data_3TO5 # _model_server_result.job_id a_oTyY9xgUyPx7iRm9eOwA _model_server_result.datetime_utc '2024-10-14 17:17:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3to5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":131}' # _entry.id 3TO5 # _exptl.entry_id 3TO5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3TO5 _cell.length_a 68.057 _cell.length_b 68.057 _cell.length_c 75.75 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3TO5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 19 A ASP 15 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc2 A OD1 ASP 20 A ASP 16 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc3 A OD2 ASP 64 A ASP 60 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc4 A O ASN 66 A ASN 62 1_555 B CA CA . A CA 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc5 B CA CA . A CA 131 1_555 C O HOH . A HOH 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc6 B CA CA . A CA 131 1_555 C O HOH . A HOH 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc7 B CA CA . A CA 131 1_555 C O HOH . A HOH 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3TO5 _atom_sites.fract_transf_matrix[1][1] 0.014694 _atom_sites.fract_transf_matrix[1][2] 0.008483 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016967 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 131 129 CA CA . C 3 HOH A 1 132 132 HOH HOH . C 3 HOH A 2 133 133 HOH HOH . C 3 HOH A 3 134 134 HOH HOH . C 3 HOH A 4 135 135 HOH HOH . C 3 HOH A 5 136 136 HOH HOH . C 3 HOH A 6 137 137 HOH HOH . C 3 HOH A 7 138 138 HOH HOH . C 3 HOH A 8 139 139 HOH HOH . C 3 HOH A 9 140 140 HOH HOH . C 3 HOH A 10 141 141 HOH HOH . C 3 HOH A 11 142 142 HOH HOH . C 3 HOH A 12 143 143 HOH HOH . C 3 HOH A 13 144 144 HOH HOH . C 3 HOH A 14 145 145 HOH HOH . C 3 HOH A 15 146 146 HOH HOH . C 3 HOH A 16 147 130 HOH HOH . C 3 HOH A 17 148 148 HOH HOH . C 3 HOH A 18 149 149 HOH HOH . C 3 HOH A 19 150 150 HOH HOH . C 3 HOH A 20 151 151 HOH HOH . C 3 HOH A 21 152 152 HOH HOH . C 3 HOH A 22 153 153 HOH HOH . C 3 HOH A 23 154 154 HOH HOH . C 3 HOH A 24 155 155 HOH HOH . C 3 HOH A 25 156 156 HOH HOH . C 3 HOH A 26 157 157 HOH HOH . C 3 HOH A 27 158 158 HOH HOH . C 3 HOH A 28 159 159 HOH HOH . C 3 HOH A 29 160 160 HOH HOH . C 3 HOH A 30 161 161 HOH HOH . C 3 HOH A 31 162 162 HOH HOH . C 3 HOH A 32 163 163 HOH HOH . C 3 HOH A 33 164 164 HOH HOH . C 3 HOH A 34 165 165 HOH HOH . C 3 HOH A 35 166 166 HOH HOH . C 3 HOH A 36 167 167 HOH HOH . C 3 HOH A 37 168 168 HOH HOH . C 3 HOH A 38 169 169 HOH HOH . C 3 HOH A 39 170 170 HOH HOH . C 3 HOH A 40 171 171 HOH HOH . C 3 HOH A 41 172 172 HOH HOH . C 3 HOH A 42 173 173 HOH HOH . C 3 HOH A 43 174 174 HOH HOH . C 3 HOH A 44 175 175 HOH HOH . C 3 HOH A 45 176 176 HOH HOH . C 3 HOH A 46 177 177 HOH HOH . C 3 HOH A 47 178 178 HOH HOH . C 3 HOH A 48 179 179 HOH HOH . C 3 HOH A 49 180 180 HOH HOH . C 3 HOH A 50 181 181 HOH HOH . C 3 HOH A 51 182 182 HOH HOH . C 3 HOH A 52 183 183 HOH HOH . C 3 HOH A 53 184 184 HOH HOH . C 3 HOH A 54 185 185 HOH HOH . C 3 HOH A 55 186 186 HOH HOH . C 3 HOH A 56 187 187 HOH HOH . C 3 HOH A 57 188 188 HOH HOH . C 3 HOH A 58 189 189 HOH HOH . C 3 HOH A 59 190 190 HOH HOH . C 3 HOH A 60 191 191 HOH HOH . C 3 HOH A 61 192 192 HOH HOH . C 3 HOH A 62 193 193 HOH HOH . C 3 HOH A 63 194 194 HOH HOH . C 3 HOH A 64 195 195 HOH HOH . C 3 HOH A 65 196 131 HOH HOH . C 3 HOH A 66 197 197 HOH HOH . C 3 HOH A 67 198 198 HOH HOH . C 3 HOH A 68 199 199 HOH HOH . C 3 HOH A 69 200 200 HOH HOH . C 3 HOH A 70 201 201 HOH HOH . C 3 HOH A 71 202 202 HOH HOH . C 3 HOH A 72 203 203 HOH HOH . C 3 HOH A 73 204 204 HOH HOH . C 3 HOH A 74 205 205 HOH HOH . C 3 HOH A 75 206 206 HOH HOH . C 3 HOH A 76 207 207 HOH HOH . C 3 HOH A 77 208 208 HOH HOH . C 3 HOH A 78 209 209 HOH HOH . C 3 HOH A 79 211 211 HOH HOH . C 3 HOH A 80 212 212 HOH HOH . C 3 HOH A 81 213 213 HOH HOH . C 3 HOH A 82 214 214 HOH HOH . C 3 HOH A 83 215 215 HOH HOH . C 3 HOH A 84 216 216 HOH HOH . C 3 HOH A 85 217 217 HOH HOH . C 3 HOH A 86 218 218 HOH HOH . C 3 HOH A 87 219 219 HOH HOH . C 3 HOH A 88 220 220 HOH HOH . C 3 HOH A 89 221 221 HOH HOH . C 3 HOH A 90 222 222 HOH HOH . C 3 HOH A 91 223 223 HOH HOH . C 3 HOH A 92 224 224 HOH HOH . C 3 HOH A 93 225 225 HOH HOH . C 3 HOH A 94 226 226 HOH HOH . C 3 HOH A 95 227 227 HOH HOH . C 3 HOH A 96 228 228 HOH HOH . C 3 HOH A 97 229 229 HOH HOH . C 3 HOH A 98 231 231 HOH HOH . C 3 HOH A 99 232 232 HOH HOH . C 3 HOH A 100 233 233 HOH HOH . C 3 HOH A 101 234 234 HOH HOH . C 3 HOH A 102 235 235 HOH HOH . C 3 HOH A 103 236 236 HOH HOH . C 3 HOH A 104 237 237 HOH HOH . C 3 HOH A 105 238 238 HOH HOH . C 3 HOH A 106 239 239 HOH HOH . C 3 HOH A 107 240 240 HOH HOH . C 3 HOH A 108 241 241 HOH HOH . C 3 HOH A 109 242 242 HOH HOH . C 3 HOH A 110 244 244 HOH HOH . C 3 HOH A 111 245 245 HOH HOH . C 3 HOH A 112 246 246 HOH HOH . C 3 HOH A 113 247 247 HOH HOH . C 3 HOH A 114 249 249 HOH HOH . C 3 HOH A 115 251 251 HOH HOH . C 3 HOH A 116 252 252 HOH HOH . C 3 HOH A 117 255 255 HOH HOH . C 3 HOH A 118 256 256 HOH HOH . C 3 HOH A 119 257 257 HOH HOH . C 3 HOH A 120 258 258 HOH HOH . C 3 HOH A 121 259 259 HOH HOH . C 3 HOH A 122 260 260 HOH HOH . C 3 HOH A 123 263 263 HOH HOH . C 3 HOH A 124 265 265 HOH HOH . C 3 HOH A 125 266 266 HOH HOH . C 3 HOH A 126 267 267 HOH HOH . C 3 HOH A 127 268 268 HOH HOH . C 3 HOH A 128 269 269 HOH HOH . C 3 HOH A 129 270 270 HOH HOH . C 3 HOH A 130 271 271 HOH HOH . C 3 HOH A 131 272 272 HOH HOH . C 3 HOH A 132 273 273 HOH HOH . C 3 HOH A 133 274 274 HOH HOH . C 3 HOH A 134 277 277 HOH HOH . C 3 HOH A 135 278 278 HOH HOH . C 3 HOH A 136 279 279 HOH HOH . C 3 HOH A 137 280 280 HOH HOH . C 3 HOH A 138 281 281 HOH HOH . C 3 HOH A 139 282 282 HOH HOH . C 3 HOH A 140 284 284 HOH HOH . C 3 HOH A 141 285 285 HOH HOH . C 3 HOH A 142 287 287 HOH HOH . C 3 HOH A 143 288 288 HOH HOH . C 3 HOH A 144 289 289 HOH HOH . C 3 HOH A 145 291 291 HOH HOH . C 3 HOH A 146 292 292 HOH HOH . C 3 HOH A 147 293 293 HOH HOH . C 3 HOH A 148 294 294 HOH HOH . C 3 HOH A 149 295 295 HOH HOH . C 3 HOH A 150 296 296 HOH HOH . C 3 HOH A 151 297 297 HOH HOH . C 3 HOH A 152 298 298 HOH HOH . C 3 HOH A 153 299 299 HOH HOH . C 3 HOH A 154 300 300 HOH HOH . C 3 HOH A 155 301 301 HOH HOH . C 3 HOH A 156 302 302 HOH HOH . C 3 HOH A 157 303 303 HOH HOH . C 3 HOH A 158 304 304 HOH HOH . C 3 HOH A 159 305 305 HOH HOH . C 3 HOH A 160 306 306 HOH HOH . C 3 HOH A 161 307 307 HOH HOH . C 3 HOH A 162 308 308 HOH HOH . C 3 HOH A 163 309 309 HOH HOH . C 3 HOH A 164 310 310 HOH HOH . C 3 HOH A 165 312 312 HOH HOH . C 3 HOH A 166 313 313 HOH HOH . C 3 HOH A 167 314 314 HOH HOH . C 3 HOH A 168 315 315 HOH HOH . C 3 HOH A 169 316 316 HOH HOH . C 3 HOH A 170 317 317 HOH HOH . C 3 HOH A 171 319 319 HOH HOH . C 3 HOH A 172 320 320 HOH HOH . C 3 HOH A 173 321 321 HOH HOH . C 3 HOH A 174 322 322 HOH HOH . C 3 HOH A 175 323 323 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.925 _atom_site.Cartn_y 12.842 _atom_site.Cartn_z 6.737 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 131 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #