -4.874 1 74.87 ? C45 D0R 600 A 1 
HETATM 36 C C48 D0R . . . C 3 14.77 -22.24 -4.01 1 75.29 ? C48 D0R 600 A 1 
HETATM 37 C C49 D0R . . . C 3 13.63 -21.903 -3.295 1 76.15 ? C49 D0R 600 A 1 
HETATM 38 C C50 D0R . . . C 3 13.082 -20.631 -3.4 1 78.72 ? C50 D0R 600 A 1 
HETATM 39 C C51 D0R . . . C 3 13.672 -19.687 -4.238 1 76.97 ? C51 D0R 600 A 1 
HETATM 40 C C52 D0R . . . C 3 14.801 -20.061 -4.965 1 76.91 ? C52 D0R 600 A 1 
HETATM 41 N N58 D0R . . . C 3 17.081 -19.688 -6.905 1 66.96 ? N58 D0R 600 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           41 
#