data_3TO0 # _model_server_result.job_id nRYN-9FM4k055cvC3vaRVA _model_server_result.datetime_utc '2024-11-01 12:25:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3to0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 3TO0 # _exptl.entry_id 3TO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TO0 _cell.length_a 87.27 _cell.length_b 87.27 _cell.length_c 62.725 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 320 n n P O2 PO4 sing 321 n n P O3 PO4 sing 322 n n P O4 PO4 sing 323 n n # _atom_sites.entry_id 3TO0 _atom_sites.fract_transf_matrix[1][1] 0.011459 _atom_sites.fract_transf_matrix[1][2] 0.006616 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 301 301 FMN FMN . D 3 PO4 A 1 303 303 PO4 PO4 . E 4 ACT A 1 302 302 ACT ACT . F 4 ACT B 1 302 302 ACT ACT . G 2 FMN B 1 301 301 FMN FMN . H 3 PO4 B 1 303 303 PO4 PO4 . I 5 HOH A 1 1 1 HOH HOH . I 5 HOH A 2 4 4 HOH HOH . I 5 HOH A 3 5 5 HOH HOH . I 5 HOH A 4 7 7 HOH HOH . I 5 HOH A 5 8 8 HOH HOH . I 5 HOH A 6 10 10 HOH HOH . I 5 HOH A 7 15 15 HOH HOH . I 5 HOH A 8 16 16 HOH HOH . I 5 HOH A 9 17 17 HOH HOH . I 5 HOH A 10 20 20 HOH HOH . I 5 HOH A 11 21 21 HOH HOH . I 5 HOH A 12 22 22 HOH HOH . I 5 HOH A 13 24 24 HOH HOH . I 5 HOH A 14 25 25 HOH HOH . I 5 HOH A 15 26 26 HOH HOH . I 5 HOH A 16 292 33 HOH HOH . I 5 HOH A 17 293 34 HOH HOH . I 5 HOH A 18 294 36 HOH HOH . I 5 HOH A 19 295 37 HOH HOH . I 5 HOH A 20 296 38 HOH HOH . I 5 HOH A 21 297 39 HOH HOH . I 5 HOH A 22 298 44 HOH HOH . I 5 HOH A 23 299 45 HOH HOH . I 5 HOH A 24 300 46 HOH HOH . I 5 HOH A 25 304 47 HOH HOH . I 5 HOH A 26 305 48 HOH HOH . I 5 HOH A 27 306 49 HOH HOH . I 5 HOH A 28 307 50 HOH HOH . J 5 HOH B 1 2 2 HOH HOH . J 5 HOH B 2 3 3 HOH HOH . J 5 HOH B 3 6 6 HOH HOH . J 5 HOH B 4 9 9 HOH HOH . J 5 HOH B 5 11 11 HOH HOH . J 5 HOH B 6 12 12 HOH HOH . J 5 HOH B 7 13 13 HOH HOH . J 5 HOH B 8 14 14 HOH HOH . J 5 HOH B 9 18 18 HOH HOH . J 5 HOH B 10 19 19 HOH HOH . J 5 HOH B 11 23 23 HOH HOH . J 5 HOH B 12 27 27 HOH HOH . J 5 HOH B 13 28 28 HOH HOH . J 5 HOH B 14 29 29 HOH HOH . J 5 HOH B 15 30 30 HOH HOH . J 5 HOH B 16 31 31 HOH HOH . J 5 HOH B 17 32 32 HOH HOH . J 5 HOH B 18 292 35 HOH HOH . J 5 HOH B 19 293 40 HOH HOH . J 5 HOH B 20 294 41 HOH HOH . J 5 HOH B 21 295 42 HOH HOH . J 5 HOH B 22 296 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 -3.162 9.401 12.167 1 39.54 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . D 3 -3.261 10.833 11.708 1 47.96 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . D 3 -4.289 8.567 11.612 1 34.86 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . D 3 -1.866 8.806 11.677 1 26.38 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . D 3 -3.269 9.367 13.675 1 48.33 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #