data_3TLM # _model_server_result.job_id W2r6vkt1inT7h1Y3MXh7jg _model_server_result.datetime_utc '2024-11-05 00:58:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3tlm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1004}' # _entry.id 3TLM # _exptl.entry_id 3TLM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.3 _cell.angle_gamma 90 _cell.entry_id 3TLM _cell.length_a 156.58 _cell.length_b 75.26 _cell.length_c 151.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TLM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 304 A VAL 304 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.11 ? metalc ? metalc2 A O ALA 305 A ALA 305 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.824 ? metalc ? metalc3 A O ILE 307 A ILE 307 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc4 A OE2 GLU 309 A GLU 309 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc5 A OE1 GLU 309 A GLU 309 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? metalc ? metalc6 A OD1 ASP 351 A ASP 351 1_555 D MG MG . A MG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc7 A O THR 353 A THR 353 1_555 D MG MG . A MG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc8 A OD2 ASP 702 A ASP 702 1_555 D MG MG . A MG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc9 A OD1 ASP 702 A ASP 702 1_555 D MG MG . A MG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc10 A O LEU 710 A LEU 710 1_555 E K K . A K 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.074 ? metalc ? metalc11 A O LYS 711 A LYS 711 1_555 E K K . A K 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc12 A O ALA 713 A ALA 713 1_555 E K K . A K 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.111 ? metalc ? metalc13 A OE2 GLU 731 A GLU 731 1_555 E K K . A K 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? metalc ? metalc14 A OE1 GLU 731 A GLU 731 1_555 E K K . A K 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.299 ? metalc ? metalc15 A OD1 ASN 767 A ASN 767 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc16 A OE1 GLU 770 A GLU 770 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? metalc ? metalc17 A OD1 ASN 795 A ASN 795 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc18 A OG1 THR 798 A THR 798 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.867 ? metalc ? metalc19 A OD1 ASP 799 A ASP 799 1_555 B CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc20 A OD2 ASP 799 A ASP 799 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc21 A OE2 GLU 907 A GLU 907 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.03 ? metalc ? metalc22 A OE1 GLU 907 A GLU 907 1_555 C CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc23 F O3G ACP . A ACP 1001 1_555 D MG MG . A MG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc24 C CA CA . A CA 1004 1_555 G O HOH . A HOH 1028 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc25 D MG MG . A MG 1005 1_555 G O HOH . A HOH 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc26 D MG MG . A MG 1005 1_555 G O HOH . A HOH 1012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc27 E K K . A K 1006 1_555 G O HOH . A HOH 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.235 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TLM _atom_sites.fract_transf_matrix[1][1] 0.006387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013287 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1003 1003 CA CA . C 2 CA A 1 1004 1004 CA CA . D 3 MG A 1 1005 1005 MG MG . E 4 K A 1 1006 1006 K K . F 5 ACP A 1 1001 1001 ACP ACP . G 6 HOH A 1 993 1 HOH HOH . G 6 HOH A 2 994 2 HOH HOH . G 6 HOH A 3 995 3 HOH HOH . G 6 HOH A 4 996 4 HOH HOH . G 6 HOH A 5 997 5 HOH HOH . G 6 HOH A 6 998 6 HOH HOH . G 6 HOH A 7 999 7 HOH HOH . G 6 HOH A 8 1000 8 HOH HOH . G 6 HOH A 9 1002 9 HOH HOH . G 6 HOH A 10 1007 10 HOH HOH . G 6 HOH A 11 1008 11 HOH HOH . G 6 HOH A 12 1009 12 HOH HOH . G 6 HOH A 13 1010 13 HOH HOH . G 6 HOH A 14 1011 14 HOH HOH . G 6 HOH A 15 1012 15 HOH HOH . G 6 HOH A 16 1013 16 HOH HOH . G 6 HOH A 17 1014 17 HOH HOH . G 6 HOH A 18 1015 18 HOH HOH . G 6 HOH A 19 1016 19 HOH HOH . G 6 HOH A 20 1017 20 HOH HOH . G 6 HOH A 21 1018 21 HOH HOH . G 6 HOH A 22 1019 22 HOH HOH . G 6 HOH A 23 1020 23 HOH HOH . G 6 HOH A 24 1021 24 HOH HOH . G 6 HOH A 25 1022 25 HOH HOH . G 6 HOH A 26 1023 26 HOH HOH . G 6 HOH A 27 1024 27 HOH HOH . G 6 HOH A 28 1025 28 HOH HOH . G 6 HOH A 29 1026 29 HOH HOH . G 6 HOH A 30 1027 30 HOH HOH . G 6 HOH A 31 1028 31 HOH HOH . G 6 HOH A 32 1029 32 HOH HOH . G 6 HOH A 33 1030 33 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.234 _atom_site.Cartn_y 0.865 _atom_site.Cartn_z -69.599 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #