data_3TL3 # _model_server_result.job_id mPTLFVHTmHISj8eXYRHAFg _model_server_result.datetime_utc '2025-02-27 11:49:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tl3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":254}' # _entry.id 3TL3 # _exptl.entry_id 3TL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3TL3 _cell.length_a 54.946 _cell.length_b 73.245 _cell.length_c 109.553 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TL3 _atom_sites.fract_transf_matrix[1][1] 0.0182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA B 1 254 1 NA NA . D 3 HOH A 1 254 6 HOH HOH . D 3 HOH A 2 255 9 HOH HOH . D 3 HOH A 3 256 256 HOH HOH . D 3 HOH A 4 257 10 HOH HOH . D 3 HOH A 5 258 258 HOH HOH . D 3 HOH A 6 259 13 HOH HOH . D 3 HOH A 7 260 19 HOH HOH . D 3 HOH A 8 261 20 HOH HOH . D 3 HOH A 9 262 23 HOH HOH . D 3 HOH A 10 263 24 HOH HOH . D 3 HOH A 11 264 25 HOH HOH . D 3 HOH A 12 265 27 HOH HOH . D 3 HOH A 13 266 34 HOH HOH . D 3 HOH A 14 267 35 HOH HOH . D 3 HOH A 15 268 36 HOH HOH . D 3 HOH A 16 269 37 HOH HOH . D 3 HOH A 17 270 39 HOH HOH . D 3 HOH A 18 271 40 HOH HOH . D 3 HOH A 19 272 42 HOH HOH . D 3 HOH A 20 273 44 HOH HOH . D 3 HOH A 21 274 45 HOH HOH . D 3 HOH A 22 275 275 HOH HOH . D 3 HOH A 23 276 276 HOH HOH . D 3 HOH A 24 277 277 HOH HOH . D 3 HOH A 25 278 46 HOH HOH . D 3 HOH A 26 279 51 HOH HOH . D 3 HOH A 27 280 280 HOH HOH . D 3 HOH A 28 281 281 HOH HOH . D 3 HOH A 29 282 282 HOH HOH . D 3 HOH A 30 283 283 HOH HOH . D 3 HOH A 31 284 284 HOH HOH . D 3 HOH A 32 285 285 HOH HOH . D 3 HOH A 33 286 53 HOH HOH . D 3 HOH A 34 287 55 HOH HOH . D 3 HOH A 35 288 56 HOH HOH . D 3 HOH A 36 289 58 HOH HOH . D 3 HOH A 37 290 61 HOH HOH . D 3 HOH A 38 291 66 HOH HOH . D 3 HOH A 39 292 69 HOH HOH . D 3 HOH A 40 293 71 HOH HOH . D 3 HOH A 41 294 72 HOH HOH . D 3 HOH A 42 295 75 HOH HOH . D 3 HOH A 43 296 296 HOH HOH . D 3 HOH A 44 297 297 HOH HOH . D 3 HOH A 45 298 76 HOH HOH . D 3 HOH A 46 299 77 HOH HOH . D 3 HOH A 47 300 80 HOH HOH . D 3 HOH A 48 301 81 HOH HOH . D 3 HOH A 49 302 84 HOH HOH . D 3 HOH A 50 303 303 HOH HOH . D 3 HOH A 51 304 86 HOH HOH . D 3 HOH A 52 305 87 HOH HOH . D 3 HOH A 53 306 92 HOH HOH . D 3 HOH A 54 307 93 HOH HOH . D 3 HOH A 55 308 95 HOH HOH . D 3 HOH A 56 309 98 HOH HOH . D 3 HOH A 57 310 310 HOH HOH . D 3 HOH A 58 311 311 HOH HOH . D 3 HOH A 59 312 99 HOH HOH . D 3 HOH A 60 313 100 HOH HOH . D 3 HOH A 61 314 314 HOH HOH . D 3 HOH A 62 315 315 HOH HOH . D 3 HOH A 63 316 316 HOH HOH . D 3 HOH A 64 317 103 HOH HOH . D 3 HOH A 65 318 108 HOH HOH . D 3 HOH A 66 319 110 HOH HOH . D 3 HOH A 67 320 320 HOH HOH . D 3 HOH A 68 321 111 HOH HOH . D 3 HOH A 69 322 113 HOH HOH . D 3 HOH A 70 323 323 HOH HOH . D 3 HOH A 71 324 324 HOH HOH . D 3 HOH A 72 325 114 HOH HOH . D 3 HOH A 73 326 115 HOH HOH . D 3 HOH A 74 327 327 HOH HOH . D 3 HOH A 75 328 117 HOH HOH . D 3 HOH A 76 329 118 HOH HOH . D 3 HOH A 77 330 120 HOH HOH . D 3 HOH A 78 331 122 HOH HOH . D 3 HOH A 79 332 125 HOH HOH . D 3 HOH A 80 333 126 HOH HOH . D 3 HOH A 81 334 334 HOH HOH . D 3 HOH A 82 335 127 HOH HOH . D 3 HOH A 83 336 129 HOH HOH . D 3 HOH A 84 337 131 HOH HOH . D 3 HOH A 85 338 132 HOH HOH . D 3 HOH A 86 339 136 HOH HOH . D 3 HOH A 87 340 138 HOH HOH . D 3 HOH A 88 341 141 HOH HOH . D 3 HOH A 89 342 143 HOH HOH . D 3 HOH A 90 343 343 HOH HOH . D 3 HOH A 91 344 344 HOH HOH . D 3 HOH A 92 345 345 HOH HOH . D 3 HOH A 93 346 146 HOH HOH . D 3 HOH A 94 347 147 HOH HOH . D 3 HOH A 95 348 150 HOH HOH . D 3 HOH A 96 349 153 HOH HOH . D 3 HOH A 97 350 154 HOH HOH . D 3 HOH A 98 351 155 HOH HOH . D 3 HOH A 99 352 352 HOH HOH . D 3 HOH A 100 353 353 HOH HOH . D 3 HOH A 101 354 157 HOH HOH . D 3 HOH A 102 355 162 HOH HOH . D 3 HOH A 103 356 164 HOH HOH . D 3 HOH A 104 357 165 HOH HOH . D 3 HOH A 105 358 167 HOH HOH . D 3 HOH A 106 359 168 HOH HOH . D 3 HOH A 107 360 169 HOH HOH . D 3 HOH A 108 361 173 HOH HOH . D 3 HOH A 109 362 175 HOH HOH . D 3 HOH A 110 363 178 HOH HOH . D 3 HOH A 111 364 180 HOH HOH . D 3 HOH A 112 365 182 HOH HOH . D 3 HOH A 113 366 184 HOH HOH . D 3 HOH A 114 367 186 HOH HOH . D 3 HOH A 115 368 189 HOH HOH . D 3 HOH A 116 369 190 HOH HOH . D 3 HOH A 117 370 194 HOH HOH . D 3 HOH A 118 371 195 HOH HOH . D 3 HOH A 119 372 196 HOH HOH . D 3 HOH A 120 373 199 HOH HOH . D 3 HOH A 121 374 216 HOH HOH . D 3 HOH A 122 375 217 HOH HOH . D 3 HOH A 123 376 218 HOH HOH . D 3 HOH A 124 377 223 HOH HOH . D 3 HOH A 125 378 227 HOH HOH . D 3 HOH A 126 379 229 HOH HOH . D 3 HOH A 127 380 235 HOH HOH . D 3 HOH A 128 381 236 HOH HOH . D 3 HOH A 129 382 238 HOH HOH . D 3 HOH A 130 383 241 HOH HOH . D 3 HOH A 131 384 244 HOH HOH . D 3 HOH A 132 385 245 HOH HOH . D 3 HOH A 133 386 246 HOH HOH . D 3 HOH A 134 387 248 HOH HOH . E 3 HOH B 1 255 255 HOH HOH . E 3 HOH B 2 256 3 HOH HOH . E 3 HOH B 3 257 257 HOH HOH . E 3 HOH B 4 258 8 HOH HOH . E 3 HOH B 5 259 11 HOH HOH . E 3 HOH B 6 260 12 HOH HOH . E 3 HOH B 7 261 14 HOH HOH . E 3 HOH B 8 262 16 HOH HOH . E 3 HOH B 9 263 263 HOH HOH . E 3 HOH B 10 264 17 HOH HOH . E 3 HOH B 11 265 265 HOH HOH . E 3 HOH B 12 266 266 HOH HOH . E 3 HOH B 13 267 18 HOH HOH . E 3 HOH B 14 268 268 HOH HOH . E 3 HOH B 15 269 269 HOH HOH . E 3 HOH B 16 270 22 HOH HOH . E 3 HOH B 17 271 271 HOH HOH . E 3 HOH B 18 272 26 HOH HOH . E 3 HOH B 19 273 28 HOH HOH . E 3 HOH B 20 274 274 HOH HOH . E 3 HOH B 21 275 30 HOH HOH . E 3 HOH B 22 276 31 HOH HOH . E 3 HOH B 23 277 32 HOH HOH . E 3 HOH B 24 278 38 HOH HOH . E 3 HOH B 25 279 41 HOH HOH . E 3 HOH B 26 280 43 HOH HOH . E 3 HOH B 27 281 47 HOH HOH . E 3 HOH B 28 282 48 HOH HOH . E 3 HOH B 29 283 49 HOH HOH . E 3 HOH B 30 284 50 HOH HOH . E 3 HOH B 31 285 52 HOH HOH . E 3 HOH B 32 286 54 HOH HOH . E 3 HOH B 33 287 57 HOH HOH . E 3 HOH B 34 288 288 HOH HOH . E 3 HOH B 35 289 289 HOH HOH . E 3 HOH B 36 290 290 HOH HOH . E 3 HOH B 37 291 59 HOH HOH . E 3 HOH B 38 292 292 HOH HOH . E 3 HOH B 39 293 293 HOH HOH . E 3 HOH B 40 294 63 HOH HOH . E 3 HOH B 41 295 64 HOH HOH . E 3 HOH B 42 296 65 HOH HOH . E 3 HOH B 43 297 67 HOH HOH . E 3 HOH B 44 298 68 HOH HOH . E 3 HOH B 45 299 73 HOH HOH . E 3 HOH B 46 300 300 HOH HOH . E 3 HOH B 47 301 74 HOH HOH . E 3 HOH B 48 302 79 HOH HOH . E 3 HOH B 49 303 83 HOH HOH . E 3 HOH B 50 304 304 HOH HOH . E 3 HOH B 51 305 85 HOH HOH . E 3 HOH B 52 306 306 HOH HOH . E 3 HOH B 53 307 91 HOH HOH . E 3 HOH B 54 308 308 HOH HOH . E 3 HOH B 55 309 309 HOH HOH . E 3 HOH B 56 310 94 HOH HOH . E 3 HOH B 57 311 96 HOH HOH . E 3 HOH B 58 312 97 HOH HOH . E 3 HOH B 59 313 313 HOH HOH . E 3 HOH B 60 314 101 HOH HOH . E 3 HOH B 61 315 102 HOH HOH . E 3 HOH B 62 316 105 HOH HOH . E 3 HOH B 63 317 106 HOH HOH . E 3 HOH B 64 318 318 HOH HOH . E 3 HOH B 65 319 107 HOH HOH . E 3 HOH B 66 320 109 HOH HOH . E 3 HOH B 67 321 112 HOH HOH . E 3 HOH B 68 322 322 HOH HOH . E 3 HOH B 69 323 116 HOH HOH . E 3 HOH B 70 324 121 HOH HOH . E 3 HOH B 71 325 128 HOH HOH . E 3 HOH B 72 326 130 HOH HOH . E 3 HOH B 73 327 133 HOH HOH . E 3 HOH B 74 328 328 HOH HOH . E 3 HOH B 75 329 329 HOH HOH . E 3 HOH B 76 330 330 HOH HOH . E 3 HOH B 77 331 331 HOH HOH . E 3 HOH B 78 332 332 HOH HOH . E 3 HOH B 79 333 333 HOH HOH . E 3 HOH B 80 334 134 HOH HOH . E 3 HOH B 81 335 335 HOH HOH . E 3 HOH B 82 336 135 HOH HOH . E 3 HOH B 83 337 137 HOH HOH . E 3 HOH B 84 338 338 HOH HOH . E 3 HOH B 85 339 339 HOH HOH . E 3 HOH B 86 340 139 HOH HOH . E 3 HOH B 87 341 341 HOH HOH . E 3 HOH B 88 342 140 HOH HOH . E 3 HOH B 89 343 142 HOH HOH . E 3 HOH B 90 344 144 HOH HOH . E 3 HOH B 91 345 145 HOH HOH . E 3 HOH B 92 346 346 HOH HOH . E 3 HOH B 93 347 347 HOH HOH . E 3 HOH B 94 348 149 HOH HOH . E 3 HOH B 95 349 349 HOH HOH . E 3 HOH B 96 350 350 HOH HOH . E 3 HOH B 97 351 351 HOH HOH . E 3 HOH B 98 352 156 HOH HOH . E 3 HOH B 99 353 158 HOH HOH . E 3 HOH B 100 354 354 HOH HOH . E 3 HOH B 101 355 355 HOH HOH . E 3 HOH B 102 356 356 HOH HOH . E 3 HOH B 103 357 357 HOH HOH . E 3 HOH B 104 358 358 HOH HOH . E 3 HOH B 105 359 159 HOH HOH . E 3 HOH B 106 360 160 HOH HOH . E 3 HOH B 107 361 161 HOH HOH . E 3 HOH B 108 362 166 HOH HOH . E 3 HOH B 109 363 170 HOH HOH . E 3 HOH B 110 364 171 HOH HOH . E 3 HOH B 111 365 174 HOH HOH . E 3 HOH B 112 366 181 HOH HOH . E 3 HOH B 113 367 183 HOH HOH . E 3 HOH B 114 368 185 HOH HOH . E 3 HOH B 115 369 187 HOH HOH . E 3 HOH B 116 370 188 HOH HOH . E 3 HOH B 117 371 192 HOH HOH . E 3 HOH B 118 372 193 HOH HOH . E 3 HOH B 119 373 197 HOH HOH . E 3 HOH B 120 374 200 HOH HOH . E 3 HOH B 121 375 201 HOH HOH . E 3 HOH B 122 376 202 HOH HOH . E 3 HOH B 123 377 204 HOH HOH . E 3 HOH B 124 378 205 HOH HOH . E 3 HOH B 125 379 206 HOH HOH . E 3 HOH B 126 380 207 HOH HOH . E 3 HOH B 127 381 209 HOH HOH . E 3 HOH B 128 382 210 HOH HOH . E 3 HOH B 129 383 211 HOH HOH . E 3 HOH B 130 384 212 HOH HOH . E 3 HOH B 131 385 213 HOH HOH . E 3 HOH B 132 386 214 HOH HOH . E 3 HOH B 133 387 215 HOH HOH . E 3 HOH B 134 388 224 HOH HOH . E 3 HOH B 135 389 225 HOH HOH . E 3 HOH B 136 390 226 HOH HOH . E 3 HOH B 137 391 228 HOH HOH . E 3 HOH B 138 392 230 HOH HOH . E 3 HOH B 139 393 231 HOH HOH . E 3 HOH B 140 394 232 HOH HOH . E 3 HOH B 141 395 233 HOH HOH . E 3 HOH B 142 396 234 HOH HOH . E 3 HOH B 143 397 239 HOH HOH . E 3 HOH B 144 398 247 HOH HOH . E 3 HOH B 145 399 250 HOH HOH . E 3 HOH B 146 400 251 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.847 _atom_site.Cartn_y 8.815 _atom_site.Cartn_z 1.483 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 254 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #