data_3TK6 # _model_server_result.job_id 1gteZMup_WvIf_D6dSsF_A _model_server_result.datetime_utc '2024-12-22 06:29:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tk6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":261}' # _entry.id 3TK6 # _exptl.entry_id 3TK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TK6 _cell.length_a 56.466 _cell.length_b 72.412 _cell.length_c 79.074 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 48 B CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf6 B SG CYS 5 B CYS 89 1_555 B SG CYS 16 B CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf7 B SG CYS 12 B CYS 96 1_555 B SG CYS 25 B CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? disulf ? disulf8 B SG CYS 27 B CYS 111 1_555 B SG CYS 40 B CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc1 A OD1 ASP 56 A ASP 70 1_555 D CA CA . A CA 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc2 A O ASN 58 A ASN 72 1_555 D CA CA . A CA 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc3 A O GLN 61 A GLN 75 1_555 D CA CA . A CA 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc4 A OE2 GLU 66 A GLU 80 1_555 D CA CA . A CA 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 A O TYR 173 A TYR 185 1_555 C CA CA . A CA 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc6 A O ASP 174 A ASP 185 1_555 C CA CA . A CA 261 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc7 A O ARG 211 A ARG 222 1_555 C CA CA . A CA 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc8 A O LYS 214 A LYS 224 1_555 C CA CA . A CA 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc9 F O HOH . A HOH 258 1_555 D CA CA . A CA 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc10 C CA CA . A CA 261 1_555 F O HOH . A HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc11 C CA CA . A CA 261 1_555 F O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc12 D CA CA . A CA 262 1_555 F O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TK6 _atom_sites.fract_transf_matrix[1][1] 0.01771 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01381 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012646 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 261 261 CA CA . D 3 CA A 1 262 262 CA CA . E 4 D46 A 1 700 700 D46 D46 . F 5 HOH A 1 5 5 HOH HOH . F 5 HOH A 2 6 6 HOH HOH . F 5 HOH A 3 7 7 HOH HOH . F 5 HOH A 4 8 8 HOH HOH . F 5 HOH A 5 9 9 HOH HOH . F 5 HOH A 6 10 10 HOH HOH . F 5 HOH A 7 11 11 HOH HOH . F 5 HOH A 8 12 12 HOH HOH . F 5 HOH A 9 13 13 HOH HOH . F 5 HOH A 10 15 15 HOH HOH . F 5 HOH A 11 146 146 HOH HOH . F 5 HOH A 12 244 244 HOH HOH . F 5 HOH A 13 245 245 HOH HOH . F 5 HOH A 14 246 246 HOH HOH . F 5 HOH A 15 247 16 HOH HOH . F 5 HOH A 16 248 248 HOH HOH . F 5 HOH A 17 249 17 HOH HOH . F 5 HOH A 18 250 250 HOH HOH . F 5 HOH A 19 251 18 HOH HOH . F 5 HOH A 20 252 20 HOH HOH . F 5 HOH A 21 253 253 HOH HOH . F 5 HOH A 22 254 254 HOH HOH . F 5 HOH A 23 255 21 HOH HOH . F 5 HOH A 24 256 22 HOH HOH . F 5 HOH A 25 257 24 HOH HOH . F 5 HOH A 26 258 25 HOH HOH . F 5 HOH A 27 259 26 HOH HOH . F 5 HOH A 28 260 27 HOH HOH . F 5 HOH A 29 263 29 HOH HOH . F 5 HOH A 30 264 30 HOH HOH . F 5 HOH A 31 265 31 HOH HOH . F 5 HOH A 32 266 34 HOH HOH . F 5 HOH A 33 267 35 HOH HOH . F 5 HOH A 34 268 36 HOH HOH . F 5 HOH A 35 269 37 HOH HOH . F 5 HOH A 36 270 38 HOH HOH . F 5 HOH A 37 271 40 HOH HOH . F 5 HOH A 38 272 41 HOH HOH . F 5 HOH A 39 273 43 HOH HOH . F 5 HOH A 40 274 44 HOH HOH . F 5 HOH A 41 275 45 HOH HOH . F 5 HOH A 42 276 46 HOH HOH . F 5 HOH A 43 277 47 HOH HOH . F 5 HOH A 44 278 49 HOH HOH . F 5 HOH A 45 279 50 HOH HOH . F 5 HOH A 46 280 51 HOH HOH . F 5 HOH A 47 281 53 HOH HOH . F 5 HOH A 48 282 54 HOH HOH . F 5 HOH A 49 283 56 HOH HOH . F 5 HOH A 50 284 58 HOH HOH . F 5 HOH A 51 285 60 HOH HOH . F 5 HOH A 52 286 62 HOH HOH . F 5 HOH A 53 287 63 HOH HOH . F 5 HOH A 54 288 64 HOH HOH . F 5 HOH A 55 289 65 HOH HOH . F 5 HOH A 56 290 66 HOH HOH . F 5 HOH A 57 291 69 HOH HOH . F 5 HOH A 58 292 71 HOH HOH . F 5 HOH A 59 293 73 HOH HOH . F 5 HOH A 60 294 74 HOH HOH . F 5 HOH A 61 295 75 HOH HOH . F 5 HOH A 62 296 77 HOH HOH . F 5 HOH A 63 297 78 HOH HOH . F 5 HOH A 64 299 80 HOH HOH . F 5 HOH A 65 300 82 HOH HOH . F 5 HOH A 66 301 83 HOH HOH . F 5 HOH A 67 302 84 HOH HOH . F 5 HOH A 68 303 85 HOH HOH . F 5 HOH A 69 304 86 HOH HOH . F 5 HOH A 70 305 87 HOH HOH . F 5 HOH A 71 306 89 HOH HOH . F 5 HOH A 72 307 90 HOH HOH . F 5 HOH A 73 308 91 HOH HOH . F 5 HOH A 74 309 92 HOH HOH . F 5 HOH A 75 310 94 HOH HOH . F 5 HOH A 76 311 95 HOH HOH . F 5 HOH A 77 312 96 HOH HOH . F 5 HOH A 78 313 97 HOH HOH . F 5 HOH A 79 314 98 HOH HOH . F 5 HOH A 80 315 99 HOH HOH . F 5 HOH A 81 316 101 HOH HOH . F 5 HOH A 82 317 103 HOH HOH . F 5 HOH A 83 318 104 HOH HOH . F 5 HOH A 84 319 105 HOH HOH . F 5 HOH A 85 320 106 HOH HOH . F 5 HOH A 86 321 108 HOH HOH . F 5 HOH A 87 322 109 HOH HOH . F 5 HOH A 88 323 110 HOH HOH . F 5 HOH A 89 324 113 HOH HOH . F 5 HOH A 90 325 114 HOH HOH . F 5 HOH A 91 326 115 HOH HOH . F 5 HOH A 92 327 116 HOH HOH . F 5 HOH A 93 328 118 HOH HOH . F 5 HOH A 94 329 120 HOH HOH . F 5 HOH A 95 330 122 HOH HOH . F 5 HOH A 96 331 123 HOH HOH . F 5 HOH A 97 332 125 HOH HOH . F 5 HOH A 98 333 128 HOH HOH . F 5 HOH A 99 334 129 HOH HOH . F 5 HOH A 100 335 132 HOH HOH . F 5 HOH A 101 336 133 HOH HOH . F 5 HOH A 102 337 134 HOH HOH . F 5 HOH A 103 338 135 HOH HOH . F 5 HOH A 104 339 136 HOH HOH . F 5 HOH A 105 340 137 HOH HOH . F 5 HOH A 106 341 138 HOH HOH . F 5 HOH A 107 342 139 HOH HOH . F 5 HOH A 108 343 142 HOH HOH . F 5 HOH A 109 344 143 HOH HOH . F 5 HOH A 110 345 145 HOH HOH . F 5 HOH A 111 346 149 HOH HOH . F 5 HOH A 112 347 153 HOH HOH . F 5 HOH A 113 348 154 HOH HOH . F 5 HOH A 114 349 156 HOH HOH . F 5 HOH A 115 350 157 HOH HOH . F 5 HOH A 116 351 158 HOH HOH . F 5 HOH A 117 352 161 HOH HOH . F 5 HOH A 118 353 162 HOH HOH . F 5 HOH A 119 354 163 HOH HOH . F 5 HOH A 120 355 164 HOH HOH . F 5 HOH A 121 356 165 HOH HOH . F 5 HOH A 122 357 166 HOH HOH . F 5 HOH A 123 358 167 HOH HOH . F 5 HOH A 124 359 169 HOH HOH . F 5 HOH A 125 360 173 HOH HOH . F 5 HOH A 126 361 175 HOH HOH . F 5 HOH A 127 362 177 HOH HOH . F 5 HOH A 128 363 178 HOH HOH . F 5 HOH A 129 364 179 HOH HOH . F 5 HOH A 130 365 180 HOH HOH . F 5 HOH A 131 366 182 HOH HOH . F 5 HOH A 132 367 183 HOH HOH . F 5 HOH A 133 368 184 HOH HOH . F 5 HOH A 134 369 185 HOH HOH . F 5 HOH A 135 370 187 HOH HOH . F 5 HOH A 136 371 189 HOH HOH . F 5 HOH A 137 372 190 HOH HOH . F 5 HOH A 138 373 191 HOH HOH . F 5 HOH A 139 374 194 HOH HOH . F 5 HOH A 140 375 196 HOH HOH . F 5 HOH A 141 376 199 HOH HOH . F 5 HOH A 142 377 200 HOH HOH . F 5 HOH A 143 378 202 HOH HOH . F 5 HOH A 144 379 203 HOH HOH . F 5 HOH A 145 380 205 HOH HOH . F 5 HOH A 146 381 206 HOH HOH . F 5 HOH A 147 382 207 HOH HOH . F 5 HOH A 148 383 208 HOH HOH . F 5 HOH A 149 384 209 HOH HOH . F 5 HOH A 150 385 210 HOH HOH . F 5 HOH A 151 386 212 HOH HOH . F 5 HOH A 152 387 213 HOH HOH . F 5 HOH A 153 388 216 HOH HOH . F 5 HOH A 154 389 217 HOH HOH . F 5 HOH A 155 390 218 HOH HOH . F 5 HOH A 156 391 221 HOH HOH . F 5 HOH A 157 392 222 HOH HOH . F 5 HOH A 158 393 225 HOH HOH . F 5 HOH A 159 394 226 HOH HOH . F 5 HOH A 160 395 227 HOH HOH . F 5 HOH A 161 396 228 HOH HOH . F 5 HOH A 162 397 231 HOH HOH . F 5 HOH A 163 398 233 HOH HOH . F 5 HOH A 164 399 236 HOH HOH . F 5 HOH A 165 400 239 HOH HOH . F 5 HOH A 166 401 240 HOH HOH . F 5 HOH A 167 402 243 HOH HOH . G 5 HOH B 1 3 3 HOH HOH . G 5 HOH B 2 28 28 HOH HOH . G 5 HOH B 3 33 33 HOH HOH . G 5 HOH B 4 42 42 HOH HOH . G 5 HOH B 5 48 48 HOH HOH . G 5 HOH B 6 52 52 HOH HOH . G 5 HOH B 7 55 55 HOH HOH . G 5 HOH B 8 57 57 HOH HOH . G 5 HOH B 9 59 59 HOH HOH . G 5 HOH B 10 67 67 HOH HOH . G 5 HOH B 11 68 68 HOH HOH . G 5 HOH B 12 70 70 HOH HOH . G 5 HOH B 13 72 72 HOH HOH . G 5 HOH B 14 76 76 HOH HOH . G 5 HOH B 15 81 81 HOH HOH . G 5 HOH B 16 139 88 HOH HOH . G 5 HOH B 17 140 100 HOH HOH . G 5 HOH B 18 141 107 HOH HOH . G 5 HOH B 19 142 111 HOH HOH . G 5 HOH B 20 143 112 HOH HOH . G 5 HOH B 21 144 144 HOH HOH . G 5 HOH B 22 145 117 HOH HOH . G 5 HOH B 23 146 119 HOH HOH . G 5 HOH B 24 147 147 HOH HOH . G 5 HOH B 25 148 121 HOH HOH . G 5 HOH B 26 149 124 HOH HOH . G 5 HOH B 27 150 150 HOH HOH . G 5 HOH B 28 151 151 HOH HOH . G 5 HOH B 29 152 152 HOH HOH . G 5 HOH B 30 153 127 HOH HOH . G 5 HOH B 31 154 130 HOH HOH . G 5 HOH B 32 155 131 HOH HOH . G 5 HOH B 33 160 160 HOH HOH . G 5 HOH B 34 168 168 HOH HOH . G 5 HOH B 35 171 171 HOH HOH . G 5 HOH B 36 172 172 HOH HOH . G 5 HOH B 37 174 174 HOH HOH . G 5 HOH B 38 186 186 HOH HOH . G 5 HOH B 39 188 188 HOH HOH . G 5 HOH B 40 197 197 HOH HOH . G 5 HOH B 41 204 204 HOH HOH . G 5 HOH B 42 211 211 HOH HOH . G 5 HOH B 43 214 214 HOH HOH . G 5 HOH B 44 219 219 HOH HOH . G 5 HOH B 45 220 220 HOH HOH . G 5 HOH B 46 223 223 HOH HOH . G 5 HOH B 47 232 232 HOH HOH . G 5 HOH B 48 235 235 HOH HOH . G 5 HOH B 49 238 238 HOH HOH . G 5 HOH B 50 247 247 HOH HOH . G 5 HOH B 51 249 249 HOH HOH . G 5 HOH B 52 251 251 HOH HOH . G 5 HOH B 53 252 252 HOH HOH . G 5 HOH B 54 255 255 HOH HOH . G 5 HOH B 55 256 256 HOH HOH . G 5 HOH B 56 298 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.925 _atom_site.Cartn_y 1.324 _atom_site.Cartn_z 34.27 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 261 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #