data_3TKU # _model_server_result.job_id lqY9untdy7dVLfNCKkTrxg _model_server_result.datetime_utc '2024-11-26 15:25:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tku # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":420}' # _entry.id 3TKU # _exptl.entry_id 3TKU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.13 _cell.angle_gamma 90 _cell.entry_id 3TKU _cell.length_a 44.95 _cell.length_b 123.52 _cell.length_c 84.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TKU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3TKU _atom_sites.fract_transf_matrix[1][1] 0.022247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004377 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 M77 A 1 418 418 M77 M77 . D 2 M77 A 1 419 419 M77 M77 . E 3 EDO A 1 420 420 EDO EDO . F 2 M77 B 1 418 418 M77 M77 . G 2 M77 B 1 419 419 M77 M77 . H 3 EDO B 1 420 420 EDO EDO . I 4 HOH A 1 421 421 HOH HOH . I 4 HOH A 2 422 422 HOH HOH . I 4 HOH A 3 423 423 HOH HOH . I 4 HOH A 4 424 424 HOH HOH . I 4 HOH A 5 425 425 HOH HOH . I 4 HOH A 6 426 426 HOH HOH . I 4 HOH A 7 427 427 HOH HOH . I 4 HOH A 8 428 428 HOH HOH . I 4 HOH A 9 429 429 HOH HOH . I 4 HOH A 10 430 430 HOH HOH . I 4 HOH A 11 431 431 HOH HOH . I 4 HOH A 12 432 432 HOH HOH . I 4 HOH A 13 433 433 HOH HOH . I 4 HOH A 14 434 434 HOH HOH . I 4 HOH A 15 435 435 HOH HOH . I 4 HOH A 16 436 436 HOH HOH . I 4 HOH A 17 437 437 HOH HOH . I 4 HOH A 18 438 438 HOH HOH . I 4 HOH A 19 439 439 HOH HOH . I 4 HOH A 20 440 440 HOH HOH . I 4 HOH A 21 441 441 HOH HOH . I 4 HOH A 22 442 442 HOH HOH . I 4 HOH A 23 443 443 HOH HOH . I 4 HOH A 24 444 444 HOH HOH . I 4 HOH A 25 445 445 HOH HOH . I 4 HOH A 26 446 446 HOH HOH . I 4 HOH A 27 447 447 HOH HOH . I 4 HOH A 28 448 448 HOH HOH . I 4 HOH A 29 449 449 HOH HOH . I 4 HOH A 30 450 450 HOH HOH . I 4 HOH A 31 451 451 HOH HOH . I 4 HOH A 32 452 452 HOH HOH . I 4 HOH A 33 453 453 HOH HOH . I 4 HOH A 34 454 454 HOH HOH . I 4 HOH A 35 455 455 HOH HOH . I 4 HOH A 36 456 456 HOH HOH . I 4 HOH A 37 457 457 HOH HOH . I 4 HOH A 38 458 458 HOH HOH . I 4 HOH A 39 459 459 HOH HOH . I 4 HOH A 40 460 460 HOH HOH . I 4 HOH A 41 461 461 HOH HOH . I 4 HOH A 42 462 462 HOH HOH . I 4 HOH A 43 463 463 HOH HOH . I 4 HOH A 44 464 464 HOH HOH . I 4 HOH A 45 465 465 HOH HOH . I 4 HOH A 46 466 466 HOH HOH . I 4 HOH A 47 467 467 HOH HOH . I 4 HOH A 48 468 468 HOH HOH . I 4 HOH A 49 469 469 HOH HOH . I 4 HOH A 50 470 470 HOH HOH . I 4 HOH A 51 471 471 HOH HOH . I 4 HOH A 52 472 472 HOH HOH . I 4 HOH A 53 473 473 HOH HOH . I 4 HOH A 54 474 474 HOH HOH . I 4 HOH A 55 475 475 HOH HOH . I 4 HOH A 56 476 476 HOH HOH . I 4 HOH A 57 477 477 HOH HOH . I 4 HOH A 58 478 478 HOH HOH . I 4 HOH A 59 479 479 HOH HOH . I 4 HOH A 60 480 480 HOH HOH . I 4 HOH A 61 481 481 HOH HOH . I 4 HOH A 62 482 482 HOH HOH . I 4 HOH A 63 483 483 HOH HOH . I 4 HOH A 64 484 484 HOH HOH . I 4 HOH A 65 485 485 HOH HOH . I 4 HOH A 66 486 486 HOH HOH . I 4 HOH A 67 487 487 HOH HOH . I 4 HOH A 68 488 488 HOH HOH . I 4 HOH A 69 489 489 HOH HOH . I 4 HOH A 70 490 490 HOH HOH . I 4 HOH A 71 491 491 HOH HOH . I 4 HOH A 72 492 492 HOH HOH . I 4 HOH A 73 493 493 HOH HOH . I 4 HOH A 74 494 494 HOH HOH . I 4 HOH A 75 495 495 HOH HOH . I 4 HOH A 76 496 496 HOH HOH . I 4 HOH A 77 497 497 HOH HOH . I 4 HOH A 78 498 498 HOH HOH . I 4 HOH A 79 499 499 HOH HOH . I 4 HOH A 80 500 500 HOH HOH . I 4 HOH A 81 501 501 HOH HOH . I 4 HOH A 82 502 502 HOH HOH . I 4 HOH A 83 503 503 HOH HOH . I 4 HOH A 84 504 504 HOH HOH . I 4 HOH A 85 505 505 HOH HOH . I 4 HOH A 86 506 506 HOH HOH . I 4 HOH A 87 507 507 HOH HOH . I 4 HOH A 88 508 508 HOH HOH . I 4 HOH A 89 509 509 HOH HOH . I 4 HOH A 90 510 510 HOH HOH . I 4 HOH A 91 511 511 HOH HOH . I 4 HOH A 92 512 512 HOH HOH . I 4 HOH A 93 513 513 HOH HOH . I 4 HOH A 94 514 514 HOH HOH . I 4 HOH A 95 515 515 HOH HOH . I 4 HOH A 96 516 516 HOH HOH . I 4 HOH A 97 517 517 HOH HOH . I 4 HOH A 98 518 518 HOH HOH . I 4 HOH A 99 519 519 HOH HOH . I 4 HOH A 100 520 520 HOH HOH . I 4 HOH A 101 521 521 HOH HOH . I 4 HOH A 102 522 522 HOH HOH . I 4 HOH A 103 523 523 HOH HOH . I 4 HOH A 104 524 524 HOH HOH . I 4 HOH A 105 525 525 HOH HOH . I 4 HOH A 106 526 526 HOH HOH . I 4 HOH A 107 527 527 HOH HOH . I 4 HOH A 108 528 528 HOH HOH . I 4 HOH A 109 529 529 HOH HOH . J 4 HOH B 1 421 421 HOH HOH . J 4 HOH B 2 422 422 HOH HOH . J 4 HOH B 3 423 423 HOH HOH . J 4 HOH B 4 424 424 HOH HOH . J 4 HOH B 5 425 425 HOH HOH . J 4 HOH B 6 426 426 HOH HOH . J 4 HOH B 7 427 427 HOH HOH . J 4 HOH B 8 428 428 HOH HOH . J 4 HOH B 9 429 429 HOH HOH . J 4 HOH B 10 430 430 HOH HOH . J 4 HOH B 11 431 431 HOH HOH . J 4 HOH B 12 432 432 HOH HOH . J 4 HOH B 13 433 433 HOH HOH . J 4 HOH B 14 434 434 HOH HOH . J 4 HOH B 15 435 435 HOH HOH . J 4 HOH B 16 436 436 HOH HOH . J 4 HOH B 17 437 437 HOH HOH . J 4 HOH B 18 438 438 HOH HOH . J 4 HOH B 19 439 439 HOH HOH . J 4 HOH B 20 440 440 HOH HOH . J 4 HOH B 21 441 441 HOH HOH . J 4 HOH B 22 442 442 HOH HOH . J 4 HOH B 23 443 443 HOH HOH . J 4 HOH B 24 444 444 HOH HOH . J 4 HOH B 25 445 445 HOH HOH . J 4 HOH B 26 446 446 HOH HOH . J 4 HOH B 27 447 447 HOH HOH . J 4 HOH B 28 448 448 HOH HOH . J 4 HOH B 29 449 449 HOH HOH . J 4 HOH B 30 450 450 HOH HOH . J 4 HOH B 31 451 451 HOH HOH . J 4 HOH B 32 452 452 HOH HOH . J 4 HOH B 33 453 453 HOH HOH . J 4 HOH B 34 454 454 HOH HOH . J 4 HOH B 35 455 455 HOH HOH . J 4 HOH B 36 456 456 HOH HOH . J 4 HOH B 37 457 457 HOH HOH . J 4 HOH B 38 458 458 HOH HOH . J 4 HOH B 39 459 459 HOH HOH . J 4 HOH B 40 460 460 HOH HOH . J 4 HOH B 41 461 461 HOH HOH . J 4 HOH B 42 462 462 HOH HOH . J 4 HOH B 43 463 463 HOH HOH . J 4 HOH B 44 464 464 HOH HOH . J 4 HOH B 45 465 465 HOH HOH . J 4 HOH B 46 466 466 HOH HOH . J 4 HOH B 47 467 467 HOH HOH . J 4 HOH B 48 468 468 HOH HOH . J 4 HOH B 49 469 469 HOH HOH . J 4 HOH B 50 470 470 HOH HOH . J 4 HOH B 51 471 471 HOH HOH . J 4 HOH B 52 472 472 HOH HOH . J 4 HOH B 53 473 473 HOH HOH . J 4 HOH B 54 474 474 HOH HOH . J 4 HOH B 55 475 475 HOH HOH . J 4 HOH B 56 476 476 HOH HOH . J 4 HOH B 57 477 477 HOH HOH . J 4 HOH B 58 478 478 HOH HOH . J 4 HOH B 59 479 479 HOH HOH . J 4 HOH B 60 480 480 HOH HOH . J 4 HOH B 61 481 481 HOH HOH . J 4 HOH B 62 482 482 HOH HOH . J 4 HOH B 63 483 483 HOH HOH . J 4 HOH B 64 484 484 HOH HOH . J 4 HOH B 65 485 485 HOH HOH . J 4 HOH B 66 486 486 HOH HOH . J 4 HOH B 67 487 487 HOH HOH . J 4 HOH B 68 488 488 HOH HOH . J 4 HOH B 69 489 489 HOH HOH . J 4 HOH B 70 490 490 HOH HOH . J 4 HOH B 71 491 491 HOH HOH . J 4 HOH B 72 492 492 HOH HOH . J 4 HOH B 73 493 493 HOH HOH . J 4 HOH B 74 494 494 HOH HOH . J 4 HOH B 75 495 495 HOH HOH . J 4 HOH B 76 496 496 HOH HOH . J 4 HOH B 77 497 497 HOH HOH . J 4 HOH B 78 498 498 HOH HOH . J 4 HOH B 79 499 499 HOH HOH . J 4 HOH B 80 500 500 HOH HOH . J 4 HOH B 81 501 501 HOH HOH . J 4 HOH B 82 502 502 HOH HOH . J 4 HOH B 83 503 503 HOH HOH . J 4 HOH B 84 504 504 HOH HOH . J 4 HOH B 85 505 505 HOH HOH . J 4 HOH B 86 506 506 HOH HOH . J 4 HOH B 87 507 507 HOH HOH . J 4 HOH B 88 508 508 HOH HOH . J 4 HOH B 89 509 509 HOH HOH . J 4 HOH B 90 510 510 HOH HOH . J 4 HOH B 91 511 511 HOH HOH . J 4 HOH B 92 512 512 HOH HOH . J 4 HOH B 93 513 513 HOH HOH . J 4 HOH B 94 514 514 HOH HOH . J 4 HOH B 95 515 515 HOH HOH . J 4 HOH B 96 516 516 HOH HOH . J 4 HOH B 97 517 517 HOH HOH . J 4 HOH B 98 518 518 HOH HOH . J 4 HOH B 99 519 519 HOH HOH . J 4 HOH B 100 520 520 HOH HOH . J 4 HOH B 101 521 521 HOH HOH . J 4 HOH B 102 522 522 HOH HOH . J 4 HOH B 103 523 523 HOH HOH . J 4 HOH B 104 524 524 HOH HOH . J 4 HOH B 105 525 525 HOH HOH . J 4 HOH B 106 526 526 HOH HOH . J 4 HOH B 107 527 527 HOH HOH . J 4 HOH B 108 528 528 HOH HOH . J 4 HOH B 109 529 529 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 3 6.935 -16.121 26.609 1 32.27 ? C1 EDO 420 B 1 HETATM 2 O O1 EDO . . . H 3 5.825 -16.523 27.464 1 39.08 ? O1 EDO 420 B 1 HETATM 3 C C2 EDO . . . H 3 6.556 -14.824 25.895 1 39.56 ? C2 EDO 420 B 1 HETATM 4 O O2 EDO . . . H 3 7.122 -13.57 26.352 1 36.78 ? O2 EDO 420 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #