data_3TMW
#
_model_server_result.job_id            JoufnXbfEviDCbyDS8P6vw 
_model_server_result.datetime_utc      '2024-11-14 17:55:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3tmw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1138}' 
#
_entry.id    3TMW 
#
_exptl.entry_id    3TMW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3TMW 
_cell.length_a            79.55 
_cell.length_b            79.55 
_cell.length_c            37.611 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3TMW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1 
A,B,C,D,E,F,G,H,I,J,K 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 6 1_555 A SG CYS 145 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf2 A SG CYS 48 A CYS 30 1_555 A SG CYS 133 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf3 A SG CYS 82 A CYS 64 1_555 A SG CYS 98 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf4 A SG CYS 94 A CYS 76 1_555 A SG CYS 112 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc1 J NA NA . A NA 1138 1_555 K O HOH . A HOH 2076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc2 A O CYS 82 A CYS 64 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc3 A O SER 78 A SER 60 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc4 J NA NA . A NA 1138 1_555 K O HOH . A HOH 2081 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc5 A O ARG 91 A ARG 73 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc6 A OG SER 90 A SER 72 1_555 J NA NA . A NA 1138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3TMW 
_atom_sites.fract_transf_matrix[1][1]    0.012571 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012571 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 1130 1130 CL CL . 
C 2 CL A 1 1131 1131 CL CL . 
D 2 CL A 1 1132 1132 CL CL . 
E 2 CL A 1 1133 1133 CL CL . 
F 2 CL A 1 1134 1134 CL CL . 
G 2 CL A 1 1135 1135 CL CL . 
H 2 CL A 1 1136 1136 CL CL . 
I 2 CL A 1 1137 1137 CL CL . 
J 3 NA A 1 1138 1138 NA NA . 
K 4 HOH A 1 2001 2001 HOH HOH . 
K 4 HOH A 2 2002 2002 HOH HOH . 
K 4 HOH A 3 2003 2003 HOH HOH . 
K 4 HOH A 4 2004 2004 HOH HOH . 
K 4 HOH A 5 2005 2005 HOH HOH . 
K 4 HOH A 6 2006 2006 HOH HOH . 
K 4 HOH A 7 2008 2008 HOH HOH . 
K 4 HOH A 8 2009 2009 HOH HOH . 
K 4 HOH A 9 2010 2010 HOH HOH . 
K 4 HOH A 10 2011 2011 HOH HOH . 
K 4 HOH A 11 2012 2012 HOH HOH . 
K 4 HOH A 12 2013 2013 HOH HOH . 
K 4 HOH A 13 2014 2014 HOH HOH . 
K 4 HOH A 14 2015 2015 HOH HOH . 
K 4 HOH A 15 2016 2016 HOH HOH . 
K 4 HOH A 16 2017 2017 HOH HOH . 
K 4 HOH A 17 2018 2018 HOH HOH . 
K 4 HOH A 18 2019 2019 HOH HOH . 
K 4 HOH A 19 2020 2020 HOH HOH . 
K 4 HOH A 20 2021 2021 HOH HOH . 
K 4 HOH A 21 2022 2022 HOH HOH . 
K 4 HOH A 22 2024 2024 HOH HOH . 
K 4 HOH A 23 2026 2026 HOH HOH . 
K 4 HOH A 24 2027 2027 HOH HOH . 
K 4 HOH A 25 2028 2028 HOH HOH . 
K 4 HOH A 26 2031 2031 HOH HOH . 
K 4 HOH A 27 2032 2032 HOH HOH . 
K 4 HOH A 28 2033 2033 HOH HOH . 
K 4 HOH A 29 2034 2034 HOH HOH . 
K 4 HOH A 30 2035 2035 HOH HOH . 
K 4 HOH A 31 2036 2036 HOH HOH . 
K 4 HOH A 32 2037 2037 HOH HOH . 
K 4 HOH A 33 2038 2038 HOH HOH . 
K 4 HOH A 34 2039 2039 HOH HOH . 
K 4 HOH A 35 2040 2040 HOH HOH . 
K 4 HOH A 36 2042 2042 HOH HOH . 
K 4 HOH A 37 2043 2043 HOH HOH . 
K 4 HOH A 38 2044 2044 HOH HOH . 
K 4 HOH A 39 2045 2045 HOH HOH . 
K 4 HOH A 40 2046 2046 HOH HOH . 
K 4 HOH A 41 2047 2047 HOH HOH . 
K 4 HOH A 42 2048 2048 HOH HOH . 
K 4 HOH A 43 2049 2049 HOH HOH . 
K 4 HOH A 44 2050 2050 HOH HOH . 
K 4 HOH A 45 2051 2051 HOH HOH . 
K 4 HOH A 46 2052 2052 HOH HOH . 
K 4 HOH A 47 2053 2053 HOH HOH . 
K 4 HOH A 48 2054 2054 HOH HOH . 
K 4 HOH A 49 2055 2055 HOH HOH . 
K 4 HOH A 50 2056 2056 HOH HOH . 
K 4 HOH A 51 2058 2058 HOH HOH . 
K 4 HOH A 52 2059 2059 HOH HOH . 
K 4 HOH A 53 2060 2060 HOH HOH . 
K 4 HOH A 54 2061 2061 HOH HOH . 
K 4 HOH A 55 2062 2062 HOH HOH . 
K 4 HOH A 56 2063 2063 HOH HOH . 
K 4 HOH A 57 2064 2064 HOH HOH . 
K 4 HOH A 58 2065 2065 HOH HOH . 
K 4 HOH A 59 2066 2066 HOH HOH . 
K 4 HOH A 60 2067 2067 HOH HOH . 
K 4 HOH A 61 2068 2068 HOH HOH . 
K 4 HOH A 62 2069 2069 HOH HOH . 
K 4 HOH A 63 2071 2071 HOH HOH . 
K 4 HOH A 64 2072 2072 HOH HOH . 
K 4 HOH A 65 2073 2073 HOH HOH . 
K 4 HOH A 66 2074 2074 HOH HOH . 
K 4 HOH A 67 2075 2075 HOH HOH . 
K 4 HOH A 68 2076 2076 HOH HOH . 
K 4 HOH A 69 2077 2077 HOH HOH . 
K 4 HOH A 70 2078 2078 HOH HOH . 
K 4 HOH A 71 2079 2079 HOH HOH . 
K 4 HOH A 72 2081 2081 HOH HOH . 
K 4 HOH A 73 2082 2082 HOH HOH . 
K 4 HOH A 74 2083 2083 HOH HOH . 
K 4 HOH A 75 2084 2084 HOH HOH . 
K 4 HOH A 76 2085 2085 HOH HOH . 
K 4 HOH A 77 2086 2086 HOH HOH . 
K 4 HOH A 78 2087 2087 HOH HOH . 
K 4 HOH A 79 2088 2088 HOH HOH . 
K 4 HOH A 80 2089 2089 HOH HOH . 
K 4 HOH A 81 2090 2090 HOH HOH . 
K 4 HOH A 82 2091 2091 HOH HOH . 
K 4 HOH A 83 2092 2092 HOH HOH . 
K 4 HOH A 84 2093 2093 HOH HOH . 
K 4 HOH A 85 2094 2094 HOH HOH . 
K 4 HOH A 86 2095 2095 HOH HOH . 
K 4 HOH A 87 2096 2096 HOH HOH . 
K 4 HOH A 88 2097 2097 HOH HOH . 
K 4 HOH A 89 2098 2098 HOH HOH . 
K 4 HOH A 90 2099 2099 HOH HOH . 
K 4 HOH A 91 2100 2100 HOH HOH . 
K 4 HOH A 92 2101 2101 HOH HOH . 
K 4 HOH A 93 2102 2102 HOH HOH . 
K 4 HOH A 94 2103 2103 HOH HOH . 
K 4 HOH A 95 2104 2104 HOH HOH . 
K 4 HOH A 96 2105 2105 HOH HOH . 
K 4 HOH A 97 2106 2106 HOH HOH . 
K 4 HOH A 98 2107 2107 HOH HOH . 
K 4 HOH A 99 2108 2108 HOH HOH . 
K 4 HOH A 100 2109 2109 HOH HOH . 
K 4 HOH A 101 2110 2110 HOH HOH . 
K 4 HOH A 102 2111 2111 HOH HOH . 
K 4 HOH A 103 2112 2112 HOH HOH . 
K 4 HOH A 104 2113 2113 HOH HOH . 
K 4 HOH A 105 2114 2114 HOH HOH . 
K 4 HOH A 106 2115 2115 HOH HOH . 
K 4 HOH A 107 2116 2116 HOH HOH . 
K 4 HOH A 108 2117 2117 HOH HOH . 
K 4 HOH A 109 2118 2118 HOH HOH . 
K 4 HOH A 110 2119 2119 HOH HOH . 
K 4 HOH A 111 2120 2120 HOH HOH . 
K 4 HOH A 112 2121 2121 HOH HOH . 
K 4 HOH A 113 2122 2122 HOH HOH . 
K 4 HOH A 114 2123 2123 HOH HOH . 
K 4 HOH A 115 2124 2124 HOH HOH . 
K 4 HOH A 116 2125 2125 HOH HOH . 
K 4 HOH A 117 2127 2127 HOH HOH . 
K 4 HOH A 118 2128 2128 HOH HOH . 
K 4 HOH A 119 2129 2129 HOH HOH . 
K 4 HOH A 120 2130 2130 HOH HOH . 
K 4 HOH A 121 2131 2131 HOH HOH . 
K 4 HOH A 122 2134 2134 HOH HOH . 
K 4 HOH A 123 2135 2135 HOH HOH . 
K 4 HOH A 124 2136 2136 HOH HOH . 
K 4 HOH A 125 2137 2137 HOH HOH . 
K 4 HOH A 126 2138 2138 HOH HOH . 
K 4 HOH A 127 2139 2139 HOH HOH . 
K 4 HOH A 128 2140 2140 HOH HOH . 
K 4 HOH A 129 2141 2141 HOH HOH . 
K 4 HOH A 130 2142 2142 HOH HOH . 
K 4 HOH A 131 2143 2143 HOH HOH . 
K 4 HOH A 132 2144 2144 HOH HOH . 
K 4 HOH A 133 2145 2145 HOH HOH . 
K 4 HOH A 134 2146 2146 HOH HOH . 
K 4 HOH A 135 2147 2147 HOH HOH . 
K 4 HOH A 136 2148 2148 HOH HOH . 
K 4 HOH A 137 2149 2149 HOH HOH . 
K 4 HOH A 138 2150 2150 HOH HOH . 
K 4 HOH A 139 2151 2151 HOH HOH . 
K 4 HOH A 140 2152 2152 HOH HOH . 
K 4 HOH A 141 2153 2153 HOH HOH . 
K 4 HOH A 142 2154 2154 HOH HOH . 
K 4 HOH A 143 2155 2155 HOH HOH . 
K 4 HOH A 144 2156 2156 HOH HOH . 
K 4 HOH A 145 2157 2157 HOH HOH . 
K 4 HOH A 146 2158 2158 HOH HOH . 
K 4 HOH A 147 2159 2159 HOH HOH . 
K 4 HOH A 148 2160 2160 HOH HOH . 
K 4 HOH A 149 2161 2161 HOH HOH . 
K 4 HOH A 150 2162 2162 HOH HOH . 
K 4 HOH A 151 2163 2163 HOH HOH . 
K 4 HOH A 152 2164 2164 HOH HOH . 
K 4 HOH A 153 2165 2165 HOH HOH . 
K 4 HOH A 154 2166 2166 HOH HOH . 
K 4 HOH A 155 2167 2167 HOH HOH . 
K 4 HOH A 156 2168 2168 HOH HOH . 
K 4 HOH A 157 2169 2169 HOH HOH . 
K 4 HOH A 158 2170 2170 HOH HOH . 
K 4 HOH A 159 2171 2171 HOH HOH . 
K 4 HOH A 160 2172 2172 HOH HOH . 
K 4 HOH A 161 2173 2173 HOH HOH . 
K 4 HOH A 162 2174 2174 HOH HOH . 
K 4 HOH A 163 2175 2175 HOH HOH . 
K 4 HOH A 164 2176 2176 HOH HOH . 
K 4 HOH A 165 2177 2177 HOH HOH . 
K 4 HOH A 166 2178 2178 HOH HOH . 
K 4 HOH A 167 2179 2179 HOH HOH . 
K 4 HOH A 168 2180 2180 HOH HOH . 
K 4 HOH A 169 2181 2181 HOH HOH . 
K 4 HOH A 170 2182 2182 HOH HOH . 
K 4 HOH A 171 2183 2183 HOH HOH . 
K 4 HOH A 172 2184 2184 HOH HOH . 
K 4 HOH A 173 2185 2185 HOH HOH . 
K 4 HOH A 174 2186 2186 HOH HOH . 
K 4 HOH A 175 2187 2187 HOH HOH . 
K 4 HOH A 176 2188 2188 HOH HOH . 
K 4 HOH A 177 2189 2189 HOH HOH . 
K 4 HOH A 178 2190 2190 HOH HOH . 
K 4 HOH A 179 2191 2191 HOH HOH . 
K 4 HOH A 180 2192 2192 HOH HOH . 
K 4 HOH A 181 2193 2193 HOH HOH . 
K 4 HOH A 182 2194 2194 HOH HOH . 
K 4 HOH A 183 2195 2195 HOH HOH . 
K 4 HOH A 184 2196 2196 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -7.928 
_atom_site.Cartn_y               -14.152 
_atom_site.Cartn_z               12.93 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        18.72 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1138 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#